RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 SCAF11Q99590 1463 aaKnown RBP13.94□□□□□ -0.18
MSH5-211ENST00000463144 NOS1P29475 1434 aa13.94□□□□□ -0.18
MSH5-211ENST00000463144 CFAP70Q5T0N1 1121 aa13.93□□□□□ -0.18
MSH5-211ENST00000463144 SUPT16HQ9Y5B9 1047 aaKnown RBP13.93□□□□□ -0.18
MSH5-211ENST00000463144 NRXN1Q9ULB1 1477 aa13.93□□□□□ -0.18
MSH5-211ENST00000463144 PER1O15534 1290 aaPredicted RBP13.93□□□□□ -0.18
MSH5-211ENST00000463144 TMF1P82094 1093 aa13.93□□□□□ -0.18
MSH5-211ENST00000463144 SYNMO15061 1565 aa13.92□□□□□ -0.18
MSH5-211ENST00000463144 PPLO60437 1756 aa13.91□□□□□ -0.18
MSH5-211ENST00000463144 ZC3H13Q5T200 1668 aaKnown RBP13.91□□□□□ -0.18
MSH5-211ENST00000463144 CHGAP10645 457 aaKnown RBP13.91□□□□□ -0.18
MSH5-211ENST00000463144 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
MSH5-211ENST00000463144 PIK3C2BO00750 1634 aa13.91□□□□□ -0.18
MSH5-211ENST00000463144 ARHGAP31Q2M1Z3 1444 aa13.91□□□□□ -0.18
MSH5-211ENST00000463144 PANK3Q9H999 370 aa13.88□□□□□ -0.19
MSH5-211ENST00000463144 KTN1Q86UP2 1357 aaKnown RBP13.88□□□□□ -0.19
MSH5-211ENST00000463144 RALBP1Q15311 655 aa13.87□□□□□ -0.19
MSH5-211ENST00000463144 PIK3C2GO75747 1445 aa13.86□□□□□ -0.19
MSH5-211ENST00000463144 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
MSH5-211ENST00000463144 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
MSH5-211ENST00000463144 PNISRQ8TF01 805 aaKnown RBP13.86□□□□□ -0.19
MSH5-211ENST00000463144 REREQ9P2R6 1566 aa13.85□□□□□ -0.19
MSH5-211ENST00000463144 RPGRIP1LQ68CZ1 1315 aa13.85□□□□□ -0.19
MSH5-211ENST00000463144 IDI1Q13907 227 aa13.85□□□□□ -0.19
MSH5-211ENST00000463144 PREX1Q8TCU6 1659 aa13.85□□□□□ -0.19
MSH5-211ENST00000463144 SETBP1Q9Y6X0 1596 aa13.85□□□□□ -0.19
MSH5-211ENST00000463144 EIF3AQ14152 1382 aaKnown RBP13.84□□□□□ -0.19
MSH5-211ENST00000463144 C14orf93Q9H972 538 aaKnown RBP13.84□□□□□ -0.19
MSH5-211ENST00000463144 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
MSH5-211ENST00000463144 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
MSH5-211ENST00000463144 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
MSH5-211ENST00000463144 MYOM1P52179 1685 aa13.83□□□□□ -0.19
MSH5-211ENST00000463144 NEXMIFQ5QGS0 1516 aa13.83□□□□□ -0.2
MSH5-211ENST00000463144 AGLP35573 1532 aa13.83□□□□□ -0.2
MSH5-211ENST00000463144 FKBP8Q14318 412 aa13.83□□□□□ -0.2
MSH5-211ENST00000463144 MYO3AQ8NEV4 1616 aa13.83□□□□□ -0.2
MSH5-211ENST00000463144 ADGRB1O14514 1584 aa13.82□□□□□ -0.2
MSH5-211ENST00000463144 MYO5BQ9ULV0 1848 aa13.82□□□□□ -0.2
MSH5-211ENST00000463144 ERVK-7P63135 1459 aa13.82□□□□□ -0.2
MSH5-211ENST00000463144 CC2D1BQ5T0F9 858 aaKnown RBP13.81□□□□□ -0.2
MSH5-211ENST00000463144 CDCA8Q53HL2 280 aa13.81□□□□□ -0.2
MSH5-211ENST00000463144 NUTM2DQ5VT03 806 aaPredicted RBP13.81□□□□□ -0.2
MSH5-211ENST00000463144 FBXO31Q5XUX0 539 aaPredicted RBP13.81□□□□□ -0.2
MSH5-211ENST00000463144 SLC52A1Q9NWF4 448 aa13.81□□□□□ -0.2
MSH5-211ENST00000463144 LRPPRCP42704 1394 aaKnown RBP13.81□□□□□ -0.2
MSH5-211ENST00000463144 KDM5AP29375 1690 aaKnown RBP13.8□□□□□ -0.2
MSH5-211ENST00000463144 TMEM131LA2VDJ0 1609 aa13.8□□□□□ -0.2
MSH5-211ENST00000463144 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
MSH5-211ENST00000463144 NLRP13Q86W25 1043 aa13.79□□□□□ -0.2
MSH5-211ENST00000463144 CLTCQ00610 1675 aaKnown RBP13.78□□□□□ -0.2
MSH5-211ENST00000463144 VGFO15240 615 aaPredicted RBP13.78□□□□□ -0.2
MSH5-211ENST00000463144 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
MSH5-211ENST00000463144 SBNO2Q9Y2G9 1366 aa13.77□□□□□ -0.2
MSH5-211ENST00000463144 ARHGEF40Q8TER5 1519 aa13.77□□□□□ -0.2
MSH5-211ENST00000463144 ZFYVE9O95405 1425 aa13.76□□□□□ -0.21
MSH5-211ENST00000463144 AMER1Q5JTC6 1135 aaPredicted RBP13.76□□□□□ -0.21
MSH5-211ENST00000463144 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
MSH5-211ENST00000463144 CENPJQ9HC77 1338 aaPredicted RBP13.76□□□□□ -0.21
MSH5-211ENST00000463144 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
MSH5-211ENST00000463144 QRICH2Q9H0J4 1663 aa13.76□□□□□ -0.21
MSH5-211ENST00000463144 KNSTRNQ9Y448 316 aa13.75□□□□□ -0.21
MSH5-211ENST00000463144 SENP3-EIF4A1A0A087X0R7 540 aa13.75□□□□□ -0.21
MSH5-211ENST00000463144 BCANQ96GW7 911 aa13.75□□□□□ -0.21
MSH5-211ENST00000463144 NEFLP07196 543 aa13.74□□□□□ -0.21
MSH5-211ENST00000463144 MLECQ14165 292 aa13.74□□□□□ -0.21
MSH5-211ENST00000463144 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
MSH5-211ENST00000463144 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
MSH5-211ENST00000463144 SPATA31D1Q6ZQQ2 1576 aa13.72□□□□□ -0.21
MSH5-211ENST00000463144 CARD14Q9BXL6 1004 aa13.72□□□□□ -0.21
MSH5-211ENST00000463144 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.21
MSH5-211ENST00000463144 SENP3Q9H4L4 574 aaPredicted RBP13.71□□□□□ -0.21
MSH5-211ENST00000463144 PPP2R1AP30153 589 aa13.7□□□□□ -0.22
MSH5-211ENST00000463144 SMG6Q86US8 1419 aaKnown RBP13.7□□□□□ -0.22
MSH5-211ENST00000463144 IRX6P78412 446 aaPredicted RBP13.69□□□□□ -0.22
MSH5-211ENST00000463144 A2ML1A8K2U0 1454 aa13.68□□□□□ -0.22
MSH5-211ENST00000463144 TULP4Q9NRJ4 1543 aa13.67□□□□□ -0.22
MSH5-211ENST00000463144 NUDCQ9Y266 331 aa13.67□□□□□ -0.22
MSH5-211ENST00000463144 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
MSH5-211ENST00000463144 SLC12A5Q9H2X9 1139 aa13.66□□□□□ -0.22
MSH5-211ENST00000463144 ALKQ9UM73 1620 aa13.66□□□□□ -0.22
MSH5-211ENST00000463144 STK26Q9P289 416 aa13.66□□□□□ -0.22
MSH5-211ENST00000463144 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
MSH5-211ENST00000463144 INSRP06213 1382 aa13.66□□□□□ -0.22
MSH5-211ENST00000463144 BLMP54132 1417 aaPredicted RBP13.65□□□□□ -0.22
MSH5-211ENST00000463144 PTPRMP28827 1452 aa13.65□□□□□ -0.22
MSH5-211ENST00000463144 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
MSH5-211ENST00000463144 ADAMTS8Q9UP79 889 aa13.64□□□□□ -0.23
MSH5-211ENST00000463144 YTHDC2Q9H6S0 1430 aaKnown RBP13.63□□□□□ -0.23
MSH5-211ENST00000463144 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
MSH5-211ENST00000463144 SAFB2Q14151 953 aaKnown RBP eCLIP13.63□□□□□ -0.23
MSH5-211ENST00000463144 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
MSH5-211ENST00000463144 RIMS2Q9UQ26 1411 aa13.63□□□□□ -0.23
MSH5-211ENST00000463144 NSD3Q9BZ95 1437 aa13.62□□□□□ -0.23
MSH5-211ENST00000463144 SETD1AO15047 1707 aaKnown RBP13.62□□□□□ -0.23
MSH5-211ENST00000463144 ESF1Q9H501 851 aaKnown RBP13.61□□□□□ -0.23
MSH5-211ENST00000463144 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
MSH5-211ENST00000463144 PRAM1Q96QH2 718 aa13.6□□□□□ -0.23
MSH5-211ENST00000463144 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
MSH5-211ENST00000463144 USP32Q8NFA0 1604 aa13.59□□□□□ -0.23
MSH5-211ENST00000463144 ERICH6BQ5W0A0 696 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms