RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 NUTM2DQ5VT03 806 aaPredicted RBP17.67■□□□□ 0.42
EDEM3-204ENST00000466392 RIMS2Q9UQ26 1411 aa17.66■□□□□ 0.42
EDEM3-204ENST00000466392 KIF1BO60333 1816 aa17.66■□□□□ 0.42
EDEM3-204ENST00000466392 RAB3GAP2Q9H2M9 1393 aa17.66■□□□□ 0.42
EDEM3-204ENST00000466392 SLC26A8Q96RN1 970 aa17.62■□□□□ 0.41
EDEM3-204ENST00000466392 CPS1P31327 1500 aa17.62■□□□□ 0.41
EDEM3-204ENST00000466392 MPHOSPH9Q99550 1183 aa17.61■□□□□ 0.41
EDEM3-204ENST00000466392 PPP1R15AO75807 674 aaPredicted RBP17.6■□□□□ 0.41
EDEM3-204ENST00000466392 BCANQ96GW7 911 aa17.6■□□□□ 0.41
EDEM3-204ENST00000466392 XIRP1Q702N8 1843 aaKnown RBP17.59■□□□□ 0.41
EDEM3-204ENST00000466392 IQSEC2Q5JU85 1478 aa17.59■□□□□ 0.41
EDEM3-204ENST00000466392 PLEKHG1Q9ULL1 1385 aa17.58■□□□□ 0.4
EDEM3-204ENST00000466392 ZNF326Q5BKZ1 582 aaKnown RBP17.58■□□□□ 0.4
EDEM3-204ENST00000466392 NEXMIFQ5QGS0 1516 aa17.57■□□□□ 0.4
EDEM3-204ENST00000466392 NRXN3Q9Y4C0 1643 aa17.57■□□□□ 0.4
EDEM3-204ENST00000466392 LRRC7Q96NW7 1537 aa17.57■□□□□ 0.4
EDEM3-204ENST00000466392 CHD2O14647 1828 aaKnown RBP17.55■□□□□ 0.4
EDEM3-204ENST00000466392 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.54■□□□□ 0.4
EDEM3-204ENST00000466392 ADAMTS13Q76LX8 1427 aa17.54■□□□□ 0.4
EDEM3-204ENST00000466392 NWD1Q149M9 1564 aa17.53■□□□□ 0.4
EDEM3-204ENST00000466392 PPLO60437 1756 aa17.53■□□□□ 0.4
EDEM3-204ENST00000466392 HDGFP51858 240 aaKnown RBP17.53■□□□□ 0.4
EDEM3-204ENST00000466392 CCDC144AA2RUR9 1427 aa17.52■□□□□ 0.4
EDEM3-204ENST00000466392 ALKQ9UM73 1620 aa17.51■□□□□ 0.39
EDEM3-204ENST00000466392 UBAP1LF5GYI3 381 aa17.51■□□□□ 0.39
EDEM3-204ENST00000466392 RBM33Q96EV2 1170 aaKnown RBP17.51■□□□□ 0.39
EDEM3-204ENST00000466392 DIP2AQ14689 1571 aa17.5■□□□□ 0.39
EDEM3-204ENST00000466392 IFT172Q9UG01 1749 aa17.5■□□□□ 0.39
EDEM3-204ENST00000466392 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
EDEM3-204ENST00000466392 KCNA6P17658 529 aa17.48■□□□□ 0.39
EDEM3-204ENST00000466392 SETD1AO15047 1707 aaKnown RBP17.47■□□□□ 0.39
EDEM3-204ENST00000466392 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
EDEM3-204ENST00000466392 RGL3Q3MIN7 710 aa17.46■□□□□ 0.39
EDEM3-204ENST00000466392 TBX22Q9Y458 520 aa17.46■□□□□ 0.39
EDEM3-204ENST00000466392 PTPRUQ92729 1446 aa17.46■□□□□ 0.39
EDEM3-204ENST00000466392 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.38
EDEM3-204ENST00000466392 NKTRP30414 1462 aaKnown RBP17.45■□□□□ 0.38
EDEM3-204ENST00000466392 TMEM94Q12767 1356 aa17.45■□□□□ 0.38
EDEM3-204ENST00000466392 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
EDEM3-204ENST00000466392 ACIN1Q9UKV3 1341 aaKnown RBP17.45■□□□□ 0.38
EDEM3-204ENST00000466392 PROSER2Q86WR7 435 aaPredicted RBP17.44■□□□□ 0.38
EDEM3-204ENST00000466392 XRN1Q8IZH2 1706 aaKnown RBP17.43■□□□□ 0.38
EDEM3-204ENST00000466392 METP08581 1390 aa17.42■□□□□ 0.38
EDEM3-204ENST00000466392 TOM1O60784 492 aa17.41■□□□□ 0.38
EDEM3-204ENST00000466392 HRCP23327 699 aa17.41■□□□□ 0.38
EDEM3-204ENST00000466392 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
EDEM3-204ENST00000466392 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
EDEM3-204ENST00000466392 ADGRF5Q8IZF2 1346 aa17.4■□□□□ 0.38
EDEM3-204ENST00000466392 VGFO15240 615 aaPredicted RBP17.39■□□□□ 0.37
EDEM3-204ENST00000466392 AMOTL2Q9Y2J4 779 aa17.39■□□□□ 0.37
EDEM3-204ENST00000466392 PIK3R4Q99570 1358 aa17.39■□□□□ 0.37
EDEM3-204ENST00000466392 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.35■□□□□ 0.37
EDEM3-204ENST00000466392 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.37
EDEM3-204ENST00000466392 ASXL1Q8IXJ9 1541 aa17.33■□□□□ 0.37
EDEM3-204ENST00000466392 MSH6P52701 1360 aa17.33■□□□□ 0.36
EDEM3-204ENST00000466392 HSPA1LP34931 641 aa17.33■□□□□ 0.36
EDEM3-204ENST00000466392 C14orf37Q86TY3 774 aa17.33■□□□□ 0.36
EDEM3-204ENST00000466392 ROBO1Q9Y6N7 1651 aa17.32■□□□□ 0.36
EDEM3-204ENST00000466392 PIK3C2GO75747 1445 aa17.32■□□□□ 0.36
EDEM3-204ENST00000466392 MYOM2P54296 1465 aa17.31■□□□□ 0.36
EDEM3-204ENST00000466392 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
EDEM3-204ENST00000466392 NRXN1Q9ULB1 1477 aa17.29■□□□□ 0.36
EDEM3-204ENST00000466392 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
EDEM3-204ENST00000466392 TMEM132EQ6IEE7 984 aa17.28■□□□□ 0.36
EDEM3-204ENST00000466392 KDM2AQ9Y2K7 1162 aa17.27■□□□□ 0.36
EDEM3-204ENST00000466392 LAMC1P11047 1609 aa17.27■□□□□ 0.36
EDEM3-204ENST00000466392 NCOA3Q9Y6Q9 1424 aa17.27■□□□□ 0.35
EDEM3-204ENST00000466392 STK26Q9P289 416 aa17.26■□□□□ 0.35
EDEM3-204ENST00000466392 PTCH1Q13635 1447 aa17.26■□□□□ 0.35
EDEM3-204ENST00000466392 KNDC1Q76NI1 1749 aa17.26■□□□□ 0.35
EDEM3-204ENST00000466392 DHX57Q6P158 1386 aaKnown RBP17.26■□□□□ 0.35
EDEM3-204ENST00000466392 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
EDEM3-204ENST00000466392 DCAF11Q8TEB1 546 aa17.25■□□□□ 0.35
EDEM3-204ENST00000466392 ADGRL3Q9HAR2 1447 aa17.24■□□□□ 0.35
EDEM3-204ENST00000466392 C19orf44Q9H6X5 657 aa17.24■□□□□ 0.35
EDEM3-204ENST00000466392 SLAIN2Q9P270 581 aa17.24■□□□□ 0.35
EDEM3-204ENST00000466392 FAM135BQ49AJ0 1406 aa17.23■□□□□ 0.35
EDEM3-204ENST00000466392 PRAG1Q86YV5 1406 aa17.22■□□□□ 0.35
EDEM3-204ENST00000466392 PHLPP1O60346 1717 aa17.22■□□□□ 0.35
EDEM3-204ENST00000466392 ATF3P18847 181 aa17.22■□□□□ 0.35
EDEM3-204ENST00000466392 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
EDEM3-204ENST00000466392 YTHDC2Q9H6S0 1430 aaKnown RBP17.21■□□□□ 0.35
EDEM3-204ENST00000466392 LRPPRCP42704 1394 aaKnown RBP17.21■□□□□ 0.35
EDEM3-204ENST00000466392 PLEKHH1Q9ULM0 1364 aa17.21■□□□□ 0.35
EDEM3-204ENST00000466392 C14orf93Q9H972 538 aaKnown RBP17.21■□□□□ 0.35
EDEM3-204ENST00000466392 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
EDEM3-204ENST00000466392 CADPS2Q86UW7 1296 aa17.2■□□□□ 0.34
EDEM3-204ENST00000466392 DCCP43146 1447 aa17.2■□□□□ 0.34
EDEM3-204ENST00000466392 MST1RQ04912 1400 aa17.2■□□□□ 0.34
EDEM3-204ENST00000466392 ADGRB1O14514 1584 aa17.19■□□□□ 0.34
EDEM3-204ENST00000466392 TECPR2O15040 1411 aa17.19■□□□□ 0.34
EDEM3-204ENST00000466392 NEUROD1Q13562 356 aa17.17■□□□□ 0.34
EDEM3-204ENST00000466392 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
EDEM3-204ENST00000466392 MED1Q15648 1581 aaPredicted RBP17.16■□□□□ 0.34
EDEM3-204ENST00000466392 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
EDEM3-204ENST00000466392 BRINP3Q76B58 766 aa17.15■□□□□ 0.34
EDEM3-204ENST00000466392 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
EDEM3-204ENST00000466392 NHSL1Q5SYE7 1610 aa17.14■□□□□ 0.33
EDEM3-204ENST00000466392 DISP3Q9P2K9 1392 aa17.14■□□□□ 0.33
EDEM3-204ENST00000466392 SAFB2Q14151 953 aaKnown RBP eCLIP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms