RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
CNNM3-203ENST00000465224 EIF2AK4Q9P2K8 1649 aaKnown RBP13.13□□□□□ -0.31
CNNM3-203ENST00000465224 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
CNNM3-203ENST00000465224 ABCC1P33527 1531 aa13.12□□□□□ -0.31
CNNM3-203ENST00000465224 WDR7Q9Y4E6 1490 aa13.12□□□□□ -0.31
CNNM3-203ENST00000465224 NEFMP07197 916 aa13.12□□□□□ -0.31
CNNM3-203ENST00000465224 PDE3BQ13370 1112 aa13.12□□□□□ -0.31
CNNM3-203ENST00000465224 SPAG9O60271 1321 aaKnown RBP13.11□□□□□ -0.31
CNNM3-203ENST00000465224 PLIN1O60240 522 aa13.11□□□□□ -0.31
CNNM3-203ENST00000465224 BLMP54132 1417 aaPredicted RBP13.1□□□□□ -0.31
CNNM3-203ENST00000465224 ASXL2Q76L83 1435 aa13.1□□□□□ -0.31
CNNM3-203ENST00000465224 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
CNNM3-203ENST00000465224 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
CNNM3-203ENST00000465224 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
CNNM3-203ENST00000465224 CYB5RLQ6IPT4 315 aa13.1□□□□□ -0.31
CNNM3-203ENST00000465224 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
CNNM3-203ENST00000465224 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
CNNM3-203ENST00000465224 USP35Q9P2H5 1018 aa13.09□□□□□ -0.31
CNNM3-203ENST00000465224 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
CNNM3-203ENST00000465224 LAS1LQ9Y4W2 734 aaKnown RBP13.08□□□□□ -0.32
CNNM3-203ENST00000465224 PPP2R1AP30153 589 aa13.07□□□□□ -0.32
CNNM3-203ENST00000465224 AMER1Q5JTC6 1135 aaPredicted RBP13.07□□□□□ -0.32
CNNM3-203ENST00000465224 KNSTRNQ9Y448 316 aa13.06□□□□□ -0.32
CNNM3-203ENST00000465224 ZFYVE16Q7Z3T8 1539 aa13.06□□□□□ -0.32
CNNM3-203ENST00000465224 PTPRTO14522 1441 aa13.06□□□□□ -0.32
CNNM3-203ENST00000465224 CLTCL1P53675 1640 aa13.05□□□□□ -0.32
CNNM3-203ENST00000465224 TRPM2O94759 1503 aa13.05□□□□□ -0.32
CNNM3-203ENST00000465224 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
CNNM3-203ENST00000465224 INSRP06213 1382 aa13.05□□□□□ -0.32
CNNM3-203ENST00000465224 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
CNNM3-203ENST00000465224 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
CNNM3-203ENST00000465224 CRBNQ96SW2 442 aa13.04□□□□□ -0.32
CNNM3-203ENST00000465224 ABCA9Q8IUA7 1624 aa13.04□□□□□ -0.32
CNNM3-203ENST00000465224 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
CNNM3-203ENST00000465224 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
CNNM3-203ENST00000465224 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
CNNM3-203ENST00000465224 SCAF11Q99590 1463 aaKnown RBP13.03□□□□□ -0.32
CNNM3-203ENST00000465224 KIF3BO15066 747 aa13.03□□□□□ -0.32
CNNM3-203ENST00000465224 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
CNNM3-203ENST00000465224 SPHKAPQ2M3C7 1700 aa13.02□□□□□ -0.32
CNNM3-203ENST00000465224 GSE1Q14687 1217 aa13.02□□□□□ -0.32
CNNM3-203ENST00000465224 CEP152O94986 1710 aa13.02□□□□□ -0.32
CNNM3-203ENST00000465224 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.33
CNNM3-203ENST00000465224 CFAP70Q5T0N1 1121 aa13.01□□□□□ -0.33
CNNM3-203ENST00000465224 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
CNNM3-203ENST00000465224 DEPDC5O75140 1603 aa13□□□□□ -0.33
CNNM3-203ENST00000465224 PDE4AP27815 886 aa13□□□□□ -0.33
CNNM3-203ENST00000465224 WDR43Q15061 677 aaKnown RBP eCLIP13□□□□□ -0.33
CNNM3-203ENST00000465224 UGGT1Q9NYU2 1555 aa13□□□□□ -0.33
CNNM3-203ENST00000465224 ADGRF5Q8IZF2 1346 aa13□□□□□ -0.33
CNNM3-203ENST00000465224 DUSP27Q5VZP5 1158 aa13□□□□□ -0.33
CNNM3-203ENST00000465224 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
CNNM3-203ENST00000465224 FAM43AQ8N2R8 423 aa12.99□□□□□ -0.33
CNNM3-203ENST00000465224 ARAP3Q8WWN8 1544 aa12.99□□□□□ -0.33
CNNM3-203ENST00000465224 FANCAO15360 1455 aa12.99□□□□□ -0.33
CNNM3-203ENST00000465224 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
CNNM3-203ENST00000465224 ATP7AQ04656 1500 aa12.99□□□□□ -0.33
CNNM3-203ENST00000465224 TET3O43151 1660 aa12.98□□□□□ -0.33
CNNM3-203ENST00000465224 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
CNNM3-203ENST00000465224 SYNMO15061 1565 aa12.98□□□□□ -0.33
CNNM3-203ENST00000465224 HSP90AA2PQ14568 343 aaPredicted RBP12.98□□□□□ -0.33
CNNM3-203ENST00000465224 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
CNNM3-203ENST00000465224 CCDC146Q8IYE0 955 aa12.98□□□□□ -0.33
CNNM3-203ENST00000465224 ASXL1Q8IXJ9 1541 aa12.98□□□□□ -0.33
CNNM3-203ENST00000465224 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
CNNM3-203ENST00000465224 BACH2Q9BYV9 841 aa12.98□□□□□ -0.33
CNNM3-203ENST00000465224 MYOM1P52179 1685 aa12.98□□□□□ -0.33
CNNM3-203ENST00000465224 KANK1Q14678 1352 aa12.98□□□□□ -0.33
CNNM3-203ENST00000465224 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
CNNM3-203ENST00000465224 CARD14Q9BXL6 1004 aa12.97□□□□□ -0.33
CNNM3-203ENST00000465224 INO80Q9ULG1 1556 aaPredicted RBP12.97□□□□□ -0.33
CNNM3-203ENST00000465224 FRAT1Q92837 279 aaPredicted RBP12.96□□□□□ -0.33
CNNM3-203ENST00000465224 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
CNNM3-203ENST00000465224 CD109Q6YHK3 1445 aa12.96□□□□□ -0.34
CNNM3-203ENST00000465224 MROH1Q8NDA8 1641 aa12.95□□□□□ -0.34
CNNM3-203ENST00000465224 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
CNNM3-203ENST00000465224 ADGRL1O94910 1474 aa12.95□□□□□ -0.34
CNNM3-203ENST00000465224 MS4A1P11836 297 aa12.94□□□□□ -0.34
CNNM3-203ENST00000465224 PIK3C2GO75747 1445 aa12.94□□□□□ -0.34
CNNM3-203ENST00000465224 ERVK-7P63135 1459 aa12.94□□□□□ -0.34
CNNM3-203ENST00000465224 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
CNNM3-203ENST00000465224 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
CNNM3-203ENST00000465224 APAF1O14727 1248 aa12.93□□□□□ -0.34
CNNM3-203ENST00000465224 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
CNNM3-203ENST00000465224 TAF7LQ5H9L4 462 aa12.93□□□□□ -0.34
CNNM3-203ENST00000465224 NPC1L1Q9UHC9 1359 aa12.93□□□□□ -0.34
CNNM3-203ENST00000465224 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
CNNM3-203ENST00000465224 MAP3K4Q9Y6R4 1608 aa12.92□□□□□ -0.34
CNNM3-203ENST00000465224 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
CNNM3-203ENST00000465224 KDM2BQ8NHM5 1336 aa12.92□□□□□ -0.34
CNNM3-203ENST00000465224 KIAA1210Q9ULL0 1709 aa12.92□□□□□ -0.34
CNNM3-203ENST00000465224 RRP9O43818 475 aaKnown RBP12.92□□□□□ -0.34
CNNM3-203ENST00000465224 TRMT2AQ8IZ69 625 aaKnown RBP12.92□□□□□ -0.34
CNNM3-203ENST00000465224 KDM5AP29375 1690 aaKnown RBP12.91□□□□□ -0.34
CNNM3-203ENST00000465224 MYOM2P54296 1465 aa12.9□□□□□ -0.34
CNNM3-203ENST00000465224 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.34
CNNM3-203ENST00000465224 MROH2AA6NES4 1674 aa12.9□□□□□ -0.35
CNNM3-203ENST00000465224 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
CNNM3-203ENST00000465224 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
CNNM3-203ENST00000465224 BCAR3O75815 825 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms