RNA–Protein interactions for RNA: ENST00000461903.1

HLA-A-205, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-205ENST00000461903 ZNF326Q5BKZ1 582 aaKnown RBP32.53■■■□□ 2.8
HLA-A-205ENST00000461903 ZNF335Q9H4Z2 1342 aaPredicted RBP32.52■■■□□ 2.8
HLA-A-205ENST00000461903 SIN3AQ96ST3 1273 aa32.52■■■□□ 2.8
HLA-A-205ENST00000461903 SPATA31E1Q6ZUB1 1445 aa32.51■■■□□ 2.8
HLA-A-205ENST00000461903 NEUROD1Q13562 356 aa32.5■■■□□ 2.79
HLA-A-205ENST00000461903 TMEM2Q9UHN6 1383 aa32.48■■■□□ 2.79
HLA-A-205ENST00000461903 SLIT1O75093 1534 aa32.48■■■□□ 2.79
HLA-A-205ENST00000461903 RGL3Q3MIN7 710 aa32.46■■■□□ 2.79
HLA-A-205ENST00000461903 ARHGAP23Q9P227 1491 aa32.45■■■□□ 2.79
HLA-A-205ENST00000461903 RIMS2Q9UQ26 1411 aa32.45■■■□□ 2.78
HLA-A-205ENST00000461903 NEXMIFQ5QGS0 1516 aa32.42■■■□□ 2.78
HLA-A-205ENST00000461903 POLR1AO95602 1720 aaPredicted RBP32.42■■■□□ 2.78
HLA-A-205ENST00000461903 RPGRIP1LQ68CZ1 1315 aa32.42■■■□□ 2.78
HLA-A-205ENST00000461903 PPLO60437 1756 aa32.41■■■□□ 2.78
HLA-A-205ENST00000461903 HDGFP51858 240 aaKnown RBP32.41■■■□□ 2.78
HLA-A-205ENST00000461903 EID1Q9Y6B2 187 aa32.41■■■□□ 2.78
HLA-A-205ENST00000461903 ZFYVE9O95405 1425 aa32.41■■■□□ 2.78
HLA-A-205ENST00000461903 UBAP1LF5GYI3 381 aa32.4■■■□□ 2.78
HLA-A-205ENST00000461903 IFT172Q9UG01 1749 aa32.39■■■□□ 2.78
HLA-A-205ENST00000461903 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.39■■■□□ 2.78
HLA-A-205ENST00000461903 SCAF11Q99590 1463 aaKnown RBP32.38■■■□□ 2.77
HLA-A-205ENST00000461903 PPP1R15AO75807 674 aaPredicted RBP32.38■■■□□ 2.77
HLA-A-205ENST00000461903 ANKLE2Q86XL3 938 aa32.38■■■□□ 2.77
HLA-A-205ENST00000461903 TONSLQ96HA7 1378 aa32.36■■■□□ 2.77
HLA-A-205ENST00000461903 TXNDC2Q86VQ3 553 aa32.36■■■□□ 2.77
HLA-A-205ENST00000461903 NUTM2DQ5VT03 806 aaPredicted RBP32.33■■■□□ 2.77
HLA-A-205ENST00000461903 LTKP29376 864 aa32.32■■■□□ 2.76
HLA-A-205ENST00000461903 VGFO15240 615 aaPredicted RBP32.3■■■□□ 2.76
HLA-A-205ENST00000461903 DCAF11Q8TEB1 546 aa32.3■■■□□ 2.76
HLA-A-205ENST00000461903 MYOM2P54296 1465 aa32.29■■■□□ 2.76
HLA-A-205ENST00000461903 L3MBTL2Q969R5 705 aa32.27■■■□□ 2.76
HLA-A-205ENST00000461903 CPS1P31327 1500 aa32.27■■■□□ 2.76
HLA-A-205ENST00000461903 NPHP4O75161 1426 aaPredicted RBP32.26■■■□□ 2.75
HLA-A-205ENST00000461903 IQGAP1P46940 1657 aa32.26■■■□□ 2.75
HLA-A-205ENST00000461903 MED14O60244 1454 aa32.25■■■□□ 2.75
HLA-A-205ENST00000461903 PLEKHG1Q9ULL1 1385 aa32.25■■■□□ 2.75
HLA-A-205ENST00000461903 BCANQ96GW7 911 aa32.25■■■□□ 2.75
HLA-A-205ENST00000461903 KDM2AQ9Y2K7 1162 aa32.25■■■□□ 2.75
HLA-A-205ENST00000461903 STAC3Q96MF2 364 aa32.24■■■□□ 2.75
HLA-A-205ENST00000461903 ADGRF5Q8IZF2 1346 aa32.2■■■□□ 2.75
HLA-A-205ENST00000461903 SENP3Q9H4L4 574 aaPredicted RBP32.19■■■□□ 2.74
HLA-A-205ENST00000461903 TIMELESSQ9UNS1 1208 aa32.19■■■□□ 2.74
HLA-A-205ENST00000461903 SETBP1Q9Y6X0 1596 aa32.19■■■□□ 2.74
HLA-A-205ENST00000461903 NRXN1Q9ULB1 1477 aa32.17■■■□□ 2.74
HLA-A-205ENST00000461903 PIK3C2GO75747 1445 aa32.17■■■□□ 2.74
HLA-A-205ENST00000461903 NRXN3Q9Y4C0 1643 aa32.15■■■□□ 2.74
HLA-A-205ENST00000461903 DIP2AQ14689 1571 aa32.15■■■□□ 2.74
HLA-A-205ENST00000461903 LAMC1P11047 1609 aa32.12■■■□□ 2.73
HLA-A-205ENST00000461903 TOM1O60784 492 aa32.12■■■□□ 2.73
HLA-A-205ENST00000461903 PRAG1Q86YV5 1406 aa32.11■■■□□ 2.73
HLA-A-205ENST00000461903 ADAMTS13Q76LX8 1427 aa32.1■■■□□ 2.73
HLA-A-205ENST00000461903 HSPA1LP34931 641 aa32.09■■■□□ 2.73
HLA-A-205ENST00000461903 ALKQ9UM73 1620 aa32.09■■■□□ 2.73
HLA-A-205ENST00000461903 SLC26A8Q96RN1 970 aa32.08■■■□□ 2.73
HLA-A-205ENST00000461903 MED1Q15648 1581 aaPredicted RBP32.08■■■□□ 2.73
HLA-A-205ENST00000461903 SCAF1Q9H7N4 1312 aaKnown RBP32.08■■■□□ 2.73
HLA-A-205ENST00000461903 PIP4K2BP78356 416 aa32.07■■■□□ 2.72
HLA-A-205ENST00000461903 SETD1AO15047 1707 aaKnown RBP32.05■■■□□ 2.72
HLA-A-205ENST00000461903 TBX22Q9Y458 520 aa32.04■■■□□ 2.72
HLA-A-205ENST00000461903 KIAA1210Q9ULL0 1709 aa32.03■■■□□ 2.72
HLA-A-205ENST00000461903 CFAP70Q5T0N1 1121 aa32.01■■■□□ 2.71
HLA-A-205ENST00000461903 C14orf93Q9H972 538 aaKnown RBP32■■■□□ 2.71
HLA-A-205ENST00000461903 TRPM1Q7Z4N2 1603 aa32■■■□□ 2.71
HLA-A-205ENST00000461903 PIK3R4Q99570 1358 aa31.97■■■□□ 2.71
HLA-A-205ENST00000461903 NBPF8Q3BBV2 869 aa31.96■■■□□ 2.71
HLA-A-205ENST00000461903 METP08581 1390 aa31.96■■■□□ 2.71
HLA-A-205ENST00000461903 ASXL1Q8IXJ9 1541 aa31.95■■■□□ 2.7
HLA-A-205ENST00000461903 STRCP1A6NGW2 1772 aa31.93■■■□□ 2.7
HLA-A-205ENST00000461903 RALGAPBQ86X10 1494 aa31.93■■■□□ 2.7
HLA-A-205ENST00000461903 CHD2O14647 1828 aaKnown RBP31.92■■■□□ 2.7
HLA-A-205ENST00000461903 ADGRB1O14514 1584 aa31.91■■■□□ 2.7
HLA-A-205ENST00000461903 LRRC7Q96NW7 1537 aa31.91■■■□□ 2.7
HLA-A-205ENST00000461903 ROCK2O75116 1388 aaKnown RBP31.91■■■□□ 2.7
HLA-A-205ENST00000461903 NWD1Q149M9 1564 aa31.9■■■□□ 2.7
HLA-A-205ENST00000461903 TMEM132EQ6IEE7 984 aa31.9■■■□□ 2.7
HLA-A-205ENST00000461903 XRN1Q8IZH2 1706 aaKnown RBP31.87■■■□□ 2.69
HLA-A-205ENST00000461903 PTPRUQ92729 1446 aa31.87■■■□□ 2.69
HLA-A-205ENST00000461903 KCNA6P17658 529 aa31.86■■■□□ 2.69
HLA-A-205ENST00000461903 ZEB1P37275 1124 aaPredicted RBP31.86■■■□□ 2.69
HLA-A-205ENST00000461903 NBPF1Q3BBV0 1214 aa31.86■■■□□ 2.69
HLA-A-205ENST00000461903 YTHDC2Q9H6S0 1430 aaKnown RBP31.86■■■□□ 2.69
HLA-A-205ENST00000461903 KNDC1Q76NI1 1749 aa31.85■■■□□ 2.69
HLA-A-205ENST00000461903 LRPPRCP42704 1394 aaKnown RBP31.85■■■□□ 2.69
HLA-A-205ENST00000461903 AMOTL2Q9Y2J4 779 aa31.84■■■□□ 2.69
HLA-A-205ENST00000461903 NKTRP30414 1462 aaKnown RBP31.83■■■□□ 2.69
HLA-A-205ENST00000461903 STK26Q9P289 416 aa31.82■■■□□ 2.69
HLA-A-205ENST00000461903 GPRASP1Q5JY77 1395 aa31.81■■■□□ 2.68
HLA-A-205ENST00000461903 CARD11Q9BXL7 1154 aa31.79■■■□□ 2.68
HLA-A-205ENST00000461903 TECPR2O15040 1411 aa31.78■■■□□ 2.68
HLA-A-205ENST00000461903 ABCC11Q96J66 1382 aa31.78■■■□□ 2.68
HLA-A-205ENST00000461903 PTCH1Q13635 1447 aa31.78■■■□□ 2.68
HLA-A-205ENST00000461903 PHF23Q9BUL5 403 aaPredicted RBP31.77■■■□□ 2.68
HLA-A-205ENST00000461903 TRAK1Q9UPV9 953 aa31.76■■■□□ 2.67
HLA-A-205ENST00000461903 DLC1Q96QB1 1528 aa31.75■■■□□ 2.67
HLA-A-205ENST00000461903 ARHGEF28Q8N1W1 1705 aaKnown RBP31.74■■■□□ 2.67
HLA-A-205ENST00000461903 EIF3AQ14152 1382 aaKnown RBP31.71■■■□□ 2.67
HLA-A-205ENST00000461903 ROBO2Q9HCK4 1378 aa31.71■■■□□ 2.67
HLA-A-205ENST00000461903 PROSER2Q86WR7 435 aaPredicted RBP31.7■■■□□ 2.67
HLA-A-205ENST00000461903 FAM135BQ49AJ0 1406 aa31.68■■■□□ 2.66
HLA-A-205ENST00000461903 XIRP1Q702N8 1843 aaKnown RBP31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms