RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 CHGAP10645 457 aaKnown RBP27.85■■■□□ 2.05
YBX1-204ENST00000467957 CLTCL1P53675 1640 aa27.82■■■□□ 2.04
YBX1-204ENST00000467957 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.81■■■□□ 2.04
YBX1-204ENST00000467957 RAB3GAP2Q9H2M9 1393 aa27.79■■■□□ 2.04
YBX1-204ENST00000467957 PLEKHG1Q9ULL1 1385 aa27.79■■■□□ 2.04
YBX1-204ENST00000467957 MPHOSPH9Q99550 1183 aa27.79■■■□□ 2.04
YBX1-204ENST00000467957 STRCP1A6NGW2 1772 aa27.77■■■□□ 2.04
YBX1-204ENST00000467957 PPP1R15AO75807 674 aaPredicted RBP27.76■■■□□ 2.03
YBX1-204ENST00000467957 KIF1BO60333 1816 aa27.75■■■□□ 2.03
YBX1-204ENST00000467957 HRCP23327 699 aa27.73■■■□□ 2.03
YBX1-204ENST00000467957 SLC26A8Q96RN1 970 aa27.73■■■□□ 2.03
YBX1-204ENST00000467957 FOXD1Q16676 465 aa27.71■■■□□ 2.03
YBX1-204ENST00000467957 BCANQ96GW7 911 aa27.7■■■□□ 2.02
YBX1-204ENST00000467957 LRRC7Q96NW7 1537 aa27.69■■■□□ 2.02
YBX1-204ENST00000467957 ZNF326Q5BKZ1 582 aaKnown RBP27.68■■■□□ 2.02
YBX1-204ENST00000467957 KCNA6P17658 529 aa27.67■■■□□ 2.02
YBX1-204ENST00000467957 NUTM2DQ5VT03 806 aaPredicted RBP27.67■■■□□ 2.02
YBX1-204ENST00000467957 TBX22Q9Y458 520 aa27.67■■■□□ 2.02
YBX1-204ENST00000467957 NEXMIFQ5QGS0 1516 aa27.67■■■□□ 2.02
YBX1-204ENST00000467957 DIP2AQ14689 1571 aa27.66■■■□□ 2.02
YBX1-204ENST00000467957 ADAMTS13Q76LX8 1427 aa27.66■■■□□ 2.02
YBX1-204ENST00000467957 CCDC144AA2RUR9 1427 aa27.65■■■□□ 2.02
YBX1-204ENST00000467957 NWD1Q149M9 1564 aa27.65■■■□□ 2.02
YBX1-204ENST00000467957 RPGRIP1LQ68CZ1 1315 aa27.62■■■□□ 2.01
YBX1-204ENST00000467957 SETBP1Q9Y6X0 1596 aa27.61■■■□□ 2.01
YBX1-204ENST00000467957 UBAP1LF5GYI3 381 aa27.61■■■□□ 2.01
YBX1-204ENST00000467957 CHD2O14647 1828 aaKnown RBP27.61■■■□□ 2.01
YBX1-204ENST00000467957 NKTRP30414 1462 aaKnown RBP27.6■■■□□ 2.01
YBX1-204ENST00000467957 SENP3Q9H4L4 574 aaPredicted RBP27.6■■■□□ 2.01
YBX1-204ENST00000467957 PIK3R4Q99570 1358 aa27.6■■■□□ 2.01
YBX1-204ENST00000467957 NRXN3Q9Y4C0 1643 aa27.59■■■□□ 2.01
YBX1-204ENST00000467957 XIRP1Q702N8 1843 aaKnown RBP27.57■■■□□ 2
YBX1-204ENST00000467957 SPATA31E1Q6ZUB1 1445 aa27.57■■■□□ 2
YBX1-204ENST00000467957 TOM1O60784 492 aa27.56■■■□□ 2
YBX1-204ENST00000467957 VGFO15240 615 aaPredicted RBP27.55■■■□□ 2
YBX1-204ENST00000467957 PPLO60437 1756 aa27.55■■■□□ 2
YBX1-204ENST00000467957 PROSER2Q86WR7 435 aaPredicted RBP27.52■■■□□ 2
YBX1-204ENST00000467957 ALKQ9UM73 1620 aa27.52■■■□□ 2
YBX1-204ENST00000467957 TMEM94Q12767 1356 aa27.51■■□□□ 1.99
YBX1-204ENST00000467957 ANKRD30BQ9BXX2 1392 aa27.5■■□□□ 1.99
YBX1-204ENST00000467957 IFT172Q9UG01 1749 aa27.47■■□□□ 1.99
YBX1-204ENST00000467957 PTPRUQ92729 1446 aa27.47■■□□□ 1.99
YBX1-204ENST00000467957 RGL3Q3MIN7 710 aa27.46■■□□□ 1.99
YBX1-204ENST00000467957 NCOA3Q9Y6Q9 1424 aa27.45■■□□□ 1.98
YBX1-204ENST00000467957 METP08581 1390 aa27.45■■□□□ 1.98
YBX1-204ENST00000467957 AMOTL2Q9Y2J4 779 aa27.44■■□□□ 1.98
YBX1-204ENST00000467957 XRN1Q8IZH2 1706 aaKnown RBP27.44■■□□□ 1.98
YBX1-204ENST00000467957 SETD1AO15047 1707 aaKnown RBP27.43■■□□□ 1.98
YBX1-204ENST00000467957 PIP4K2BP78356 416 aa27.41■■□□□ 1.98
YBX1-204ENST00000467957 RBM33Q96EV2 1170 aaKnown RBP27.41■■□□□ 1.98
YBX1-204ENST00000467957 ADGRF5Q8IZF2 1346 aa27.39■■□□□ 1.97
YBX1-204ENST00000467957 MSH6P52701 1360 aa27.38■■□□□ 1.97
YBX1-204ENST00000467957 SCAF1Q9H7N4 1312 aaKnown RBP27.38■■□□□ 1.97
YBX1-204ENST00000467957 PIK3C2GO75747 1445 aa27.33■■□□□ 1.97
YBX1-204ENST00000467957 PRAG1Q86YV5 1406 aa27.33■■□□□ 1.97
YBX1-204ENST00000467957 MYOM2P54296 1465 aa27.33■■□□□ 1.97
YBX1-204ENST00000467957 TRIM26Q12899 539 aaPredicted RBP27.32■■□□□ 1.96
YBX1-204ENST00000467957 NRXN1Q9ULB1 1477 aa27.32■■□□□ 1.96
YBX1-204ENST00000467957 C19orf44Q9H6X5 657 aa27.3■■□□□ 1.96
YBX1-204ENST00000467957 FAM135BQ49AJ0 1406 aa27.3■■□□□ 1.96
YBX1-204ENST00000467957 PTCH1Q13635 1447 aa27.29■■□□□ 1.96
YBX1-204ENST00000467957 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.29■■□□□ 1.96
YBX1-204ENST00000467957 HSPA1LP34931 641 aa27.28■■□□□ 1.96
YBX1-204ENST00000467957 C14orf37Q86TY3 774 aa27.28■■□□□ 1.96
YBX1-204ENST00000467957 DCCP43146 1447 aa27.25■■□□□ 1.95
YBX1-204ENST00000467957 CADPS2Q86UW7 1296 aa27.25■■□□□ 1.95
YBX1-204ENST00000467957 STAC3Q96MF2 364 aa27.25■■□□□ 1.95
YBX1-204ENST00000467957 SLAIN2Q9P270 581 aa27.25■■□□□ 1.95
YBX1-204ENST00000467957 LAMC1P11047 1609 aa27.23■■□□□ 1.95
YBX1-204ENST00000467957 C14orf93Q9H972 538 aaKnown RBP27.23■■□□□ 1.95
YBX1-204ENST00000467957 ROBO2Q9HCK4 1378 aa27.22■■□□□ 1.95
YBX1-204ENST00000467957 ASXL1Q8IXJ9 1541 aa27.22■■□□□ 1.95
YBX1-204ENST00000467957 ATF3P18847 181 aa27.22■■□□□ 1.95
YBX1-204ENST00000467957 ADGRL3Q9HAR2 1447 aa27.22■■□□□ 1.95
YBX1-204ENST00000467957 ROBO1Q9Y6N7 1651 aa27.21■■□□□ 1.95
YBX1-204ENST00000467957 TECPR2O15040 1411 aa27.21■■□□□ 1.95
YBX1-204ENST00000467957 LRPPRCP42704 1394 aaKnown RBP27.2■■□□□ 1.94
YBX1-204ENST00000467957 DHX57Q6P158 1386 aaKnown RBP27.2■■□□□ 1.94
YBX1-204ENST00000467957 DCAF11Q8TEB1 546 aa27.19■■□□□ 1.94
YBX1-204ENST00000467957 NALCNQ8IZF0 1738 aa27.19■■□□□ 1.94
YBX1-204ENST00000467957 ABCC11Q96J66 1382 aa27.18■■□□□ 1.94
YBX1-204ENST00000467957 KNDC1Q76NI1 1749 aa27.18■■□□□ 1.94
YBX1-204ENST00000467957 CFAP70Q5T0N1 1121 aa27.17■■□□□ 1.94
YBX1-204ENST00000467957 TMEM132EQ6IEE7 984 aa27.17■■□□□ 1.94
YBX1-204ENST00000467957 YTHDC2Q9H6S0 1430 aaKnown RBP27.16■■□□□ 1.94
YBX1-204ENST00000467957 KDM2AQ9Y2K7 1162 aa27.15■■□□□ 1.94
YBX1-204ENST00000467957 STK26Q9P289 416 aa27.12■■□□□ 1.93
YBX1-204ENST00000467957 MST1RQ04912 1400 aa27.12■■□□□ 1.93
YBX1-204ENST00000467957 SIRT1Q96EB6 747 aa27.11■■□□□ 1.93
YBX1-204ENST00000467957 ADGRB1O14514 1584 aa27.09■■□□□ 1.93
YBX1-204ENST00000467957 WAPLQ7Z5K2 1190 aa27.06■■□□□ 1.92
YBX1-204ENST00000467957 BRINP3Q76B58 766 aa27.05■■□□□ 1.92
YBX1-204ENST00000467957 CDC42BPGQ6DT37 1551 aa27.05■■□□□ 1.92
YBX1-204ENST00000467957 DLC1Q96QB1 1528 aa27.04■■□□□ 1.92
YBX1-204ENST00000467957 AHDC1Q5TGY3 1603 aaPredicted RBP27.04■■□□□ 1.92
YBX1-204ENST00000467957 PHLPP1O60346 1717 aa27.04■■□□□ 1.92
YBX1-204ENST00000467957 SIN3AQ96ST3 1273 aa27.03■■□□□ 1.92
YBX1-204ENST00000467957 PLEKHH1Q9ULM0 1364 aa27.03■■□□□ 1.92
YBX1-204ENST00000467957 C1orf167Q5SNV9 1468 aa27.01■■□□□ 1.91
YBX1-204ENST00000467957 KIAA1210Q9ULL0 1709 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms