RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
SND1-205ENST00000467238 LMTK3Q96Q04 1460 aa11.44□□□□□ -0.58
SND1-205ENST00000467238 ABCA6Q8N139 1617 aa11.44□□□□□ -0.58
SND1-205ENST00000467238 DIP2CQ9Y2E4 1556 aa11.44□□□□□ -0.58
SND1-205ENST00000467238 ARHGEF12Q9NZN5 1544 aa11.44□□□□□ -0.58
SND1-205ENST00000467238 KIDINS220Q9ULH0 1771 aa11.43□□□□□ -0.58
SND1-205ENST00000467238 REREQ9P2R6 1566 aa11.42□□□□□ -0.58
SND1-205ENST00000467238 AFAP1Q8N556 730 aa11.42□□□□□ -0.58
SND1-205ENST00000467238 ZSWIM6Q9HCJ5 1215 aa11.42□□□□□ -0.58
SND1-205ENST00000467238 MLH3Q9UHC1 1453 aa11.42□□□□□ -0.58
SND1-205ENST00000467238 MLECQ14165 292 aa11.41□□□□□ -0.58
SND1-205ENST00000467238 TRAPPC8Q9Y2L5 1435 aa11.41□□□□□ -0.58
SND1-205ENST00000467238 SAMD9LQ8IVG5 1584 aa11.41□□□□□ -0.58
SND1-205ENST00000467238 PTGER2P43116 358 aa11.4□□□□□ -0.58
SND1-205ENST00000467238 IFNLR1Q8IU57 520 aaPredicted RBP11.4□□□□□ -0.58
SND1-205ENST00000467238 GPATCH8Q9UKJ3 1502 aaKnown RBP11.4□□□□□ -0.59
SND1-205ENST00000467238 PREX1Q8TCU6 1659 aa11.4□□□□□ -0.59
SND1-205ENST00000467238 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
SND1-205ENST00000467238 EFCAB3Q8N7B9 438 aa11.39□□□□□ -0.59
SND1-205ENST00000467238 ANKRD13DQ6ZTN6 518 aa11.38□□□□□ -0.59
SND1-205ENST00000467238 AGLP35573 1532 aa11.37□□□□□ -0.59
SND1-205ENST00000467238 SYCP2Q9BX26 1530 aa11.37□□□□□ -0.59
SND1-205ENST00000467238 C3P01024 1663 aa11.36□□□□□ -0.59
SND1-205ENST00000467238 CEP162Q5TB80 1403 aa11.35□□□□□ -0.59
SND1-205ENST00000467238 EHBP1L1Q8N3D4 1523 aa11.35□□□□□ -0.59
SND1-205ENST00000467238 TIAM1Q13009 1591 aa11.34□□□□□ -0.59
SND1-205ENST00000467238 MTUS2Q5JR59 1369 aa11.34□□□□□ -0.59
SND1-205ENST00000467238 ARSIQ5FYB1 569 aa11.34□□□□□ -0.59
SND1-205ENST00000467238 SUPT6HQ7KZ85 1726 aaKnown RBP11.34□□□□□ -0.59
SND1-205ENST00000467238 KIAA1107Q9UPP5 1409 aa11.34□□□□□ -0.59
SND1-205ENST00000467238 INO80Q9ULG1 1556 aaPredicted RBP11.33□□□□□ -0.6
SND1-205ENST00000467238 PLEKHH2Q8IVE3 1493 aa11.33□□□□□ -0.6
SND1-205ENST00000467238 HSPA2P54652 639 aa11.33□□□□□ -0.6
SND1-205ENST00000467238 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
SND1-205ENST00000467238 KHSRPQ92945 711 aaKnown RBP eCLIP11.33□□□□□ -0.6
SND1-205ENST00000467238 ZNF777Q9ULD5 760 aaPredicted RBP11.33□□□□□ -0.6
SND1-205ENST00000467238 CCNB3Q8WWL7 1395 aa11.32□□□□□ -0.6
SND1-205ENST00000467238 ATP7AQ04656 1500 aa11.32□□□□□ -0.6
SND1-205ENST00000467238 CEBPAP49715 358 aaPredicted RBP11.32□□□□□ -0.6
SND1-205ENST00000467238 STRCQ7RTU9 1775 aa11.31□□□□□ -0.6
SND1-205ENST00000467238 MROH2AA6NES4 1674 aa11.31□□□□□ -0.6
SND1-205ENST00000467238 LSM11P83369 360 aaKnown RBP eCLIP11.31□□□□□ -0.6
SND1-205ENST00000467238 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
SND1-205ENST00000467238 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
SND1-205ENST00000467238 PLXNC1O60486 1568 aa11.31□□□□□ -0.6
SND1-205ENST00000467238 ADGBQ8N7X0 1667 aa11.3□□□□□ -0.6
SND1-205ENST00000467238 HNRNPMP52272 730 aaKnown RBP eCLIP11.3□□□□□ -0.62e-7■□□□□ 8.6
SND1-205ENST00000467238 ZNF316A6NFI3 1004 aaPredicted RBP11.29□□□□□ -0.6
SND1-205ENST00000467238 MS4A4AQ96JQ5 239 aa11.29□□□□□ -0.6
SND1-205ENST00000467238 SPAG9O60271 1321 aaKnown RBP11.29□□□□□ -0.6
SND1-205ENST00000467238 UHRF1BP1Q6BDS2 1440 aa11.28□□□□□ -0.6
SND1-205ENST00000467238 CNTLNQ9NXG0 1405 aa11.28□□□□□ -0.6
SND1-205ENST00000467238 CLTCQ00610 1675 aaKnown RBP11.27□□□□□ -0.6
SND1-205ENST00000467238 MBD5Q9P267 1494 aa11.27□□□□□ -0.6
SND1-205ENST00000467238 FBXO41Q8TF61 875 aa11.27□□□□□ -0.61
SND1-205ENST00000467238 A2MP01023 1474 aa11.26□□□□□ -0.61
SND1-205ENST00000467238 NCOA2Q15596 1464 aa11.26□□□□□ -0.61
SND1-205ENST00000467238 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
SND1-205ENST00000467238 ZNF644Q9H582 1327 aaPredicted RBP11.26□□□□□ -0.61
SND1-205ENST00000467238 ESF1Q9H501 851 aaKnown RBP11.25□□□□□ -0.61
SND1-205ENST00000467238 VPS8Q8N3P4 1428 aa11.25□□□□□ -0.61
SND1-205ENST00000467238 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
SND1-205ENST00000467238 POTEEQ6S8J3 1075 aa11.24□□□□□ -0.61
SND1-205ENST00000467238 LOC105371045A0A1W2PR82 267 aa11.23□□□□□ -0.61
SND1-205ENST00000467238 RTEL1-TNFRSF6BF6WH68 1400 aa11.23□□□□□ -0.61
SND1-205ENST00000467238 NPATQ14207 1427 aa11.23□□□□□ -0.61
SND1-205ENST00000467238 CAMSAP2Q08AD1 1489 aa11.23□□□□□ -0.61
SND1-205ENST00000467238 ZNF142P52746 1687 aaPredicted RBP11.22□□□□□ -0.61
SND1-205ENST00000467238 ZMYM3Q14202 1370 aa11.22□□□□□ -0.61
SND1-205ENST00000467238 CCDC141Q6ZP82 1450 aa11.22□□□□□ -0.61
SND1-205ENST00000467238 ARHGEF5Q12774 1597 aa11.21□□□□□ -0.61
SND1-205ENST00000467238 LRRC9Q6ZRR7 1453 aa11.21□□□□□ -0.61
SND1-205ENST00000467238 MYO3AQ8NEV4 1616 aa11.2□□□□□ -0.62
SND1-205ENST00000467238 MAP3K1Q13233 1512 aa11.2□□□□□ -0.62
SND1-205ENST00000467238 CFAP65Q6ZU64 1925 aaKnown RBP11.19□□□□□ -0.62
SND1-205ENST00000467238 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
SND1-205ENST00000467238 NCOA1Q15788 1441 aa11.18□□□□□ -0.62
SND1-205ENST00000467238 DHX29Q7Z478 1369 aaKnown RBP11.18□□□□□ -0.62
SND1-205ENST00000467238 CAMSAP1Q5T5Y3 1602 aa11.18□□□□□ -0.62
SND1-205ENST00000467238 GGT6Q6P531 493 aa11.18□□□□□ -0.62
SND1-205ENST00000467238 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
SND1-205ENST00000467238 PHF8Q9UPP1 1060 aa11.18□□□□□ -0.62
SND1-205ENST00000467238 AXIN2Q9Y2T1 843 aa11.18□□□□□ -0.62
SND1-205ENST00000467238 PTPRTO14522 1441 aa11.18□□□□□ -0.62
SND1-205ENST00000467238 CEP170BQ9Y4F5 1589 aaPredicted RBP11.17□□□□□ -0.62
SND1-205ENST00000467238 RSPH4AQ5TD94 716 aa11.17□□□□□ -0.62
SND1-205ENST00000467238 MAST1Q9Y2H9 1570 aa11.16□□□□□ -0.62
SND1-205ENST00000467238 FAM135AQ9P2D6 1515 aa11.16□□□□□ -0.62
SND1-205ENST00000467238 SOX12O15370 315 aa11.16□□□□□ -0.62
SND1-205ENST00000467238 RTN4Q9NQC3 1192 aaKnown RBP11.16□□□□□ -0.62
SND1-205ENST00000467238 KANK4Q5T7N3 995 aaPredicted RBP11.15□□□□□ -0.62
SND1-205ENST00000467238 KDM5DQ9BY66 1539 aa11.14□□□□□ -0.63
SND1-205ENST00000467238 RNF17Q9BXT8 1623 aaKnown RBP11.14□□□□□ -0.63
SND1-205ENST00000467238 PBX2P40425 430 aa11.14□□□□□ -0.63
SND1-205ENST00000467238 HCSTQ9UBK5 93 aa11.14□□□□□ -0.63
SND1-205ENST00000467238 MYOM3Q5VTT5 1437 aa11.14□□□□□ -0.63
SND1-205ENST00000467238 LTBP4Q8N2S1 1624 aa11.13□□□□□ -0.63
SND1-205ENST00000467238 PLA2R1Q13018 1463 aa11.13□□□□□ -0.63
SND1-205ENST00000467238 MIA2Q96PC5 1412 aa11.13□□□□□ -0.63
SND1-205ENST00000467238 KIF3BO15066 747 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms