RNA–Protein interactions for RNA: ENST00000466124.1

PRKCB-204, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-204ENST00000466124 UPF1Q92900 1129 aaKnown RBP eCLIP8.88□□□□□ -0.99
PRKCB-204ENST00000466124 PRDM15P57071 1507 aaPredicted RBP8.88□□□□□ -0.99
PRKCB-204ENST00000466124 NKTRP30414 1462 aaKnown RBP8.88□□□□□ -0.99
PRKCB-204ENST00000466124 TMEM2Q9UHN6 1383 aa8.87□□□□□ -0.99
PRKCB-204ENST00000466124 NWD1Q149M9 1564 aa8.87□□□□□ -0.99
PRKCB-204ENST00000466124 KCNA6P17658 529 aa8.87□□□□□ -0.99
PRKCB-204ENST00000466124 EID1Q9Y6B2 187 aa8.87□□□□□ -0.99
PRKCB-204ENST00000466124 TET3O43151 1660 aa8.87□□□□□ -0.99
PRKCB-204ENST00000466124 PIK3C2BO00750 1634 aa8.87□□□□□ -0.99
PRKCB-204ENST00000466124 PHLPP1O60346 1717 aa8.86□□□□□ -0.99
PRKCB-204ENST00000466124 CFAP65Q6ZU64 1925 aaKnown RBP8.86□□□□□ -0.99
PRKCB-204ENST00000466124 KDM5AP29375 1690 aaKnown RBP8.86□□□□□ -0.99
PRKCB-204ENST00000466124 COL16A1Q07092 1604 aaPredicted RBP8.86□□□□□ -0.99
PRKCB-204ENST00000466124 LRP6O75581 1613 aa8.85□□□□□ -0.99
PRKCB-204ENST00000466124 FGD6Q6ZV73 1430 aa8.85□□□□□ -0.99
PRKCB-204ENST00000466124 MSH6P52701 1360 aa8.85□□□□□ -0.99
PRKCB-204ENST00000466124 EFCAB6Q5THR3 1501 aa8.85□□□□□ -0.99
PRKCB-204ENST00000466124 DUOX2Q9NRD8 1548 aa8.85□□□□□ -0.99
PRKCB-204ENST00000466124 SRCAPQ6ZRS2 3230 aa8.84□□□□□ -0.99
PRKCB-204ENST00000466124 PROSER2Q86WR7 435 aaPredicted RBP8.84□□□□□ -0.99
PRKCB-204ENST00000466124 SPATA31A6Q5VVP1 1343 aa8.83□□□□□ -1
PRKCB-204ENST00000466124 ZNF772Q68DY9 489 aaPredicted RBP8.83□□□□□ -1
PRKCB-204ENST00000466124 SLAIN2Q9P270 581 aa8.83□□□□□ -1
PRKCB-204ENST00000466124 CDK12Q9NYV4 1490 aaPredicted RBP8.83□□□□□ -1
PRKCB-204ENST00000466124 RBM33Q96EV2 1170 aaKnown RBP8.82□□□□□ -1
PRKCB-204ENST00000466124 ERBINQ96RT1 1412 aa8.81□□□□□ -1
PRKCB-204ENST00000466124 AHDC1Q5TGY3 1603 aaPredicted RBP8.81□□□□□ -1
PRKCB-204ENST00000466124 TRIM52Q96A61 297 aa8.81□□□□□ -1
PRKCB-204ENST00000466124 SLC26A8Q96RN1 970 aa8.81□□□□□ -1
PRKCB-204ENST00000466124 SHPRHQ149N8 1683 aa8.81□□□□□ -1
PRKCB-204ENST00000466124 ADGRB3O60242 1522 aa8.8□□□□□ -1
PRKCB-204ENST00000466124 LMTK2Q8IWU2 1503 aa8.8□□□□□ -1
PRKCB-204ENST00000466124 STAG3Q9UJ98 1225 aa8.8□□□□□ -1
PRKCB-204ENST00000466124 NCOA3Q9Y6Q9 1424 aa8.8□□□□□ -1
PRKCB-204ENST00000466124 IDI1Q13907 227 aa8.79□□□□□ -1
PRKCB-204ENST00000466124 CHD2O14647 1828 aaKnown RBP8.79□□□□□ -1
PRKCB-204ENST00000466124 NOS1P29475 1434 aa8.79□□□□□ -1
PRKCB-204ENST00000466124 KIF15Q9NS87 1388 aa8.78□□□□□ -1
PRKCB-204ENST00000466124 RXRBP28702 533 aa8.78□□□□□ -1
PRKCB-204ENST00000466124 MEX3CQ5U5Q3 659 aaKnown RBP8.78□□□□□ -1
PRKCB-204ENST00000466124 MYOM3Q5VTT5 1437 aa8.78□□□□□ -1
PRKCB-204ENST00000466124 DIP2AQ14689 1571 aa8.78□□□□□ -1
PRKCB-204ENST00000466124 PLEKHG1Q9ULL1 1385 aa8.77□□□□□ -1.01
PRKCB-204ENST00000466124 ZBTB12Q9Y330 459 aaPredicted RBP8.77□□□□□ -1.01
PRKCB-204ENST00000466124 ZFYVE9O95405 1425 aa8.77□□□□□ -1.01
PRKCB-204ENST00000466124 KANK1Q14678 1352 aa8.76□□□□□ -1.01
PRKCB-204ENST00000466124 CROCC2H7BZ55 1655 aa8.76□□□□□ -1.01
PRKCB-204ENST00000466124 SPDYE4A6NLX3 237 aa8.76□□□□□ -1.01
PRKCB-204ENST00000466124 RGS12O14924 1447 aa8.75□□□□□ -1.01
PRKCB-204ENST00000466124 ABCC5O15440 1437 aa8.75□□□□□ -1.01
PRKCB-204ENST00000466124 SLC52A1Q9NWF4 448 aa8.75□□□□□ -1.01
PRKCB-204ENST00000466124 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.74□□□□□ -1.01
PRKCB-204ENST00000466124 CADPS2Q86UW7 1296 aa8.74□□□□□ -1.01
PRKCB-204ENST00000466124 SETD5Q9C0A6 1442 aa8.73□□□□□ -1.01
PRKCB-204ENST00000466124 BCANQ96GW7 911 aa8.73□□□□□ -1.01
PRKCB-204ENST00000466124 C19orf44Q9H6X5 657 aa8.73□□□□□ -1.01
PRKCB-204ENST00000466124 RRP7BPQ9NSQ0 103 aa8.73□□□□□ -1.01
PRKCB-204ENST00000466124 TBX22Q9Y458 520 aa8.73□□□□□ -1.01
PRKCB-204ENST00000466124 AFF2P51816 1311 aa8.73□□□□□ -1.01
PRKCB-204ENST00000466124 PIK3R4Q99570 1358 aa8.73□□□□□ -1.01
PRKCB-204ENST00000466124 ADAMTS13Q76LX8 1427 aa8.72□□□□□ -1.01
PRKCB-204ENST00000466124 RIMS2Q9UQ26 1411 aa8.72□□□□□ -1.01
PRKCB-204ENST00000466124 RPRD2Q5VT52 1461 aaKnown RBP8.72□□□□□ -1.01
PRKCB-204ENST00000466124 BRINP3Q76B58 766 aa8.72□□□□□ -1.01
PRKCB-204ENST00000466124 DCCP43146 1447 aa8.71□□□□□ -1.01
PRKCB-204ENST00000466124 ASXL1Q8IXJ9 1541 aa8.71□□□□□ -1.01
PRKCB-204ENST00000466124 ATF3P18847 181 aa8.71□□□□□ -1.02
PRKCB-204ENST00000466124 RBM6P78332 1123 aaKnown RBP8.71□□□□□ -1.02
PRKCB-204ENST00000466124 TMEM131LA2VDJ0 1609 aa8.71□□□□□ -1.02
PRKCB-204ENST00000466124 NHSL1Q5SYE7 1610 aa8.71□□□□□ -1.02
PRKCB-204ENST00000466124 GCC2Q8IWJ2 1684 aa8.71□□□□□ -1.02
PRKCB-204ENST00000466124 DAPK1P53355 1430 aa8.71□□□□□ -1.02
PRKCB-204ENST00000466124 MYO5BQ9ULV0 1848 aa8.7□□□□□ -1.02
PRKCB-204ENST00000466124 NUTM2BA6NNL0 878 aaPredicted RBP8.7□□□□□ -1.02
PRKCB-204ENST00000466124 NUTM2EB1AL46 878 aaPredicted RBP8.7□□□□□ -1.02
PRKCB-204ENST00000466124 PPP1R15AO75807 674 aaPredicted RBP8.7□□□□□ -1.02
PRKCB-204ENST00000466124 HDGFP51858 240 aaKnown RBP8.7□□□□□ -1.02
PRKCB-204ENST00000466124 C14orf37Q86TY3 774 aa8.7□□□□□ -1.02
PRKCB-204ENST00000466124 NUTM2AQ8IVF1 878 aaPredicted RBP8.7□□□□□ -1.02
PRKCB-204ENST00000466124 VPS8Q8N3P4 1428 aa8.7□□□□□ -1.02
PRKCB-204ENST00000466124 KANK4Q5T7N3 995 aaPredicted RBP8.69□□□□□ -1.02
PRKCB-204ENST00000466124 ANKRD30AQ9BXX3 1397 aa8.69□□□□□ -1.02
PRKCB-204ENST00000466124 PTPN23Q9H3S7 1636 aa8.69□□□□□ -1.02
PRKCB-204ENST00000466124 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.68□□□□□ -1.02
PRKCB-204ENST00000466124 QTRT2Q9H974 415 aaKnown RBP8.68□□□□□ -1.02
PRKCB-204ENST00000466124 ATAD2Q6PL18 1390 aa8.68□□□□□ -1.02
PRKCB-204ENST00000466124 MST1RQ04912 1400 aa8.68□□□□□ -1.02
PRKCB-204ENST00000466124 TRPM2O94759 1503 aa8.68□□□□□ -1.02
PRKCB-204ENST00000466124 NUTM2DQ5VT03 806 aaPredicted RBP8.67□□□□□ -1.02
PRKCB-204ENST00000466124 PNPLA6Q8IY17 1366 aa8.67□□□□□ -1.02
PRKCB-204ENST00000466124 PTPRUQ92729 1446 aa8.67□□□□□ -1.02
PRKCB-204ENST00000466124 LRRC59Q96AG4 307 aaKnown RBP8.67□□□□□ -1.02
PRKCB-204ENST00000466124 SETBP1Q9Y6X0 1596 aa8.67□□□□□ -1.02
PRKCB-204ENST00000466124 EP400Q96L91 3159 aa8.67□□□□□ -1.02
PRKCB-204ENST00000466124 XRN1Q8IZH2 1706 aaKnown RBP8.66□□□□□ -1.02
PRKCB-204ENST00000466124 ADGRL2O95490 1459 aa8.66□□□□□ -1.02
PRKCB-204ENST00000466124 NGLY1Q96IV0 654 aa8.66□□□□□ -1.02
PRKCB-204ENST00000466124 C8orf37Q96NL8 207 aa8.66□□□□□ -1.02
PRKCB-204ENST00000466124 ZRANB1Q9UGI0 708 aa8.66□□□□□ -1.02
PRKCB-204ENST00000466124 AMOTL2Q9Y2J4 779 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms