RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 SIN3AQ96ST3 1273 aa17.36■□□□□ 0.37
RAE1-207ENST00000462438 SLIT1O75093 1534 aa17.36■□□□□ 0.37
RAE1-207ENST00000462438 LAMC1P11047 1609 aa17.36■□□□□ 0.37
RAE1-207ENST00000462438 ARHGAP23Q9P227 1491 aa17.34■□□□□ 0.37
RAE1-207ENST00000462438 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
RAE1-207ENST00000462438 IDI1Q13907 227 aa17.31■□□□□ 0.36
RAE1-207ENST00000462438 TRPM1Q7Z4N2 1603 aa17.31■□□□□ 0.36
RAE1-207ENST00000462438 PPP1R15AO75807 674 aaPredicted RBP17.3■□□□□ 0.36
RAE1-207ENST00000462438 PRAG1Q86YV5 1406 aa17.29■□□□□ 0.36
RAE1-207ENST00000462438 RALGAPBQ86X10 1494 aa17.29■□□□□ 0.36
RAE1-207ENST00000462438 SETBP1Q9Y6X0 1596 aa17.28■□□□□ 0.36
RAE1-207ENST00000462438 L3MBTL2Q969R5 705 aa17.28■□□□□ 0.36
RAE1-207ENST00000462438 KDM4FA0A1W2PPD8 638 aa17.26■□□□□ 0.35
RAE1-207ENST00000462438 PIK3C2GO75747 1445 aa17.26■□□□□ 0.35
RAE1-207ENST00000462438 DIP2AQ14689 1571 aa17.25■□□□□ 0.35
RAE1-207ENST00000462438 SETD1AO15047 1707 aaKnown RBP17.25■□□□□ 0.35
RAE1-207ENST00000462438 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
RAE1-207ENST00000462438 TMEM2Q9UHN6 1383 aa17.24■□□□□ 0.35
RAE1-207ENST00000462438 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
RAE1-207ENST00000462438 POLR1AO95602 1720 aaPredicted RBP17.23■□□□□ 0.35
RAE1-207ENST00000462438 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.23■□□□□ 0.35
RAE1-207ENST00000462438 RIMS2Q9UQ26 1411 aa17.23■□□□□ 0.35
RAE1-207ENST00000462438 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
RAE1-207ENST00000462438 CEBPAP49715 358 aaPredicted RBP17.22■□□□□ 0.35
RAE1-207ENST00000462438 HDGFP51858 240 aaKnown RBP17.21■□□□□ 0.35
RAE1-207ENST00000462438 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.35
RAE1-207ENST00000462438 MED14O60244 1454 aa17.2■□□□□ 0.34
RAE1-207ENST00000462438 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
RAE1-207ENST00000462438 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
RAE1-207ENST00000462438 IQGAP1P46940 1657 aa17.19■□□□□ 0.34
RAE1-207ENST00000462438 PLEKHG1Q9ULL1 1385 aa17.18■□□□□ 0.34
RAE1-207ENST00000462438 SCAF11Q99590 1463 aaKnown RBP17.17■□□□□ 0.34
RAE1-207ENST00000462438 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
RAE1-207ENST00000462438 DCAF11Q8TEB1 546 aa17.17■□□□□ 0.34
RAE1-207ENST00000462438 ADGRB1O14514 1584 aa17.17■□□□□ 0.34
RAE1-207ENST00000462438 LMTK3Q96Q04 1460 aa17.15■□□□□ 0.34
RAE1-207ENST00000462438 ALKQ9UM73 1620 aa17.15■□□□□ 0.34
RAE1-207ENST00000462438 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
RAE1-207ENST00000462438 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
RAE1-207ENST00000462438 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
RAE1-207ENST00000462438 ZNF326Q5BKZ1 582 aaKnown RBP17.13■□□□□ 0.33
RAE1-207ENST00000462438 C14orf93Q9H972 538 aaKnown RBP17.12■□□□□ 0.33
RAE1-207ENST00000462438 DLC1Q96QB1 1528 aa17.12■□□□□ 0.33
RAE1-207ENST00000462438 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
RAE1-207ENST00000462438 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
RAE1-207ENST00000462438 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
RAE1-207ENST00000462438 CHGAP10645 457 aaKnown RBP17.1■□□□□ 0.33
RAE1-207ENST00000462438 ADAMTS13Q76LX8 1427 aa17.09■□□□□ 0.33
RAE1-207ENST00000462438 EID1Q9Y6B2 187 aa17.09■□□□□ 0.33
RAE1-207ENST00000462438 TECPR2O15040 1411 aa17.08■□□□□ 0.33
RAE1-207ENST00000462438 ANO8Q9HCE9 1232 aaPredicted RBP17.07■□□□□ 0.32
RAE1-207ENST00000462438 ARHGEF28Q8N1W1 1705 aaKnown RBP17.07■□□□□ 0.32
RAE1-207ENST00000462438 CPS1P31327 1500 aa17.07■□□□□ 0.32
RAE1-207ENST00000462438 NWD1Q149M9 1564 aa17.07■□□□□ 0.32
RAE1-207ENST00000462438 XRN1Q8IZH2 1706 aaKnown RBP17.06■□□□□ 0.32
RAE1-207ENST00000462438 ROCK2O75116 1388 aaKnown RBP17.06■□□□□ 0.32
RAE1-207ENST00000462438 STRCQ7RTU9 1775 aa17.05■□□□□ 0.32
RAE1-207ENST00000462438 ANKLE2Q86XL3 938 aa17.04■□□□□ 0.32
RAE1-207ENST00000462438 CHD2O14647 1828 aaKnown RBP17.04■□□□□ 0.32
RAE1-207ENST00000462438 KDM2AQ9Y2K7 1162 aa17.04■□□□□ 0.32
RAE1-207ENST00000462438 SBNO2Q9Y2G9 1366 aa17.04■□□□□ 0.32
RAE1-207ENST00000462438 NPHP4O75161 1426 aaPredicted RBP17.03■□□□□ 0.32
RAE1-207ENST00000462438 LTKP29376 864 aa17.03■□□□□ 0.32
RAE1-207ENST00000462438 SIRT1Q96EB6 747 aa17.03■□□□□ 0.32
RAE1-207ENST00000462438 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
RAE1-207ENST00000462438 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
RAE1-207ENST00000462438 TXNDC2Q86VQ3 553 aa17.02■□□□□ 0.32
RAE1-207ENST00000462438 LRPPRCP42704 1394 aaKnown RBP17.02■□□□□ 0.32
RAE1-207ENST00000462438 ABCC11Q96J66 1382 aa17.01■□□□□ 0.31
RAE1-207ENST00000462438 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
RAE1-207ENST00000462438 FAM135BQ49AJ0 1406 aa17.01■□□□□ 0.31
RAE1-207ENST00000462438 SLC24A1O60721 1099 aa17■□□□□ 0.31
RAE1-207ENST00000462438 USP47Q96K76 1375 aa17■□□□□ 0.31
RAE1-207ENST00000462438 YTHDC2Q9H6S0 1430 aaKnown RBP17■□□□□ 0.31
RAE1-207ENST00000462438 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
RAE1-207ENST00000462438 CFAP70Q5T0N1 1121 aa16.98■□□□□ 0.31
RAE1-207ENST00000462438 ADGRB2O60241 1585 aa16.98■□□□□ 0.31
RAE1-207ENST00000462438 QRICH2Q9H0J4 1663 aa16.97■□□□□ 0.31
RAE1-207ENST00000462438 EIF4G2P78344 907 aaKnown RBP eCLIP16.97■□□□□ 0.31
RAE1-207ENST00000462438 CARD11Q9BXL7 1154 aa16.97■□□□□ 0.31
RAE1-207ENST00000462438 NBPF1Q3BBV0 1214 aa16.96■□□□□ 0.31
RAE1-207ENST00000462438 NKTRP30414 1462 aaKnown RBP16.95■□□□□ 0.3
RAE1-207ENST00000462438 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
RAE1-207ENST00000462438 METP08581 1390 aa16.94■□□□□ 0.3
RAE1-207ENST00000462438 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
RAE1-207ENST00000462438 PTPRUQ92729 1446 aa16.92■□□□□ 0.3
RAE1-207ENST00000462438 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
RAE1-207ENST00000462438 NCOA3Q9Y6Q9 1424 aa16.91■□□□□ 0.3
RAE1-207ENST00000462438 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
RAE1-207ENST00000462438 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
RAE1-207ENST00000462438 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
RAE1-207ENST00000462438 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
RAE1-207ENST00000462438 TESK2Q96S53 571 aa16.87■□□□□ 0.29
RAE1-207ENST00000462438 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
RAE1-207ENST00000462438 CENPJQ9HC77 1338 aaPredicted RBP16.86■□□□□ 0.29
RAE1-207ENST00000462438 STRCP1A6NGW2 1772 aa16.85■□□□□ 0.29
RAE1-207ENST00000462438 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
RAE1-207ENST00000462438 KCNA6P17658 529 aa16.85■□□□□ 0.29
RAE1-207ENST00000462438 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.84■□□□□ 0.29
RAE1-207ENST00000462438 TULP4Q9NRJ4 1543 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms