RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 IQGAP3Q86VI3 1631 aa13.31□□□□□ -0.28
SYN3-207ENST00000462268 NAIPQ13075 1403 aa13.31□□□□□ -0.28
SYN3-207ENST00000462268 LTKP29376 864 aa13.31□□□□□ -0.28
SYN3-207ENST00000462268 POTEHQ6S545 545 aa13.31□□□□□ -0.28
SYN3-207ENST00000462268 KDM5AP29375 1690 aaKnown RBP13.31□□□□□ -0.28
SYN3-207ENST00000462268 IQGAP1P46940 1657 aa13.31□□□□□ -0.28
SYN3-207ENST00000462268 HFM1A2PYH4 1435 aa13.3□□□□□ -0.28
SYN3-207ENST00000462268 GCC2Q8IWJ2 1684 aa13.29□□□□□ -0.28
SYN3-207ENST00000462268 DSG3P32926 999 aa13.29□□□□□ -0.28
SYN3-207ENST00000462268 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.29
SYN3-207ENST00000462268 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
SYN3-207ENST00000462268 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
SYN3-207ENST00000462268 E9PCH4 1651 aa13.25□□□□□ -0.29
SYN3-207ENST00000462268 PPP1R15AO75807 674 aaPredicted RBP13.25□□□□□ -0.29
SYN3-207ENST00000462268 CAPN15O75808 1086 aa13.25□□□□□ -0.29
SYN3-207ENST00000462268 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
SYN3-207ENST00000462268 CFAP65Q6ZU64 1925 aaKnown RBP13.25□□□□□ -0.29
SYN3-207ENST00000462268 ZFYVE9O95405 1425 aa13.24□□□□□ -0.29
SYN3-207ENST00000462268 RIMS2Q9UQ26 1411 aa13.24□□□□□ -0.29
SYN3-207ENST00000462268 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
SYN3-207ENST00000462268 PLEKHG1Q9ULL1 1385 aa13.23□□□□□ -0.29
SYN3-207ENST00000462268 TOM1O60784 492 aa13.23□□□□□ -0.29
SYN3-207ENST00000462268 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
SYN3-207ENST00000462268 TMEM131LA2VDJ0 1609 aa13.22□□□□□ -0.29
SYN3-207ENST00000462268 BCANQ96GW7 911 aa13.22□□□□□ -0.29
SYN3-207ENST00000462268 LRRC7Q96NW7 1537 aa13.21□□□□□ -0.29
SYN3-207ENST00000462268 SLC26A8Q96RN1 970 aa13.2□□□□□ -0.3
SYN3-207ENST00000462268 TRPM2O94759 1503 aa13.19□□□□□ -0.3
SYN3-207ENST00000462268 ACIN1Q9UKV3 1341 aaKnown RBP13.19□□□□□ -0.3
SYN3-207ENST00000462268 KCNA6P17658 529 aa13.19□□□□□ -0.3
SYN3-207ENST00000462268 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
SYN3-207ENST00000462268 NKTRP30414 1462 aaKnown RBP13.17□□□□□ -0.3
SYN3-207ENST00000462268 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
SYN3-207ENST00000462268 ZNF326Q5BKZ1 582 aaKnown RBP13.16□□□□□ -0.3
SYN3-207ENST00000462268 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
SYN3-207ENST00000462268 SPHKAPQ2M3C7 1700 aa13.16□□□□□ -0.3
SYN3-207ENST00000462268 TMEM94Q12767 1356 aa13.15□□□□□ -0.3
SYN3-207ENST00000462268 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
SYN3-207ENST00000462268 NWD1Q149M9 1564 aa13.15□□□□□ -0.3
SYN3-207ENST00000462268 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
SYN3-207ENST00000462268 PIK3R4Q99570 1358 aa13.14□□□□□ -0.31
SYN3-207ENST00000462268 ADAMTS13Q76LX8 1427 aa13.13□□□□□ -0.31
SYN3-207ENST00000462268 STRCP1A6NGW2 1772 aa13.13□□□□□ -0.31
SYN3-207ENST00000462268 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
SYN3-207ENST00000462268 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
SYN3-207ENST00000462268 SETD5Q9C0A6 1442 aa13.13□□□□□ -0.31
SYN3-207ENST00000462268 MPHOSPH9Q99550 1183 aa13.11□□□□□ -0.31
SYN3-207ENST00000462268 ALKQ9UM73 1620 aa13.1□□□□□ -0.31
SYN3-207ENST00000462268 MSH6P52701 1360 aa13.1□□□□□ -0.31
SYN3-207ENST00000462268 CCDC144AA2RUR9 1427 aa13.1□□□□□ -0.31
SYN3-207ENST00000462268 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
SYN3-207ENST00000462268 HSPA1LP34931 641 aa13.09□□□□□ -0.31
SYN3-207ENST00000462268 NCOA3Q9Y6Q9 1424 aa13.09□□□□□ -0.31
SYN3-207ENST00000462268 SETBP1Q9Y6X0 1596 aa13.09□□□□□ -0.31
SYN3-207ENST00000462268 RPGRIP1LQ68CZ1 1315 aa13.09□□□□□ -0.31
SYN3-207ENST00000462268 NEXMIFQ5QGS0 1516 aa13.08□□□□□ -0.31
SYN3-207ENST00000462268 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
SYN3-207ENST00000462268 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
SYN3-207ENST00000462268 RBM33Q96EV2 1170 aaKnown RBP13.06□□□□□ -0.32
SYN3-207ENST00000462268 AMOTL2Q9Y2J4 779 aa13.06□□□□□ -0.32
SYN3-207ENST00000462268 DISP3Q9P2K9 1392 aa13.06□□□□□ -0.32
SYN3-207ENST00000462268 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
SYN3-207ENST00000462268 C14orf37Q86TY3 774 aa13.05□□□□□ -0.32
SYN3-207ENST00000462268 METP08581 1390 aa13.04□□□□□ -0.32
SYN3-207ENST00000462268 PTPRUQ92729 1446 aa13.04□□□□□ -0.32
SYN3-207ENST00000462268 NRXN3Q9Y4C0 1643 aa13.03□□□□□ -0.32
SYN3-207ENST00000462268 KIF1BO60333 1816 aa13.02□□□□□ -0.32
SYN3-207ENST00000462268 HRCP23327 699 aa13.02□□□□□ -0.33
SYN3-207ENST00000462268 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.33
SYN3-207ENST00000462268 ANKRD30BQ9BXX2 1392 aa13.02□□□□□ -0.33
SYN3-207ENST00000462268 SPATA31E1Q6ZUB1 1445 aa13.02□□□□□ -0.33
SYN3-207ENST00000462268 CHD2O14647 1828 aaKnown RBP13.02□□□□□ -0.33
SYN3-207ENST00000462268 ATF3P18847 181 aa13.01□□□□□ -0.33
SYN3-207ENST00000462268 C19orf44Q9H6X5 657 aa13.01□□□□□ -0.33
SYN3-207ENST00000462268 DCCP43146 1447 aa13.01□□□□□ -0.33
SYN3-207ENST00000462268 XIRP1Q702N8 1843 aaKnown RBP13.01□□□□□ -0.33
SYN3-207ENST00000462268 SLAIN2Q9P270 581 aa13□□□□□ -0.33
SYN3-207ENST00000462268 XRN1Q8IZH2 1706 aaKnown RBP12.99□□□□□ -0.33
SYN3-207ENST00000462268 PTCH1Q13635 1447 aa12.99□□□□□ -0.33
SYN3-207ENST00000462268 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
SYN3-207ENST00000462268 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
SYN3-207ENST00000462268 PRAG1Q86YV5 1406 aa12.98□□□□□ -0.33
SYN3-207ENST00000462268 ADGRL3Q9HAR2 1447 aa12.96□□□□□ -0.33
SYN3-207ENST00000462268 ADGRF5Q8IZF2 1346 aa12.96□□□□□ -0.33
SYN3-207ENST00000462268 MED1Q15648 1581 aaPredicted RBP12.95□□□□□ -0.34
SYN3-207ENST00000462268 ROBO1Q9Y6N7 1651 aa12.95□□□□□ -0.34
SYN3-207ENST00000462268 PIK3C2GO75747 1445 aa12.95□□□□□ -0.34
SYN3-207ENST00000462268 PPLO60437 1756 aa12.94□□□□□ -0.34
SYN3-207ENST00000462268 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
SYN3-207ENST00000462268 MYOM2P54296 1465 aa12.93□□□□□ -0.34
SYN3-207ENST00000462268 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.92□□□□□ -0.34
SYN3-207ENST00000462268 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
SYN3-207ENST00000462268 LRPPRCP42704 1394 aaKnown RBP12.92□□□□□ -0.34
SYN3-207ENST00000462268 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
SYN3-207ENST00000462268 TECPR2O15040 1411 aa12.91□□□□□ -0.34
SYN3-207ENST00000462268 MST1RQ04912 1400 aa12.91□□□□□ -0.34
SYN3-207ENST00000462268 BRINP3Q76B58 766 aa12.91□□□□□ -0.34
SYN3-207ENST00000462268 JCADQ9P266 1359 aa12.91□□□□□ -0.34
SYN3-207ENST00000462268 NRXN1Q9ULB1 1477 aa12.91□□□□□ -0.34
SYN3-207ENST00000462268 ABCB7O75027 752 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms