RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 FANCAO15360 1455 aa25.66■■□□□ 1.7
LIMS2-212ENST00000466410 CDCA8Q53HL2 280 aa25.66■■□□□ 1.7
LIMS2-212ENST00000466410 KANK1Q14678 1352 aa25.65■■□□□ 1.7
LIMS2-212ENST00000466410 INO80Q9ULG1 1556 aaPredicted RBP25.65■■□□□ 1.7
LIMS2-212ENST00000466410 SYNMO15061 1565 aa25.65■■□□□ 1.7
LIMS2-212ENST00000466410 MYT1LQ9UL68 1186 aa25.64■■□□□ 1.69
LIMS2-212ENST00000466410 VWDEQ8N2E2 1590 aa25.64■■□□□ 1.69
LIMS2-212ENST00000466410 ANP32AP39687 249 aaKnown RBP25.63■■□□□ 1.69
LIMS2-212ENST00000466410 WDR43Q15061 677 aaKnown RBP eCLIP25.6■■□□□ 1.69
LIMS2-212ENST00000466410 ASXL1Q8IXJ9 1541 aa25.6■■□□□ 1.69
LIMS2-212ENST00000466410 MYOM1P52179 1685 aa25.6■■□□□ 1.69
LIMS2-212ENST00000466410 IPO9Q96P70 1041 aaKnown RBP25.59■■□□□ 1.69
LIMS2-212ENST00000466410 PLEKHH1Q9ULM0 1364 aa25.59■■□□□ 1.69
LIMS2-212ENST00000466410 TCERG1O14776 1098 aaKnown RBP25.59■■□□□ 1.69
LIMS2-212ENST00000466410 ADGRL1O94910 1474 aa25.58■■□□□ 1.69
LIMS2-212ENST00000466410 UGGT1Q9NYU2 1555 aa25.58■■□□□ 1.69
LIMS2-212ENST00000466410 CRBNQ96SW2 442 aa25.58■■□□□ 1.69
LIMS2-212ENST00000466410 EIF3AQ14152 1382 aaKnown RBP25.58■■□□□ 1.69
LIMS2-212ENST00000466410 CFAP70Q5T0N1 1121 aa25.57■■□□□ 1.68
LIMS2-212ENST00000466410 MROH1Q8NDA8 1641 aa25.56■■□□□ 1.68
LIMS2-212ENST00000466410 KIAA1210Q9ULL0 1709 aa25.56■■□□□ 1.68
LIMS2-212ENST00000466410 ADGRF5Q8IZF2 1346 aa25.54■■□□□ 1.68
LIMS2-212ENST00000466410 PIK3C2GO75747 1445 aa25.53■■□□□ 1.68
LIMS2-212ENST00000466410 C20orf194Q5TEA3 1177 aa25.53■■□□□ 1.68
LIMS2-212ENST00000466410 DUSP27Q5VZP5 1158 aa25.53■■□□□ 1.68
LIMS2-212ENST00000466410 ZNF521Q96K83 1311 aa25.52■■□□□ 1.68
LIMS2-212ENST00000466410 NPC1L1Q9UHC9 1359 aa25.52■■□□□ 1.68
LIMS2-212ENST00000466410 NEURL4Q96JN8 1562 aa25.52■■□□□ 1.68
LIMS2-212ENST00000466410 MAP3K4Q9Y6R4 1608 aa25.52■■□□□ 1.68
LIMS2-212ENST00000466410 KDM5AP29375 1690 aaKnown RBP25.52■■□□□ 1.68
LIMS2-212ENST00000466410 NPM1P06748 294 aaKnown RBP eCLIP25.52■■□□□ 1.68
LIMS2-212ENST00000466410 ABCA6Q8N139 1617 aa25.51■■□□□ 1.67
LIMS2-212ENST00000466410 PDE4AP27815 886 aa25.51■■□□□ 1.67
LIMS2-212ENST00000466410 MYOM2P54296 1465 aa25.5■■□□□ 1.67
LIMS2-212ENST00000466410 ERVK-7P63135 1459 aa25.49■■□□□ 1.67
LIMS2-212ENST00000466410 ZBTB47Q9UFB7 747 aaPredicted RBP25.49■■□□□ 1.67
LIMS2-212ENST00000466410 GOLGA2Q08379 1002 aa25.48■■□□□ 1.67
LIMS2-212ENST00000466410 KIF1BO60333 1816 aa25.48■■□□□ 1.67
LIMS2-212ENST00000466410 MS4A1P11836 297 aa25.48■■□□□ 1.67
LIMS2-212ENST00000466410 EFCAB6Q5THR3 1501 aa25.47■■□□□ 1.67
LIMS2-212ENST00000466410 BACH2Q9BYV9 841 aa25.47■■□□□ 1.67
LIMS2-212ENST00000466410 NBR1Q14596 966 aa25.47■■□□□ 1.67
LIMS2-212ENST00000466410 SKAP1Q86WV1 359 aa25.47■■□□□ 1.67
LIMS2-212ENST00000466410 CCDC146Q8IYE0 955 aa25.47■■□□□ 1.67
LIMS2-212ENST00000466410 NPM2Q86SE8 214 aaKnown RBP25.46■■□□□ 1.67
LIMS2-212ENST00000466410 KIDINS220Q9ULH0 1771 aa25.46■■□□□ 1.67
LIMS2-212ENST00000466410 CARD14Q9BXL6 1004 aa25.45■■□□□ 1.66
LIMS2-212ENST00000466410 BCL11AQ9H165 835 aa25.45■■□□□ 1.66
LIMS2-212ENST00000466410 MROH2AA6NES4 1674 aa25.44■■□□□ 1.66
LIMS2-212ENST00000466410 PPRC1Q5VV67 1664 aaKnown RBP25.44■■□□□ 1.66
LIMS2-212ENST00000466410 IFT172Q9UG01 1749 aa25.44■■□□□ 1.66
LIMS2-212ENST00000466410 SLFN5Q08AF3 891 aa25.43■■□□□ 1.66
LIMS2-212ENST00000466410 SLC24A1O60721 1099 aa25.42■■□□□ 1.66
LIMS2-212ENST00000466410 CD109Q6YHK3 1445 aa25.41■■□□□ 1.66
LIMS2-212ENST00000466410 APAF1O14727 1248 aa25.4■■□□□ 1.66
LIMS2-212ENST00000466410 NRXN1Q9ULB1 1477 aa25.39■■□□□ 1.65
LIMS2-212ENST00000466410 SPINK5Q9NQ38 1064 aaPredicted RBP25.38■■□□□ 1.65
LIMS2-212ENST00000466410 NOS1P29475 1434 aa25.38■■□□□ 1.65
LIMS2-212ENST00000466410 TRMT2AQ8IZ69 625 aaKnown RBP25.38■■□□□ 1.65
LIMS2-212ENST00000466410 KDM2BQ8NHM5 1336 aa25.37■■□□□ 1.65
LIMS2-212ENST00000466410 CHGAP10645 457 aaKnown RBP25.37■■□□□ 1.65
LIMS2-212ENST00000466410 LMTK2Q8IWU2 1503 aa25.37■■□□□ 1.65
LIMS2-212ENST00000466410 ZNF518AQ6AHZ1 1483 aa25.36■■□□□ 1.65
LIMS2-212ENST00000466410 CFAP65Q6ZU64 1925 aaKnown RBP25.35■■□□□ 1.65
LIMS2-212ENST00000466410 MYO3AQ8NEV4 1616 aa25.35■■□□□ 1.65
LIMS2-212ENST00000466410 DEKP35659 375 aaKnown RBP25.34■■□□□ 1.65
LIMS2-212ENST00000466410 SBNO2Q9Y2G9 1366 aa25.34■■□□□ 1.65
LIMS2-212ENST00000466410 ADGRB3O60242 1522 aa25.34■■□□□ 1.65
LIMS2-212ENST00000466410 CENPJQ9HC77 1338 aaPredicted RBP25.33■■□□□ 1.65
LIMS2-212ENST00000466410 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.33■■□□□ 1.65
LIMS2-212ENST00000466410 TRAK1Q9UPV9 953 aa25.32■■□□□ 1.64
LIMS2-212ENST00000466410 NPATQ14207 1427 aa25.31■■□□□ 1.64
LIMS2-212ENST00000466410 POGZQ7Z3K3 1410 aa25.31■■□□□ 1.64
LIMS2-212ENST00000466410 CENPQQ7L2Z9 268 aaPredicted RBP25.3■■□□□ 1.64
LIMS2-212ENST00000466410 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
LIMS2-212ENST00000466410 CFAP74Q9C0B2 1584 aa25.3■■□□□ 1.64
LIMS2-212ENST00000466410 GGT6Q6P531 493 aa25.3■■□□□ 1.64
LIMS2-212ENST00000466410 NKTRP30414 1462 aaKnown RBP25.3■■□□□ 1.64
LIMS2-212ENST00000466410 SETBP1Q9Y6X0 1596 aa25.29■■□□□ 1.64
LIMS2-212ENST00000466410 C14orf93Q9H972 538 aaKnown RBP25.27■■□□□ 1.64
LIMS2-212ENST00000466410 E9PSI1 815 aa25.27■■□□□ 1.64
LIMS2-212ENST00000466410 BCAR3O75815 825 aa25.27■■□□□ 1.64
LIMS2-212ENST00000466410 FRMPD1Q5SYB0 1578 aa25.26■■□□□ 1.63
LIMS2-212ENST00000466410 TMEM132EQ6IEE7 984 aa25.26■■□□□ 1.63
LIMS2-212ENST00000466410 SLC12A5Q9H2X9 1139 aa25.26■■□□□ 1.63
LIMS2-212ENST00000466410 PPLO60437 1756 aa25.26■■□□□ 1.63
LIMS2-212ENST00000466410 POLR3AO14802 1390 aaPredicted RBP25.25■■□□□ 1.63
LIMS2-212ENST00000466410 CYB5RLQ6IPT4 315 aa25.25■■□□□ 1.63
LIMS2-212ENST00000466410 NSD3Q9BZ95 1437 aa25.25■■□□□ 1.63
LIMS2-212ENST00000466410 HECW2Q9P2P5 1572 aa25.23■■□□□ 1.63
LIMS2-212ENST00000466410 ADGRB1O14514 1584 aa25.23■■□□□ 1.63
LIMS2-212ENST00000466410 TNNT2P45379 298 aaPredicted RBP25.23■■□□□ 1.63
LIMS2-212ENST00000466410 RAPGEF3O95398 923 aa25.22■■□□□ 1.63
LIMS2-212ENST00000466410 MORC1Q86VD1 984 aa25.22■■□□□ 1.63
LIMS2-212ENST00000466410 QRICH2Q9H0J4 1663 aa25.22■■□□□ 1.63
LIMS2-212ENST00000466410 MLH3Q9UHC1 1453 aa25.22■■□□□ 1.63
LIMS2-212ENST00000466410 ZC3H13Q5T200 1668 aaKnown RBP25.21■■□□□ 1.63
LIMS2-212ENST00000466410 NGEFQ8N5V2 710 aa25.21■■□□□ 1.63
LIMS2-212ENST00000466410 RTL5Q5HYW3 569 aaPredicted RBP25.2■■□□□ 1.63
LIMS2-212ENST00000466410 WWC1Q8IX03 1113 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms