RNA–Protein interactions for RNA: ENST00000468621.5

SND1-207, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-207ENST00000468621 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
SND1-207ENST00000468621 CCDC180Q9P1Z9 1646 aa11.68□□□□□ -0.54
SND1-207ENST00000468621 ABCC9O60706 1549 aa11.38□□□□□ -0.59
SND1-207ENST00000468621 RB1CC1Q8TDY2 1594 aa10.95□□□□□ -0.66
SND1-207ENST00000468621 NACADO15069 1562 aa10.93□□□□□ -0.66
SND1-207ENST00000468621 UNC13AQ9UPW8 1703 aa10.88□□□□□ -0.67
SND1-207ENST00000468621 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
SND1-207ENST00000468621 MYO15BQ96JP2 1530 aa10.85□□□□□ -0.67
SND1-207ENST00000468621 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
SND1-207ENST00000468621 DCAF8L2P0C7V8 631 aa10.8□□□□□ -0.68
SND1-207ENST00000468621 DCAF1Q9Y4B6 1507 aa10.79□□□□□ -0.68
SND1-207ENST00000468621 BICRAQ9NZM4 1560 aa10.67□□□□□ -0.7
SND1-207ENST00000468621 SCRIBQ14160 1630 aa10.62□□□□□ -0.71
SND1-207ENST00000468621 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
SND1-207ENST00000468621 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
SND1-207ENST00000468621 DNAJC5Q9H3Z4 198 aa10.4□□□□□ -0.74
SND1-207ENST00000468621 EIF4G1Q04637 1599 aaKnown RBP10.36□□□□□ -0.75
SND1-207ENST00000468621 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
SND1-207ENST00000468621 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
SND1-207ENST00000468621 SMARCA4P51532 1647 aa10.16□□□□□ -0.78
SND1-207ENST00000468621 BAZ1AQ9NRL2 1556 aaPredicted RBP10.1□□□□□ -0.79
SND1-207ENST00000468621 SMARCA2P51531 1590 aa10.06□□□□□ -0.8
SND1-207ENST00000468621 PEG3Q9GZU2 1588 aa10.06□□□□□ -0.8
SND1-207ENST00000468621 ATAD2BQ9ULI0 1458 aa10.06□□□□□ -0.8
SND1-207ENST00000468621 MROH2BQ7Z745 1585 aa10.05□□□□□ -0.8
SND1-207ENST00000468621 NCAPD3P42695 1498 aa10.05□□□□□ -0.8
SND1-207ENST00000468621 HMGXB3Q12766 1538 aa10.04□□□□□ -0.8
SND1-207ENST00000468621 WIZO95785 1651 aa9.99□□□□□ -0.81
SND1-207ENST00000468621 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
SND1-207ENST00000468621 RSF1Q96T23 1441 aaPredicted RBP9.89□□□□□ -0.83
SND1-207ENST00000468621 NESP48681 1621 aa9.85□□□□□ -0.83
SND1-207ENST00000468621 TOP2AP11388 1531 aaKnown RBP9.84□□□□□ -0.83
SND1-207ENST00000468621 LAMC3Q9Y6N6 1575 aa9.84□□□□□ -0.83
SND1-207ENST00000468621 KIF21AQ7Z4S6 1674 aa9.83□□□□□ -0.84
SND1-207ENST00000468621 CUX2O14529 1486 aa9.8□□□□□ -0.84
SND1-207ENST00000468621 PRDM2Q13029 1718 aa9.8□□□□□ -0.84
SND1-207ENST00000468621 ERCC6Q03468 1493 aa9.79□□□□□ -0.84
SND1-207ENST00000468621 THOC2Q8NI27 1593 aaKnown RBP9.77□□□□□ -0.85
SND1-207ENST00000468621 CADPSQ9ULU8 1353 aa9.74□□□□□ -0.85
SND1-207ENST00000468621 TRIM41Q8WV44 630 aa9.7□□□□□ -0.86
SND1-207ENST00000468621 PDS5BQ9NTI5 1447 aa9.7□□□□□ -0.86
SND1-207ENST00000468621 CCDC88BA6NC98 1476 aa9.7□□□□□ -0.86
SND1-207ENST00000468621 CFTRP13569 1480 aa9.7□□□□□ -0.86
SND1-207ENST00000468621 FANCD2Q9BXW9 1451 aa9.65□□□□□ -0.87
SND1-207ENST00000468621 CEP164Q9UPV0 1460 aa9.65□□□□□ -0.87
SND1-207ENST00000468621 WDR62O43379 1518 aa9.64□□□□□ -0.87
SND1-207ENST00000468621 MRC2Q9UBG0 1479 aa9.64□□□□□ -0.87
SND1-207ENST00000468621 URB2Q14146 1524 aaKnown RBP9.58□□□□□ -0.88
SND1-207ENST00000468621 SUPT5HO00267 1087 aaKnown RBP9.55□□□□□ -0.88
SND1-207ENST00000468621 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.89
SND1-207ENST00000468621 TOPBP1Q92547 1522 aa9.51□□□□□ -0.89
SND1-207ENST00000468621 ABCC8Q09428 1581 aa9.48□□□□□ -0.89
SND1-207ENST00000468621 TARBP1Q13395 1621 aaKnown RBP9.46□□□□□ -0.89
SND1-207ENST00000468621 AEBP2Q6ZN18 517 aaPredicted RBP9.45□□□□□ -0.9
SND1-207ENST00000468621 CUX1P39880 1505 aa9.44□□□□□ -0.9
SND1-207ENST00000468621 EIF4G3O43432 1585 aaKnown RBP9.43□□□□□ -0.9
SND1-207ENST00000468621 ZNF608Q9ULD9 1512 aaPredicted RBP9.43□□□□□ -0.9
SND1-207ENST00000468621 IFT140Q96RY7 1462 aa9.43□□□□□ -0.9
SND1-207ENST00000468621 WDR97A6NE52 1622 aa9.42□□□□□ -0.9
SND1-207ENST00000468621 POLA1P09884 1462 aaPredicted RBP9.42□□□□□ -0.9
SND1-207ENST00000468621 BIVM-ERCC5R4GMW8 1640 aa9.4□□□□□ -0.9
SND1-207ENST00000468621 FGD5Q6ZNL6 1462 aa9.4□□□□□ -0.91
SND1-207ENST00000468621 CHD1O14646 1710 aa9.38□□□□□ -0.91
SND1-207ENST00000468621 RAD54L2Q9Y4B4 1467 aa9.37□□□□□ -0.91
SND1-207ENST00000468621 TOP2BQ02880 1626 aa9.37□□□□□ -0.91
SND1-207ENST00000468621 SYNJ1O43426 1573 aa9.37□□□□□ -0.91
SND1-207ENST00000468621 PBRM1Q86U86 1689 aa9.36□□□□□ -0.91
SND1-207ENST00000468621 AQRO60306 1485 aaKnown RBP eCLIP9.34□□□□□ -0.912e-8■■■■□ 21.6
SND1-207ENST00000468621 SOGA1O94964 1423 aa9.34□□□□□ -0.91
SND1-207ENST00000468621 OSCARQ8IYS5 282 aa9.33□□□□□ -0.92
SND1-207ENST00000468621 ABCA5Q8WWZ7 1642 aa9.32□□□□□ -0.92
SND1-207ENST00000468621 WRNQ14191 1432 aaPredicted RBP eCLIP9.31□□□□□ -0.92
SND1-207ENST00000468621 ABCA10Q8WWZ4 1543 aa9.31□□□□□ -0.92
SND1-207ENST00000468621 TDRD9Q8NDG6 1382 aaKnown RBP9.29□□□□□ -0.92
SND1-207ENST00000468621 GAPVD1Q14C86 1478 aa9.26□□□□□ -0.93
SND1-207ENST00000468621 SNAPC4Q5SXM2 1469 aa9.26□□□□□ -0.93
SND1-207ENST00000468621 RIMBP3CA6NJZ7 1639 aa9.25□□□□□ -0.93
SND1-207ENST00000468621 RIMBP3BA6NNM3 1639 aa9.25□□□□□ -0.93
SND1-207ENST00000468621 RIMBP3Q9UFD9 1639 aa9.25□□□□□ -0.93
SND1-207ENST00000468621 GRIN2BQ13224 1484 aa9.25□□□□□ -0.93
SND1-207ENST00000468621 MAGI1Q96QZ7 1491 aaPredicted RBP9.25□□□□□ -0.93
SND1-207ENST00000468621 ADAMTS12P58397 1594 aa9.22□□□□□ -0.93
SND1-207ENST00000468621 TRHP20396 242 aaPredicted RBP9.21□□□□□ -0.94
SND1-207ENST00000468621 SYNJ2O15056 1496 aa9.21□□□□□ -0.94
SND1-207ENST00000468621 ERICH3Q5RHP9 1530 aa9.2□□□□□ -0.94
SND1-207ENST00000468621 CLASP1Q7Z460 1538 aa9.2□□□□□ -0.94
SND1-207ENST00000468621 ARHGEF11O15085 1522 aa9.18□□□□□ -0.94
SND1-207ENST00000468621 FBLN2P98095 1184 aa9.18□□□□□ -0.94
SND1-207ENST00000468621 CYB5RLQ6IPT4 315 aa9.16□□□□□ -0.94
SND1-207ENST00000468621 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
SND1-207ENST00000468621 GRIN2AQ12879 1464 aa9.15□□□□□ -0.94
SND1-207ENST00000468621 CUL7Q14999 1698 aa9.14□□□□□ -0.95
SND1-207ENST00000468621 CHMP7Q8WUX9 453 aaPredicted RBP9.14□□□□□ -0.95
SND1-207ENST00000468621 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
SND1-207ENST00000468621 SHROOM2Q13796 1616 aa9.12□□□□□ -0.95
SND1-207ENST00000468621 NUP160Q12769 1436 aa9.11□□□□□ -0.95
SND1-207ENST00000468621 KIF27Q86VH2 1401 aa9.11□□□□□ -0.95
SND1-207ENST00000468621 ARAP1Q96P48 1450 aa9.1□□□□□ -0.95
SND1-207ENST00000468621 CHIC1Q5VXU3 224 aa9.1□□□□□ -0.95
SND1-207ENST00000468621 RUSC2Q8N2Y8 1516 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms