RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 CADPS2Q86UW7 1296 aa14.71□□□□□ -0.05
ABCF3-205ENST00000466416 SLC52A1Q9NWF4 448 aa14.71□□□□□ -0.05
ABCF3-205ENST00000466416 C19orf44Q9H6X5 657 aa14.7□□□□□ -0.06
ABCF3-205ENST00000466416 ATF3P18847 181 aa14.69□□□□□ -0.06
ABCF3-205ENST00000466416 C14orf37Q86TY3 774 aa14.69□□□□□ -0.06
ABCF3-205ENST00000466416 AFF2P51816 1311 aa14.68□□□□□ -0.06
ABCF3-205ENST00000466416 ERBINQ96RT1 1412 aa14.68□□□□□ -0.06
ABCF3-205ENST00000466416 NUTM2BA6NNL0 878 aaPredicted RBP14.68□□□□□ -0.06
ABCF3-205ENST00000466416 NUTM2EB1AL46 878 aaPredicted RBP14.68□□□□□ -0.06
ABCF3-205ENST00000466416 RBM6P78332 1123 aaKnown RBP14.68□□□□□ -0.06
ABCF3-205ENST00000466416 NUTM2AQ8IVF1 878 aaPredicted RBP14.68□□□□□ -0.06
ABCF3-205ENST00000466416 TBX22Q9Y458 520 aa14.68□□□□□ -0.06
ABCF3-205ENST00000466416 KIF15Q9NS87 1388 aa14.68□□□□□ -0.06
ABCF3-205ENST00000466416 MYOM3Q5VTT5 1437 aa14.67□□□□□ -0.06
ABCF3-205ENST00000466416 AHDC1Q5TGY3 1603 aaPredicted RBP14.67□□□□□ -0.06
ABCF3-205ENST00000466416 SRCAPQ6ZRS2 3230 aa14.67□□□□□ -0.06
ABCF3-205ENST00000466416 QTRT2Q9H974 415 aaKnown RBP14.67□□□□□ -0.06
ABCF3-205ENST00000466416 RRP7BPQ9NSQ0 103 aa14.67□□□□□ -0.06
ABCF3-205ENST00000466416 SHPRHQ149N8 1683 aa14.66□□□□□ -0.06
ABCF3-205ENST00000466416 PLEKHG1Q9ULL1 1385 aa14.66□□□□□ -0.06
ABCF3-205ENST00000466416 PPP1R15AO75807 674 aaPredicted RBP14.65□□□□□ -0.06
ABCF3-205ENST00000466416 ZRANB1Q9UGI0 708 aa14.65□□□□□ -0.06
ABCF3-205ENST00000466416 NUTM2DQ5VT03 806 aaPredicted RBP14.64□□□□□ -0.07
ABCF3-205ENST00000466416 NOS1P29475 1434 aa14.64□□□□□ -0.07
ABCF3-205ENST00000466416 CHD2O14647 1828 aaKnown RBP14.64□□□□□ -0.07
ABCF3-205ENST00000466416 ADGRB3O60242 1522 aa14.63□□□□□ -0.07
ABCF3-205ENST00000466416 LMTK2Q8IWU2 1503 aa14.63□□□□□ -0.07
ABCF3-205ENST00000466416 BRINP3Q76B58 766 aa14.63□□□□□ -0.07
ABCF3-205ENST00000466416 RGS12O14924 1447 aa14.62□□□□□ -0.07
ABCF3-205ENST00000466416 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.62□□□□□ -0.07
ABCF3-205ENST00000466416 LRRC59Q96AG4 307 aaKnown RBP14.62□□□□□ -0.07
ABCF3-205ENST00000466416 NGLY1Q96IV0 654 aa14.62□□□□□ -0.07
ABCF3-205ENST00000466416 ZFYVE9O95405 1425 aa14.61□□□□□ -0.07
ABCF3-205ENST00000466416 ATAD2Q6PL18 1390 aa14.6□□□□□ -0.07
ABCF3-205ENST00000466416 PIK3R4Q99570 1358 aa14.6□□□□□ -0.07
ABCF3-205ENST00000466416 SETD5Q9C0A6 1442 aa14.6□□□□□ -0.07
ABCF3-205ENST00000466416 C8orf37Q96NL8 207 aa14.6□□□□□ -0.07
ABCF3-205ENST00000466416 RIMS2Q9UQ26 1411 aa14.59□□□□□ -0.07
ABCF3-205ENST00000466416 DIP2AQ14689 1571 aa14.59□□□□□ -0.07
ABCF3-205ENST00000466416 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.58□□□□□ -0.08
ABCF3-205ENST00000466416 ABCC5O15440 1437 aa14.58□□□□□ -0.08
ABCF3-205ENST00000466416 CCDC125Q86Z20 511 aa14.56□□□□□ -0.08
ABCF3-205ENST00000466416 AMOTL2Q9Y2J4 779 aa14.55□□□□□ -0.08
ABCF3-205ENST00000466416 DCCP43146 1447 aa14.55□□□□□ -0.08
ABCF3-205ENST00000466416 KANK4Q5T7N3 995 aaPredicted RBP14.54□□□□□ -0.08
ABCF3-205ENST00000466416 ANKRD30AQ9BXX3 1397 aa14.54□□□□□ -0.08
ABCF3-205ENST00000466416 ADAMTS13Q76LX8 1427 aa14.54□□□□□ -0.08
ABCF3-205ENST00000466416 RPRD2Q5VT52 1461 aaKnown RBP14.54□□□□□ -0.08
ABCF3-205ENST00000466416 ASXL1Q8IXJ9 1541 aa14.52□□□□□ -0.08
ABCF3-205ENST00000466416 PNPLA6Q8IY17 1366 aa14.52□□□□□ -0.08
ABCF3-205ENST00000466416 TRPC5Q9UL62 973 aaPredicted RBP14.52□□□□□ -0.09
ABCF3-205ENST00000466416 CHGAP10645 457 aaKnown RBP14.51□□□□□ -0.09
ABCF3-205ENST00000466416 USP21Q9UK80 565 aa14.51□□□□□ -0.09
ABCF3-205ENST00000466416 DAPK1P53355 1430 aa14.5□□□□□ -0.09
ABCF3-205ENST00000466416 ADAMTS2O95450 1211 aa14.5□□□□□ -0.09
ABCF3-205ENST00000466416 CHIC2Q9UKJ5 165 aa14.5□□□□□ -0.09
ABCF3-205ENST00000466416 MST1RQ04912 1400 aa14.49□□□□□ -0.09
ABCF3-205ENST00000466416 SETBP1Q9Y6X0 1596 aa14.49□□□□□ -0.09
ABCF3-205ENST00000466416 TMEM131LA2VDJ0 1609 aa14.48□□□□□ -0.09
ABCF3-205ENST00000466416 FNBP4Q8N3X1 1017 aaPredicted RBP14.48□□□□□ -0.09
ABCF3-205ENST00000466416 CROCC2H7BZ55 1655 aa14.48□□□□□ -0.09
ABCF3-205ENST00000466416 PTPRUQ92729 1446 aa14.48□□□□□ -0.09
ABCF3-205ENST00000466416 TRPM2O94759 1503 aa14.47□□□□□ -0.09
ABCF3-205ENST00000466416 DDX17Q92841 729 aaKnown RBP14.47□□□□□ -0.09
ABCF3-205ENST00000466416 VPS8Q8N3P4 1428 aa14.47□□□□□ -0.09
ABCF3-205ENST00000466416 NHSL1Q5SYE7 1610 aa14.46□□□□□ -0.09
ABCF3-205ENST00000466416 MYO5BQ9ULV0 1848 aa14.45□□□□□ -0.1
ABCF3-205ENST00000466416 GCC2Q8IWJ2 1684 aa14.45□□□□□ -0.1
ABCF3-205ENST00000466416 PTPN23Q9H3S7 1636 aa14.44□□□□□ -0.1
ABCF3-205ENST00000466416 ATRNO75882 1429 aa14.43□□□□□ -0.1
ABCF3-205ENST00000466416 PTCH1Q13635 1447 aa14.43□□□□□ -0.1
ABCF3-205ENST00000466416 SOS2Q07890 1332 aaPredicted RBP14.41□□□□□ -0.1
ABCF3-205ENST00000466416 ADGRL3Q9HAR2 1447 aa14.41□□□□□ -0.1
ABCF3-205ENST00000466416 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
ABCF3-205ENST00000466416 ADGRL2O95490 1459 aa14.39□□□□□ -0.11
ABCF3-205ENST00000466416 GJD4Q96KN9 370 aaPredicted RBP14.39□□□□□ -0.11
ABCF3-205ENST00000466416 BLMP54132 1417 aaPredicted RBP14.38□□□□□ -0.11
ABCF3-205ENST00000466416 C1orf167Q5SNV9 1468 aa14.38□□□□□ -0.11
ABCF3-205ENST00000466416 APLP2Q06481 763 aa14.37□□□□□ -0.11
ABCF3-205ENST00000466416 UNC13BO14795 1591 aa14.37□□□□□ -0.11
ABCF3-205ENST00000466416 XRN1Q8IZH2 1706 aaKnown RBP14.37□□□□□ -0.11
ABCF3-205ENST00000466416 METP08581 1390 aa14.36□□□□□ -0.11
ABCF3-205ENST00000466416 SF3B2Q13435 895 aaKnown RBP14.36□□□□□ -0.11
ABCF3-205ENST00000466416 EP400Q96L91 3159 aa14.35□□□□□ -0.11
ABCF3-205ENST00000466416 ORAI2Q96SN7 254 aa14.35□□□□□ -0.11
ABCF3-205ENST00000466416 BCL9LQ86UU0 1499 aa14.35□□□□□ -0.11
ABCF3-205ENST00000466416 LAMC1P11047 1609 aa14.34□□□□□ -0.11
ABCF3-205ENST00000466416 DEFB132Q7Z7B7 95 aa14.33□□□□□ -0.12
ABCF3-205ENST00000466416 ZNF326Q5BKZ1 582 aaKnown RBP14.32□□□□□ -0.12
ABCF3-205ENST00000466416 LRP5O75197 1615 aa14.31□□□□□ -0.12
ABCF3-205ENST00000466416 UNC5CLQ8IV45 518 aa14.31□□□□□ -0.12
ABCF3-205ENST00000466416 MYOM2P54296 1465 aa14.31□□□□□ -0.12
ABCF3-205ENST00000466416 NRXN3Q9Y4C0 1643 aa14.3□□□□□ -0.12
ABCF3-205ENST00000466416 NPHP3Q7Z494 1330 aa14.3□□□□□ -0.12
ABCF3-205ENST00000466416 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
ABCF3-205ENST00000466416 COL22A1Q8NFW1 1626 aaPredicted RBP14.29□□□□□ -0.12
ABCF3-205ENST00000466416 E9PCH4 1651 aa14.29□□□□□ -0.12
ABCF3-205ENST00000466416 HRCP23327 699 aa14.28□□□□□ -0.12
ABCF3-205ENST00000466416 NALCNQ8IZF0 1738 aa14.27□□□□□ -0.12
ABCF3-205ENST00000466416 RALGAPBQ86X10 1494 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms