RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
NCL-208ENST00000466274 PDIA6Q15084 440 aa10.84□□□□□ -0.67
NCL-208ENST00000466274 DIP2BQ9P265 1576 aa10.83□□□□□ -0.68
NCL-208ENST00000466274 NBR1Q14596 966 aa10.82□□□□□ -0.68
NCL-208ENST00000466274 WDR70Q9NW82 654 aa10.82□□□□□ -0.68
NCL-208ENST00000466274 ABCA10Q8WWZ4 1543 aa10.81□□□□□ -0.68
NCL-208ENST00000466274 SPDYE16A6NNV3 312 aaPredicted RBP10.81□□□□□ -0.68
NCL-208ENST00000466274 FHAD1B1AJZ9 1412 aa10.81□□□□□ -0.68
NCL-208ENST00000466274 CUX1P39880 1505 aa10.8□□□□□ -0.68
NCL-208ENST00000466274 TSR1Q2NL82 804 aaKnown RBP10.8□□□□□ -0.68
NCL-208ENST00000466274 SHROOM2Q13796 1616 aa10.8□□□□□ -0.68
NCL-208ENST00000466274 MAP3K7O43318 606 aa10.79□□□□□ -0.68
NCL-208ENST00000466274 SEPT9Q9UHD8 586 aaPredicted RBP10.79□□□□□ -0.68
NCL-208ENST00000466274 TRIM6-TRIM34B2RNG4 842 aa10.78□□□□□ -0.68
NCL-208ENST00000466274 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
NCL-208ENST00000466274 BCAMP50895 628 aa10.78□□□□□ -0.68
NCL-208ENST00000466274 EN1Q05925 392 aaPredicted RBP10.78□□□□□ -0.68
NCL-208ENST00000466274 ANKK1Q8NFD2 765 aa10.78□□□□□ -0.68
NCL-208ENST00000466274 PBRM1Q86U86 1689 aa10.77□□□□□ -0.69
NCL-208ENST00000466274 PRIM1P49642 420 aaKnown RBP10.77□□□□□ -0.69
NCL-208ENST00000466274 LAPTM4BQ86VI4 370 aa10.77□□□□□ -0.69
NCL-208ENST00000466274 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
NCL-208ENST00000466274 ZFRQ96KR1 1074 aaKnown RBP10.76□□□□□ -0.69
NCL-208ENST00000466274 ARIH1Q9Y4X5 557 aaPredicted RBP10.75□□□□□ -0.69
NCL-208ENST00000466274 DISP3Q9P2K9 1392 aa10.75□□□□□ -0.69
NCL-208ENST00000466274 ABCA5Q8WWZ7 1642 aa10.74□□□□□ -0.69
NCL-208ENST00000466274 SOWAHBA6NEL2 793 aa10.74□□□□□ -0.69
NCL-208ENST00000466274 TSKSQ9UJT2 592 aa10.73□□□□□ -0.69
NCL-208ENST00000466274 WRNQ14191 1432 aaPredicted RBP eCLIP10.73□□□□□ -0.69
NCL-208ENST00000466274 ADAMTS12P58397 1594 aa10.73□□□□□ -0.69
NCL-208ENST00000466274 ILDR2Q71H61 639 aa10.72□□□□□ -0.69
NCL-208ENST00000466274 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
NCL-208ENST00000466274 TOP2BQ02880 1626 aa10.71□□□□□ -0.69
NCL-208ENST00000466274 PLB1Q6P1J6 1458 aa10.7□□□□□ -0.7
NCL-208ENST00000466274 FAM98CQ17RN3 349 aaKnown RBP10.7□□□□□ -0.7
NCL-208ENST00000466274 IFFO2Q5TF58 517 aa10.7□□□□□ -0.7
NCL-208ENST00000466274 PACS2Q86VP3 889 aa10.7□□□□□ -0.7
NCL-208ENST00000466274 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
NCL-208ENST00000466274 ADCY10Q96PN6 1610 aa10.69□□□□□ -0.7
NCL-208ENST00000466274 TEX14Q8IWB6 1497 aa10.69□□□□□ -0.7
NCL-208ENST00000466274 OSBPP22059 807 aa10.69□□□□□ -0.7
NCL-208ENST00000466274 FAM198AQ9UFP1 575 aa10.69□□□□□ -0.7
NCL-208ENST00000466274 CDCA7LQ96GN5 454 aa10.68□□□□□ -0.7
NCL-208ENST00000466274 TSPOAP1O95153 1857 aa10.68□□□□□ -0.7
NCL-208ENST00000466274 SMAPO00193 183 aa10.67□□□□□ -0.7
NCL-208ENST00000466274 PRSS12P56730 875 aa10.67□□□□□ -0.7
NCL-208ENST00000466274 PTPRGP23470 1445 aa10.67□□□□□ -0.7
NCL-208ENST00000466274 ASXL2Q76L83 1435 aa10.67□□□□□ -0.7
NCL-208ENST00000466274 CDHR5Q9HBB8 845 aa10.66□□□□□ -0.7
NCL-208ENST00000466274 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.66□□□□□ -0.7
NCL-208ENST00000466274 ERICH3Q5RHP9 1530 aa10.66□□□□□ -0.7
NCL-208ENST00000466274 COL17A1Q9UMD9 1497 aaPredicted RBP10.66□□□□□ -0.7
NCL-208ENST00000466274 GLI2P10070 1586 aa10.65□□□□□ -0.7
NCL-208ENST00000466274 C3orf80F5H4A9 247 aa10.65□□□□□ -0.7
NCL-208ENST00000466274 LRCH3Q96II8 777 aa10.65□□□□□ -0.7
NCL-208ENST00000466274 A0A0G2JS52 829 aa10.64□□□□□ -0.71
NCL-208ENST00000466274 CERKQ8TCT0 537 aa10.64□□□□□ -0.71
NCL-208ENST00000466274 HPS5Q9UPZ3 1129 aa10.64□□□□□ -0.71
NCL-208ENST00000466274 TSR3Q9UJK0 312 aaKnown RBP10.63□□□□□ -0.71
NCL-208ENST00000466274 ABCC2Q92887 1545 aa10.63□□□□□ -0.71
NCL-208ENST00000466274 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
NCL-208ENST00000466274 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
NCL-208ENST00000466274 NYAP1Q6ZVC0 841 aa10.61□□□□□ -0.71
NCL-208ENST00000466274 TATDN2Q93075 761 aa10.6□□□□□ -0.71
NCL-208ENST00000466274 PNMA3Q9UL41 463 aa10.6□□□□□ -0.71
NCL-208ENST00000466274 KIAA0586Q9BVV6 1533 aa10.59□□□□□ -0.71
NCL-208ENST00000466274 SAMD7Q7Z3H4 446 aa10.59□□□□□ -0.71
NCL-208ENST00000466274 TNIKQ9UKE5 1360 aa10.59□□□□□ -0.71
NCL-208ENST00000466274 NPDC1Q9NQX5 325 aaPredicted RBP10.58□□□□□ -0.72
NCL-208ENST00000466274 RUSC2Q8N2Y8 1516 aa10.58□□□□□ -0.72
NCL-208ENST00000466274 CARMIL2Q6F5E8 1435 aa10.58□□□□□ -0.72
NCL-208ENST00000466274 NBPF26B4DH59 902 aa10.57□□□□□ -0.72
NCL-208ENST00000466274 RGS20O76081 388 aa10.57□□□□□ -0.72
NCL-208ENST00000466274 MLLT3P42568 568 aaPredicted RBP10.57□□□□□ -0.72
NCL-208ENST00000466274 PPP4CP60510 307 aa10.57□□□□□ -0.72
NCL-208ENST00000466274 NUDT18Q6ZVK8 323 aa10.57□□□□□ -0.72
NCL-208ENST00000466274 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
NCL-208ENST00000466274 ARHGEF1Q92888 912 aaKnown RBP10.57□□□□□ -0.72
NCL-208ENST00000466274 EPRSP07814 1512 aaKnown RBP10.57□□□□□ -0.72
NCL-208ENST00000466274 PTPRMP28827 1452 aa10.55□□□□□ -0.72
NCL-208ENST00000466274 KCNC4Q03721 635 aa10.55□□□□□ -0.72
NCL-208ENST00000466274 UHRF1BP1LA0JNW5 1464 aa10.55□□□□□ -0.72
NCL-208ENST00000466274 PPRC1Q5VV67 1664 aaKnown RBP10.54□□□□□ -0.72
NCL-208ENST00000466274 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
NCL-208ENST00000466274 UACAQ9BZF9 1416 aa10.54□□□□□ -0.72
NCL-208ENST00000466274 TTC13Q8NBP0 860 aa10.53□□□□□ -0.72
NCL-208ENST00000466274 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
NCL-208ENST00000466274 PCF11O94913 1555 aaKnown RBP10.52□□□□□ -0.73
NCL-208ENST00000466274 CD109Q6YHK3 1445 aa10.5□□□□□ -0.73
NCL-208ENST00000466274 ARID4BQ4LE39 1312 aaPredicted RBP10.5□□□□□ -0.73
NCL-208ENST00000466274 MAP3K4Q9Y6R4 1608 aa10.49□□□□□ -0.73
NCL-208ENST00000466274 RNF40O75150 1001 aa10.49□□□□□ -0.73
NCL-208ENST00000466274 HDGFP51858 240 aaKnown RBP10.49□□□□□ -0.73
NCL-208ENST00000466274 TJAP1Q5JTD0 557 aa10.48□□□□□ -0.73
NCL-208ENST00000466274 MAGI3Q5TCQ9 1506 aa10.48□□□□□ -0.73
NCL-208ENST00000466274 KDM5BQ9UGL1 1544 aa10.48□□□□□ -0.73
NCL-208ENST00000466274 HSPA2P54652 639 aa10.47□□□□□ -0.73
NCL-208ENST00000466274 IRX2Q9BZI1 471 aaPredicted RBP10.47□□□□□ -0.73
NCL-208ENST00000466274 SPATA31D1Q6ZQQ2 1576 aa10.47□□□□□ -0.73
NCL-208ENST00000466274 SWT1Q5T5J6 900 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms