RNA–Protein interactions for RNA: ENST00000463943.1

BCAS4-204, Transcript of breast carcinoma amplified sequence 4, humanhuman

TSL 1 (best)

Gene BCAS4, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-204ENST00000463943 RIMS2Q9UQ26 1411 aa28.65■■■□□ 2.18
BCAS4-204ENST00000463943 ZNF326Q5BKZ1 582 aaKnown RBP28.63■■■□□ 2.17
BCAS4-204ENST00000463943 NUTM2DQ5VT03 806 aaPredicted RBP28.63■■■□□ 2.17
BCAS4-204ENST00000463943 SENP3Q9H4L4 574 aaPredicted RBP28.6■■■□□ 2.17
BCAS4-204ENST00000463943 ANKRD30BQ9BXX2 1392 aa28.59■■■□□ 2.17
BCAS4-204ENST00000463943 PPP1R15AO75807 674 aaPredicted RBP28.59■■■□□ 2.17
BCAS4-204ENST00000463943 PCGF6Q9BYE7 350 aa28.58■■■□□ 2.17
BCAS4-204ENST00000463943 HDGFP51858 240 aaKnown RBP28.56■■■□□ 2.16
BCAS4-204ENST00000463943 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.55■■■□□ 2.16
BCAS4-204ENST00000463943 ZNF335Q9H4Z2 1342 aaPredicted RBP28.55■■■□□ 2.16
BCAS4-204ENST00000463943 NEXMIFQ5QGS0 1516 aa28.54■■■□□ 2.16
BCAS4-204ENST00000463943 BCANQ96GW7 911 aa28.53■■■□□ 2.16
BCAS4-204ENST00000463943 PLEKHG1Q9ULL1 1385 aa28.52■■■□□ 2.16
BCAS4-204ENST00000463943 RGL3Q3MIN7 710 aa28.52■■■□□ 2.16
BCAS4-204ENST00000463943 SPATA31E1Q6ZUB1 1445 aa28.52■■■□□ 2.16
BCAS4-204ENST00000463943 SLC26A8Q96RN1 970 aa28.49■■■□□ 2.15
BCAS4-204ENST00000463943 LTBP4Q8N2S1 1624 aa28.47■■■□□ 2.15
BCAS4-204ENST00000463943 DHX57Q6P158 1386 aaKnown RBP28.47■■■□□ 2.15
BCAS4-204ENST00000463943 PPLO60437 1756 aa28.46■■■□□ 2.15
BCAS4-204ENST00000463943 RPGRIP1LQ68CZ1 1315 aa28.45■■■□□ 2.14
BCAS4-204ENST00000463943 ADAMTS13Q76LX8 1427 aa28.42■■■□□ 2.14
BCAS4-204ENST00000463943 IFT172Q9UG01 1749 aa28.41■■■□□ 2.14
BCAS4-204ENST00000463943 VGFO15240 615 aaPredicted RBP28.4■■■□□ 2.14
BCAS4-204ENST00000463943 NRXN3Q9Y4C0 1643 aa28.4■■■□□ 2.14
BCAS4-204ENST00000463943 STRCP1A6NGW2 1772 aa28.4■■■□□ 2.14
BCAS4-204ENST00000463943 SETBP1Q9Y6X0 1596 aa28.38■■■□□ 2.13
BCAS4-204ENST00000463943 CERKQ8TCT0 537 aa28.37■■■□□ 2.13
BCAS4-204ENST00000463943 DIP2AQ14689 1571 aa28.35■■■□□ 2.13
BCAS4-204ENST00000463943 TBX22Q9Y458 520 aa28.35■■■□□ 2.13
BCAS4-204ENST00000463943 ADGRF5Q8IZF2 1346 aa28.35■■■□□ 2.13
BCAS4-204ENST00000463943 CPS1P31327 1500 aa28.33■■■□□ 2.13
BCAS4-204ENST00000463943 SIN3AQ96ST3 1273 aa28.32■■■□□ 2.12
BCAS4-204ENST00000463943 KCNA6P17658 529 aa28.29■■■□□ 2.12
BCAS4-204ENST00000463943 CHD2O14647 1828 aaKnown RBP28.29■■■□□ 2.12
BCAS4-204ENST00000463943 NWD1Q149M9 1564 aa28.28■■■□□ 2.12
BCAS4-204ENST00000463943 METP08581 1390 aa28.27■■■□□ 2.12
BCAS4-204ENST00000463943 ALKQ9UM73 1620 aa28.27■■■□□ 2.12
BCAS4-204ENST00000463943 MYOM2P54296 1465 aa28.27■■■□□ 2.12
BCAS4-204ENST00000463943 DCAF11Q8TEB1 546 aa28.27■■■□□ 2.12
BCAS4-204ENST00000463943 SETD1AO15047 1707 aaKnown RBP28.26■■■□□ 2.11
BCAS4-204ENST00000463943 NEUROD1Q13562 356 aa28.26■■■□□ 2.11
BCAS4-204ENST00000463943 PIK3C2GO75747 1445 aa28.25■■■□□ 2.11
BCAS4-204ENST00000463943 LRRC7Q96NW7 1537 aa28.25■■■□□ 2.11
BCAS4-204ENST00000463943 KDM2AQ9Y2K7 1162 aa28.25■■■□□ 2.11
BCAS4-204ENST00000463943 PIK3R4Q99570 1358 aa28.25■■■□□ 2.11
BCAS4-204ENST00000463943 PTPRUQ92729 1446 aa28.25■■■□□ 2.11
BCAS4-204ENST00000463943 NRXN1Q9ULB1 1477 aa28.22■■■□□ 2.11
BCAS4-204ENST00000463943 NKTRP30414 1462 aaKnown RBP28.21■■■□□ 2.11
BCAS4-204ENST00000463943 RBM33Q96EV2 1170 aaKnown RBP28.21■■■□□ 2.11
BCAS4-204ENST00000463943 AMOTL2Q9Y2J4 779 aa28.21■■■□□ 2.11
BCAS4-204ENST00000463943 IQSEC2Q5JU85 1478 aa28.2■■■□□ 2.1
BCAS4-204ENST00000463943 XIRP1Q702N8 1843 aaKnown RBP28.17■■■□□ 2.1
BCAS4-204ENST00000463943 PROSER2Q86WR7 435 aaPredicted RBP28.17■■■□□ 2.1
BCAS4-204ENST00000463943 XRN1Q8IZH2 1706 aaKnown RBP28.17■■■□□ 2.1
BCAS4-204ENST00000463943 TMEM94Q12767 1356 aa28.16■■■□□ 2.1
BCAS4-204ENST00000463943 CFAP70Q5T0N1 1121 aa28.15■■■□□ 2.1
BCAS4-204ENST00000463943 ASXL1Q8IXJ9 1541 aa28.13■■■□□ 2.09
BCAS4-204ENST00000463943 L3MBTL2Q969R5 705 aa28.13■■■□□ 2.09
BCAS4-204ENST00000463943 STAC3Q96MF2 364 aa28.13■■■□□ 2.09
BCAS4-204ENST00000463943 TMEM132EQ6IEE7 984 aa28.12■■■□□ 2.09
BCAS4-204ENST00000463943 C14orf93Q9H972 538 aaKnown RBP28.12■■■□□ 2.09
BCAS4-204ENST00000463943 LAMC1P11047 1609 aa28.11■■■□□ 2.09
BCAS4-204ENST00000463943 FBXO41Q8TF61 875 aa28.09■■■□□ 2.09
BCAS4-204ENST00000463943 UBAP1LF5GYI3 381 aa28.06■■■□□ 2.08
BCAS4-204ENST00000463943 STK26Q9P289 416 aa28.06■■■□□ 2.08
BCAS4-204ENST00000463943 PRAG1Q86YV5 1406 aa28.04■■■□□ 2.08
BCAS4-204ENST00000463943 TONSLQ96HA7 1378 aa28.04■■■□□ 2.08
BCAS4-204ENST00000463943 ROBO2Q9HCK4 1378 aa28.04■■■□□ 2.08
BCAS4-204ENST00000463943 PTCH1Q13635 1447 aa28.03■■■□□ 2.08
BCAS4-204ENST00000463943 YTHDC2Q9H6S0 1430 aaKnown RBP28.03■■■□□ 2.08
BCAS4-204ENST00000463943 C14orf37Q86TY3 774 aa28.02■■■□□ 2.08
BCAS4-204ENST00000463943 CCER1Q8TC90 406 aaPredicted RBP28.02■■■□□ 2.08
BCAS4-204ENST00000463943 LRPPRCP42704 1394 aaKnown RBP28.02■■■□□ 2.08
BCAS4-204ENST00000463943 ADGRB1O14514 1584 aa28.02■■■□□ 2.08
BCAS4-204ENST00000463943 ILDR1Q86SU0 546 aaPredicted RBP28.02■■■□□ 2.08
BCAS4-204ENST00000463943 TOM1O60784 492 aa28■■■□□ 2.07
BCAS4-204ENST00000463943 MSH6P52701 1360 aa28■■■□□ 2.07
BCAS4-204ENST00000463943 NCOA3Q9Y6Q9 1424 aa28■■■□□ 2.07
BCAS4-204ENST00000463943 KNDC1Q76NI1 1749 aa27.99■■■□□ 2.07
BCAS4-204ENST00000463943 TECPR2O15040 1411 aa27.98■■■□□ 2.07
BCAS4-204ENST00000463943 ABCC11Q96J66 1382 aa27.98■■■□□ 2.07
BCAS4-204ENST00000463943 CLSPNQ9HAW4 1339 aa27.98■■■□□ 2.07
BCAS4-204ENST00000463943 PIP4K2BP78356 416 aa27.95■■■□□ 2.07
BCAS4-204ENST00000463943 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.95■■■□□ 2.07
BCAS4-204ENST00000463943 KIAA1210Q9ULL0 1709 aa27.95■■■□□ 2.07
BCAS4-204ENST00000463943 SCAF1Q9H7N4 1312 aaKnown RBP27.95■■■□□ 2.06
BCAS4-204ENST00000463943 NALCNQ8IZF0 1738 aa27.95■■■□□ 2.06
BCAS4-204ENST00000463943 NBPF1Q3BBV0 1214 aa27.94■■■□□ 2.06
BCAS4-204ENST00000463943 WAPLQ7Z5K2 1190 aa27.94■■■□□ 2.06
BCAS4-204ENST00000463943 C19orf44Q9H6X5 657 aa27.94■■■□□ 2.06
BCAS4-204ENST00000463943 PLEKHH1Q9ULM0 1364 aa27.93■■■□□ 2.06
BCAS4-204ENST00000463943 ADGRL3Q9HAR2 1447 aa27.92■■■□□ 2.06
BCAS4-204ENST00000463943 TRAK1Q9UPV9 953 aa27.92■■■□□ 2.06
BCAS4-204ENST00000463943 TRPM1Q7Z4N2 1603 aa27.9■■■□□ 2.06
BCAS4-204ENST00000463943 NBPF8Q3BBV2 869 aa27.89■■■□□ 2.06
BCAS4-204ENST00000463943 ATF3P18847 181 aa27.88■■■□□ 2.05
BCAS4-204ENST00000463943 DLC1Q96QB1 1528 aa27.87■■■□□ 2.05
BCAS4-204ENST00000463943 FAM135BQ49AJ0 1406 aa27.87■■■□□ 2.05
BCAS4-204ENST00000463943 PRAM1Q96QH2 718 aa27.87■■■□□ 2.05
BCAS4-204ENST00000463943 SAFB2Q14151 953 aaKnown RBP eCLIP27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms