RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ZNF142P52746 1687 aaPredicted RBP9.87□□□□□ -0.83
SCAF4-204ENST00000467731 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
SCAF4-204ENST00000467731 NEXMIFQ5QGS0 1516 aa9.85□□□□□ -0.83
SCAF4-204ENST00000467731 PPP1R15AO75807 674 aaPredicted RBP9.84□□□□□ -0.83
SCAF4-204ENST00000467731 BCL11AQ9H165 835 aa9.84□□□□□ -0.83
SCAF4-204ENST00000467731 UHRF1BP1Q6BDS2 1440 aa9.84□□□□□ -0.83
SCAF4-204ENST00000467731 NUTM2DQ5VT03 806 aaPredicted RBP9.83□□□□□ -0.84
SCAF4-204ENST00000467731 RPGRIP1LQ68CZ1 1315 aa9.82□□□□□ -0.84
SCAF4-204ENST00000467731 MYOM2P54296 1465 aa9.82□□□□□ -0.84
SCAF4-204ENST00000467731 ZFYVE9O95405 1425 aa9.82□□□□□ -0.84
SCAF4-204ENST00000467731 RIMS2Q9UQ26 1411 aa9.82□□□□□ -0.84
SCAF4-204ENST00000467731 TMEM2Q9UHN6 1383 aa9.82□□□□□ -0.84
SCAF4-204ENST00000467731 NBPF8Q3BBV2 869 aa9.81□□□□□ -0.84
SCAF4-204ENST00000467731 THEMISQ8N1K5 641 aaPredicted RBP9.81□□□□□ -0.84
SCAF4-204ENST00000467731 PRAG1Q86YV5 1406 aa9.81□□□□□ -0.84
SCAF4-204ENST00000467731 SLIT1O75093 1534 aa9.81□□□□□ -0.84
SCAF4-204ENST00000467731 ADGRF5Q8IZF2 1346 aa9.81□□□□□ -0.84
SCAF4-204ENST00000467731 STAC3Q96MF2 364 aa9.8□□□□□ -0.84
SCAF4-204ENST00000467731 ARHGAP23Q9P227 1491 aa9.8□□□□□ -0.84
SCAF4-204ENST00000467731 NRXN1Q9ULB1 1477 aa9.8□□□□□ -0.84
SCAF4-204ENST00000467731 VGFO15240 615 aaPredicted RBP9.8□□□□□ -0.84
SCAF4-204ENST00000467731 TRPM1Q7Z4N2 1603 aa9.79□□□□□ -0.84
SCAF4-204ENST00000467731 PIK3C2GO75747 1445 aa9.79□□□□□ -0.84
SCAF4-204ENST00000467731 SENP3Q9H4L4 574 aaPredicted RBP9.79□□□□□ -0.84
SCAF4-204ENST00000467731 SCAF1Q9H7N4 1312 aaKnown RBP9.79□□□□□ -0.84
SCAF4-204ENST00000467731 LTKP29376 864 aa9.78□□□□□ -0.84
SCAF4-204ENST00000467731 LMTK3Q96Q04 1460 aa9.78□□□□□ -0.84
SCAF4-204ENST00000467731 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.78□□□□□ -0.84
SCAF4-204ENST00000467731 HDGFP51858 240 aaKnown RBP9.78□□□□□ -0.84
SCAF4-204ENST00000467731 TXNDC2Q86VQ3 553 aa9.77□□□□□ -0.85
SCAF4-204ENST00000467731 EID1Q9Y6B2 187 aa9.77□□□□□ -0.85
SCAF4-204ENST00000467731 POLR1AO95602 1720 aaPredicted RBP9.77□□□□□ -0.85
SCAF4-204ENST00000467731 KIAA1210Q9ULL0 1709 aa9.77□□□□□ -0.85
SCAF4-204ENST00000467731 RALGAPBQ86X10 1494 aa9.77□□□□□ -0.85
SCAF4-204ENST00000467731 SCAF11Q99590 1463 aaKnown RBP9.77□□□□□ -0.85
SCAF4-204ENST00000467731 NRXN3Q9Y4C0 1643 aa9.77□□□□□ -0.85
SCAF4-204ENST00000467731 IQGAP1P46940 1657 aa9.76□□□□□ -0.85
SCAF4-204ENST00000467731 HSPA2P54652 639 aa9.76□□□□□ -0.85
SCAF4-204ENST00000467731 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
SCAF4-204ENST00000467731 ROCK2O75116 1388 aaKnown RBP9.75□□□□□ -0.85
SCAF4-204ENST00000467731 LAMC1P11047 1609 aa9.75□□□□□ -0.85
SCAF4-204ENST00000467731 NBPF1Q3BBV0 1214 aa9.75□□□□□ -0.85
SCAF4-204ENST00000467731 ANKLE2Q86XL3 938 aa9.75□□□□□ -0.85
SCAF4-204ENST00000467731 SETBP1Q9Y6X0 1596 aa9.75□□□□□ -0.85
SCAF4-204ENST00000467731 SETD1AO15047 1707 aaKnown RBP9.75□□□□□ -0.85
SCAF4-204ENST00000467731 PLEKHG1Q9ULL1 1385 aa9.74□□□□□ -0.85
SCAF4-204ENST00000467731 ALKQ9UM73 1620 aa9.74□□□□□ -0.85
SCAF4-204ENST00000467731 BCANQ96GW7 911 aa9.74□□□□□ -0.85
SCAF4-204ENST00000467731 C14orf93Q9H972 538 aaKnown RBP9.74□□□□□ -0.85
SCAF4-204ENST00000467731 ADGRB1O14514 1584 aa9.72□□□□□ -0.85
SCAF4-204ENST00000467731 CARD11Q9BXL7 1154 aa9.72□□□□□ -0.85
SCAF4-204ENST00000467731 ASXL1Q8IXJ9 1541 aa9.72□□□□□ -0.85
SCAF4-204ENST00000467731 ADAMTS13Q76LX8 1427 aa9.72□□□□□ -0.85
SCAF4-204ENST00000467731 GPRASP1Q5JY77 1395 aa9.72□□□□□ -0.85
SCAF4-204ENST00000467731 NCKAP5LQ9HCH0 1330 aa9.72□□□□□ -0.85
SCAF4-204ENST00000467731 STRCQ7RTU9 1775 aa9.72□□□□□ -0.85
SCAF4-204ENST00000467731 TMEM132EQ6IEE7 984 aa9.72□□□□□ -0.85
SCAF4-204ENST00000467731 MED14O60244 1454 aa9.71□□□□□ -0.85
SCAF4-204ENST00000467731 SLC26A8Q96RN1 970 aa9.71□□□□□ -0.85
SCAF4-204ENST00000467731 NPHP4O75161 1426 aaPredicted RBP9.71□□□□□ -0.86
SCAF4-204ENST00000467731 DIP2AQ14689 1571 aa9.7□□□□□ -0.86
SCAF4-204ENST00000467731 METP08581 1390 aa9.7□□□□□ -0.86
SCAF4-204ENST00000467731 USP47Q96K76 1375 aa9.69□□□□□ -0.86
SCAF4-204ENST00000467731 HIRIP3Q9BW71 556 aaPredicted RBP9.68□□□□□ -0.86
SCAF4-204ENST00000467731 YTHDC2Q9H6S0 1430 aaKnown RBP9.68□□□□□ -0.86
SCAF4-204ENST00000467731 ARHGEF28Q8N1W1 1705 aaKnown RBP9.68□□□□□ -0.86
SCAF4-204ENST00000467731 EIF4G2P78344 907 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCAF4-204ENST00000467731 TBX22Q9Y458 520 aa9.68□□□□□ -0.86
SCAF4-204ENST00000467731 AEBP2Q6ZN18 517 aaPredicted RBP9.67□□□□□ -0.86
SCAF4-204ENST00000467731 TRAK1Q9UPV9 953 aa9.67□□□□□ -0.86
SCAF4-204ENST00000467731 HSPA5P11021 654 aaKnown RBP9.67□□□□□ -0.86
SCAF4-204ENST00000467731 STK26Q9P289 416 aa9.67□□□□□ -0.86
SCAF4-204ENST00000467731 CHD2O14647 1828 aaKnown RBP9.67□□□□□ -0.86
SCAF4-204ENST00000467731 KNDC1Q76NI1 1749 aa9.66□□□□□ -0.86
SCAF4-204ENST00000467731 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
SCAF4-204ENST00000467731 ST20-MTHFSA0A0A6YYL1 179 aa9.66□□□□□ -0.86
SCAF4-204ENST00000467731 LRPPRCP42704 1394 aaKnown RBP9.65□□□□□ -0.86
SCAF4-204ENST00000467731 EIF3AQ14152 1382 aaKnown RBP9.65□□□□□ -0.86
SCAF4-204ENST00000467731 XRN1Q8IZH2 1706 aaKnown RBP9.65□□□□□ -0.87
SCAF4-204ENST00000467731 DAXXQ9UER7 740 aaPredicted RBP9.64□□□□□ -0.87
SCAF4-204ENST00000467731 ABCC11Q96J66 1382 aa9.64□□□□□ -0.87
SCAF4-204ENST00000467731 PIK3R4Q99570 1358 aa9.64□□□□□ -0.87
SCAF4-204ENST00000467731 QRICH2Q9H0J4 1663 aa9.64□□□□□ -0.87
SCAF4-204ENST00000467731 TECPR2O15040 1411 aa9.64□□□□□ -0.87
SCAF4-204ENST00000467731 CPS1P31327 1500 aa9.64□□□□□ -0.87
SCAF4-204ENST00000467731 AMOTL2Q9Y2J4 779 aa9.63□□□□□ -0.87
SCAF4-204ENST00000467731 DLC1Q96QB1 1528 aa9.63□□□□□ -0.87
SCAF4-204ENST00000467731 STRCP1A6NGW2 1772 aa9.62□□□□□ -0.87
SCAF4-204ENST00000467731 SAFB2Q14151 953 aaKnown RBP eCLIP9.62□□□□□ -0.87
SCAF4-204ENST00000467731 PRAM1Q96QH2 718 aa9.62□□□□□ -0.87
SCAF4-204ENST00000467731 CENPJQ9HC77 1338 aaPredicted RBP9.62□□□□□ -0.87
SCAF4-204ENST00000467731 ROBO2Q9HCK4 1378 aa9.62□□□□□ -0.87
SCAF4-204ENST00000467731 KCNA6P17658 529 aa9.62□□□□□ -0.87
SCAF4-204ENST00000467731 NWD1Q149M9 1564 aa9.62□□□□□ -0.87
SCAF4-204ENST00000467731 PTCH1Q13635 1447 aa9.61□□□□□ -0.87
SCAF4-204ENST00000467731 PLEKHH1Q9ULM0 1364 aa9.61□□□□□ -0.87
SCAF4-204ENST00000467731 WAPLQ7Z5K2 1190 aa9.61□□□□□ -0.87
SCAF4-204ENST00000467731 TESK2Q96S53 571 aa9.61□□□□□ -0.87
SCAF4-204ENST00000467731 ZNF316A6NFI3 1004 aaPredicted RBP9.61□□□□□ -0.87
SCAF4-204ENST00000467731 DMRT2Q9Y5R5 561 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms