RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 CAMSAP2Q08AD1 1489 aa22.05■■□□□ 1.12
C9orf3-211ENST00000463372 BCANQ96GW7 911 aa22.05■■□□□ 1.12
C9orf3-211ENST00000463372 CHD2O14647 1828 aaKnown RBP22.04■■□□□ 1.12
C9orf3-211ENST00000463372 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
C9orf3-211ENST00000463372 CADPS2Q86UW7 1296 aa22.03■■□□□ 1.12
C9orf3-211ENST00000463372 IFFO2Q5TF58 517 aa22.02■■□□□ 1.12
C9orf3-211ENST00000463372 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.01■■□□□ 1.11
C9orf3-211ENST00000463372 ATF3P18847 181 aa22.01■■□□□ 1.11
C9orf3-211ENST00000463372 EFCAB6Q5THR3 1501 aa22.01■■□□□ 1.11
C9orf3-211ENST00000463372 NCOA3Q9Y6Q9 1424 aa21.99■■□□□ 1.11
C9orf3-211ENST00000463372 RSPH4AQ5TD94 716 aa21.99■■□□□ 1.11
C9orf3-211ENST00000463372 EIF2AK4Q9P2K8 1649 aaKnown RBP21.96■■□□□ 1.11
C9orf3-211ENST00000463372 MTUS2Q5JR59 1369 aa21.96■■□□□ 1.11
C9orf3-211ENST00000463372 SETD5Q9C0A6 1442 aa21.96■■□□□ 1.11
C9orf3-211ENST00000463372 YY1P25490 414 aa21.95■■□□□ 1.1
C9orf3-211ENST00000463372 BRINP3Q76B58 766 aa21.95■■□□□ 1.1
C9orf3-211ENST00000463372 LRRC59Q96AG4 307 aaKnown RBP21.95■■□□□ 1.1
C9orf3-211ENST00000463372 C19orf44Q9H6X5 657 aa21.95■■□□□ 1.1
C9orf3-211ENST00000463372 TRPC5Q9UL62 973 aaPredicted RBP21.95■■□□□ 1.1
C9orf3-211ENST00000463372 MAST1Q9Y2H9 1570 aa21.95■■□□□ 1.1
C9orf3-211ENST00000463372 MROH1Q8NDA8 1641 aa21.94■■□□□ 1.1
C9orf3-211ENST00000463372 TSPY4P0CV99 314 aa21.93■■□□□ 1.1
C9orf3-211ENST00000463372 TSPY10P0CW01 314 aa21.93■■□□□ 1.1
C9orf3-211ENST00000463372 USP21Q9UK80 565 aa21.93■■□□□ 1.1
C9orf3-211ENST00000463372 ADAMTS2O95450 1211 aa21.92■■□□□ 1.1
C9orf3-211ENST00000463372 NHSL1Q5SYE7 1610 aa21.91■■□□□ 1.1
C9orf3-211ENST00000463372 ARHGAP31Q2M1Z3 1444 aa21.91■■□□□ 1.1
C9orf3-211ENST00000463372 BLMP54132 1417 aaPredicted RBP21.89■■□□□ 1.09
C9orf3-211ENST00000463372 ASXL1Q8IXJ9 1541 aa21.88■■□□□ 1.09
C9orf3-211ENST00000463372 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
C9orf3-211ENST00000463372 SF3B2Q13435 895 aaKnown RBP21.85■■□□□ 1.09
C9orf3-211ENST00000463372 IDI1Q13907 227 aa21.85■■□□□ 1.09
C9orf3-211ENST00000463372 DEFB132Q7Z7B7 95 aa21.85■■□□□ 1.09
C9orf3-211ENST00000463372 ARHGEF5Q12774 1597 aa21.84■■□□□ 1.09
C9orf3-211ENST00000463372 HRCP23327 699 aa21.83■■□□□ 1.09
C9orf3-211ENST00000463372 ATRNO75882 1429 aa21.82■■□□□ 1.08
C9orf3-211ENST00000463372 PSDA5PKW4 1024 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-211ENST00000463372 PLEKHG1Q9ULL1 1385 aa21.8■■□□□ 1.08
C9orf3-211ENST00000463372 ADGRB3O60242 1522 aa21.8■■□□□ 1.08
C9orf3-211ENST00000463372 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
C9orf3-211ENST00000463372 EHBP1L1Q8N3D4 1523 aa21.79■■□□□ 1.08
C9orf3-211ENST00000463372 FNBP4Q8N3X1 1017 aaPredicted RBP21.78■■□□□ 1.08
C9orf3-211ENST00000463372 TBX22Q9Y458 520 aa21.77■■□□□ 1.08
C9orf3-211ENST00000463372 DCCP43146 1447 aa21.76■■□□□ 1.07
C9orf3-211ENST00000463372 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
C9orf3-211ENST00000463372 HDGFP51858 240 aaKnown RBP21.75■■□□□ 1.07
C9orf3-211ENST00000463372 MYO5BQ9ULV0 1848 aa21.73■■□□□ 1.07
C9orf3-211ENST00000463372 DDX17Q92841 729 aaKnown RBP21.73■■□□□ 1.07
C9orf3-211ENST00000463372 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
C9orf3-211ENST00000463372 BCL9LQ86UU0 1499 aa21.72■■□□□ 1.07
C9orf3-211ENST00000463372 UNC13BO14795 1591 aa21.71■■□□□ 1.07
C9orf3-211ENST00000463372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.71■■□□□ 1.071e-6■■□□□ 11.7
C9orf3-211ENST00000463372 BRWD3Q6RI45 1802 aa21.71■■□□□ 1.07
C9orf3-211ENST00000463372 MST1RQ04912 1400 aa21.71■■□□□ 1.07
C9orf3-211ENST00000463372 DUOX2Q9NRD8 1548 aa21.7■■□□□ 1.07
C9orf3-211ENST00000463372 GJD4Q96KN9 370 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-211ENST00000463372 ZFYVE9O95405 1425 aa21.69■■□□□ 1.06
C9orf3-211ENST00000463372 SENP3-EIF4A1A0A087X0R7 540 aa21.68■■□□□ 1.06
C9orf3-211ENST00000463372 KANK1Q14678 1352 aa21.68■■□□□ 1.06
C9orf3-211ENST00000463372 PIK3R4Q99570 1358 aa21.68■■□□□ 1.06
C9orf3-211ENST00000463372 SLC52A1Q9NWF4 448 aa21.67■■□□□ 1.06
C9orf3-211ENST00000463372 SPHKAPQ2M3C7 1700 aa21.66■■□□□ 1.06
C9orf3-211ENST00000463372 RIMS2Q9UQ26 1411 aa21.66■■□□□ 1.06
C9orf3-211ENST00000463372 DCAF8L1A6NGE4 600 aa21.64■■□□□ 1.05
C9orf3-211ENST00000463372 AMOTL2Q9Y2J4 779 aa21.64■■□□□ 1.05
C9orf3-211ENST00000463372 MARF1Q9Y4F3 1742 aaKnown RBP21.63■■□□□ 1.05
C9orf3-211ENST00000463372 BAG6P46379 1132 aa21.63■■□□□ 1.05
C9orf3-211ENST00000463372 GCC2Q8IWJ2 1684 aa21.62■■□□□ 1.05
C9orf3-211ENST00000463372 NOS1P29475 1434 aa21.62■■□□□ 1.05
C9orf3-211ENST00000463372 ADAMTS13Q76LX8 1427 aa21.61■■□□□ 1.05
C9orf3-211ENST00000463372 TRPM2O94759 1503 aa21.6■■□□□ 1.05
C9orf3-211ENST00000463372 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.6■■□□□ 1.05
C9orf3-211ENST00000463372 R3HDM1Q15032 1099 aaKnown RBP21.59■■□□□ 1.05
C9orf3-211ENST00000463372 ERBINQ96RT1 1412 aa21.59■■□□□ 1.05
C9orf3-211ENST00000463372 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.59■■□□□ 1.05
C9orf3-211ENST00000463372 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.04
C9orf3-211ENST00000463372 LMTK2Q8IWU2 1503 aa21.57■■□□□ 1.04
C9orf3-211ENST00000463372 LAMC1P11047 1609 aa21.56■■□□□ 1.04
C9orf3-211ENST00000463372 RALGAPBQ86X10 1494 aa21.56■■□□□ 1.04
C9orf3-211ENST00000463372 GLI3P10071 1580 aa21.56■■□□□ 1.04
C9orf3-211ENST00000463372 SOS2Q07890 1332 aaPredicted RBP21.55■■□□□ 1.04
C9orf3-211ENST00000463372 KIF15Q9NS87 1388 aa21.54■■□□□ 1.04
C9orf3-211ENST00000463372 TMEM131LA2VDJ0 1609 aa21.54■■□□□ 1.04
C9orf3-211ENST00000463372 PTPRUQ92729 1446 aa21.54■■□□□ 1.04
C9orf3-211ENST00000463372 SEPT12Q8IYM1 358 aa21.51■■□□□ 1.03
C9orf3-211ENST00000463372 XRN1Q8IZH2 1706 aaKnown RBP21.5■■□□□ 1.03
C9orf3-211ENST00000463372 UNC5CLQ8IV45 518 aa21.5■■□□□ 1.03
C9orf3-211ENST00000463372 RPRD2Q5VT52 1461 aaKnown RBP21.5■■□□□ 1.03
C9orf3-211ENST00000463372 KRT27Q7Z3Y8 459 aa21.49■■□□□ 1.03
C9orf3-211ENST00000463372 RRP7BPQ9NSQ0 103 aa21.49■■□□□ 1.03
C9orf3-211ENST00000463372 MYOM2P54296 1465 aa21.49■■□□□ 1.03
C9orf3-211ENST00000463372 ADGRL3Q9HAR2 1447 aa21.48■■□□□ 1.03
C9orf3-211ENST00000463372 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
C9orf3-211ENST00000463372 C1orf167Q5SNV9 1468 aa21.47■■□□□ 1.03
C9orf3-211ENST00000463372 NALCNQ8IZF0 1738 aa21.47■■□□□ 1.03
C9orf3-211ENST00000463372 EN1Q05925 392 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-211ENST00000463372 ZNF784Q8NCA9 323 aaPredicted RBP21.46■■□□□ 1.03
C9orf3-211ENST00000463372 C1QTNF8P60827 252 aa21.45■■□□□ 1.02
C9orf3-211ENST00000463372 RGPD1P0DJD0 1748 aa21.45■■□□□ 1.02
C9orf3-211ENST00000463372 PPP1R1BQ9UD71 204 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms