RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 GCC2Q8IWJ2 1684 aa22.34■■□□□ 1.17
ATG4B-213ENST00000460211 TMEM2Q9UHN6 1383 aa22.34■■□□□ 1.17
ATG4B-213ENST00000460211 RGS17Q9UGC6 210 aaPredicted RBP22.32■■□□□ 1.16
ATG4B-213ENST00000460211 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
ATG4B-213ENST00000460211 RBM33Q96EV2 1170 aaKnown RBP22.3■■□□□ 1.16
ATG4B-213ENST00000460211 TMEM94Q12767 1356 aa22.29■■□□□ 1.16
ATG4B-213ENST00000460211 CHGAP10645 457 aaKnown RBP22.29■■□□□ 1.16
ATG4B-213ENST00000460211 HDGFP51858 240 aaKnown RBP22.29■■□□□ 1.16
ATG4B-213ENST00000460211 SLC26A8Q96RN1 970 aa22.29■■□□□ 1.16
ATG4B-213ENST00000460211 SLC4A1APQ9BWU0 796 aaKnown RBP22.28■■□□□ 1.16
ATG4B-213ENST00000460211 E9PCH4 1651 aa22.27■■□□□ 1.16
ATG4B-213ENST00000460211 KDM5AP29375 1690 aaKnown RBP22.26■■□□□ 1.15
ATG4B-213ENST00000460211 FAM135BQ49AJ0 1406 aa22.25■■□□□ 1.15
ATG4B-213ENST00000460211 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
ATG4B-213ENST00000460211 ROBO1Q9Y6N7 1651 aa22.25■■□□□ 1.15
ATG4B-213ENST00000460211 KCNA6P17658 529 aa22.24■■□□□ 1.15
ATG4B-213ENST00000460211 ADGRB3O60242 1522 aa22.23■■□□□ 1.15
ATG4B-213ENST00000460211 BCANQ96GW7 911 aa22.23■■□□□ 1.15
ATG4B-213ENST00000460211 SETD5Q9C0A6 1442 aa22.23■■□□□ 1.15
ATG4B-213ENST00000460211 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.21■■□□□ 1.15
ATG4B-213ENST00000460211 PPP1R15AO75807 674 aaPredicted RBP22.2■■□□□ 1.14
ATG4B-213ENST00000460211 POTEAQ6S8J7 498 aa22.19■■□□□ 1.14
ATG4B-213ENST00000460211 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
ATG4B-213ENST00000460211 NWD1Q149M9 1564 aa22.16■■□□□ 1.14
ATG4B-213ENST00000460211 MYO5BQ9ULV0 1848 aa22.16■■□□□ 1.14
ATG4B-213ENST00000460211 NKTRP30414 1462 aaKnown RBP22.15■■□□□ 1.14
ATG4B-213ENST00000460211 RIMS2Q9UQ26 1411 aa22.15■■□□□ 1.14
ATG4B-213ENST00000460211 MSH6P52701 1360 aa22.14■■□□□ 1.14
ATG4B-213ENST00000460211 TMEM131LA2VDJ0 1609 aa22.14■■□□□ 1.14
ATG4B-213ENST00000460211 ZNF326Q5BKZ1 582 aaKnown RBP22.14■■□□□ 1.13
ATG4B-213ENST00000460211 PHLPP1O60346 1717 aa22.14■■□□□ 1.13
ATG4B-213ENST00000460211 SPHKAPQ2M3C7 1700 aa22.13■■□□□ 1.13
ATG4B-213ENST00000460211 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
ATG4B-213ENST00000460211 SLAIN2Q9P270 581 aa22.11■■□□□ 1.13
ATG4B-213ENST00000460211 ZFYVE9O95405 1425 aa22.11■■□□□ 1.13
ATG4B-213ENST00000460211 TRPM2O94759 1503 aa22.11■■□□□ 1.13
ATG4B-213ENST00000460211 HRCP23327 699 aa22.1■■□□□ 1.13
ATG4B-213ENST00000460211 CHD2O14647 1828 aaKnown RBP22.1■■□□□ 1.13
ATG4B-213ENST00000460211 PLEKHG1Q9ULL1 1385 aa22.1■■□□□ 1.13
ATG4B-213ENST00000460211 FOXD1Q16676 465 aa22.09■■□□□ 1.13
ATG4B-213ENST00000460211 SETD1AO15047 1707 aaKnown RBP22.09■■□□□ 1.13
ATG4B-213ENST00000460211 NUTM2DQ5VT03 806 aaPredicted RBP22.08■■□□□ 1.13
ATG4B-213ENST00000460211 JCADQ9P266 1359 aa22.04■■□□□ 1.12
ATG4B-213ENST00000460211 C14orf37Q86TY3 774 aa22.04■■□□□ 1.12
ATG4B-213ENST00000460211 TBX22Q9Y458 520 aa22.04■■□□□ 1.12
ATG4B-213ENST00000460211 CLTCL1P53675 1640 aa22.03■■□□□ 1.12
ATG4B-213ENST00000460211 CCDC144AA2RUR9 1427 aa22.03■■□□□ 1.12
ATG4B-213ENST00000460211 COL16A1Q07092 1604 aaPredicted RBP22.02■■□□□ 1.12
ATG4B-213ENST00000460211 RPGRIP1LQ68CZ1 1315 aa22.01■■□□□ 1.11
ATG4B-213ENST00000460211 VGFO15240 615 aaPredicted RBP22■■□□□ 1.11
ATG4B-213ENST00000460211 KIF1BO60333 1816 aa21.99■■□□□ 1.11
ATG4B-213ENST00000460211 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.97■■□□□ 1.11
ATG4B-213ENST00000460211 LRP6O75581 1613 aa21.97■■□□□ 1.11
ATG4B-213ENST00000460211 ADAMTS13Q76LX8 1427 aa21.97■■□□□ 1.11
ATG4B-213ENST00000460211 MEX3CQ5U5Q3 659 aaKnown RBP21.96■■□□□ 1.11
ATG4B-213ENST00000460211 PIK3R4Q99570 1358 aa21.95■■□□□ 1.1
ATG4B-213ENST00000460211 RGL3Q3MIN7 710 aa21.94■■□□□ 1.1
ATG4B-213ENST00000460211 NCOA3Q9Y6Q9 1424 aa21.94■■□□□ 1.1
ATG4B-213ENST00000460211 ATF3P18847 181 aa21.93■■□□□ 1.1
ATG4B-213ENST00000460211 DIP2AQ14689 1571 aa21.93■■□□□ 1.1
ATG4B-213ENST00000460211 CADPS2Q86UW7 1296 aa21.92■■□□□ 1.1
ATG4B-213ENST00000460211 C19orf44Q9H6X5 657 aa21.92■■□□□ 1.1
ATG4B-213ENST00000460211 NEXMIFQ5QGS0 1516 aa21.91■■□□□ 1.1
ATG4B-213ENST00000460211 SPATA31A6Q5VVP1 1343 aa21.91■■□□□ 1.1
ATG4B-213ENST00000460211 AHDC1Q5TGY3 1603 aaPredicted RBP21.91■■□□□ 1.1
ATG4B-213ENST00000460211 SHPRHQ149N8 1683 aa21.9■■□□□ 1.1
ATG4B-213ENST00000460211 AMOTL2Q9Y2J4 779 aa21.89■■□□□ 1.09
ATG4B-213ENST00000460211 PTPRUQ92729 1446 aa21.89■■□□□ 1.09
ATG4B-213ENST00000460211 ANKRD30BQ9BXX2 1392 aa21.87■■□□□ 1.09
ATG4B-213ENST00000460211 SETBP1Q9Y6X0 1596 aa21.87■■□□□ 1.09
ATG4B-213ENST00000460211 NUTM2BA6NNL0 878 aaPredicted RBP21.87■■□□□ 1.09
ATG4B-213ENST00000460211 NUTM2EB1AL46 878 aaPredicted RBP21.87■■□□□ 1.09
ATG4B-213ENST00000460211 ZNF772Q68DY9 489 aaPredicted RBP21.87■■□□□ 1.09
ATG4B-213ENST00000460211 NUTM2AQ8IVF1 878 aaPredicted RBP21.87■■□□□ 1.09
ATG4B-213ENST00000460211 SPATA31E1Q6ZUB1 1445 aa21.87■■□□□ 1.09
ATG4B-213ENST00000460211 BRINP3Q76B58 766 aa21.86■■□□□ 1.09
ATG4B-213ENST00000460211 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
ATG4B-213ENST00000460211 UPF1Q92900 1129 aaKnown RBP eCLIP21.83■■□□□ 1.09
ATG4B-213ENST00000460211 METP08581 1390 aa21.82■■□□□ 1.08
ATG4B-213ENST00000460211 NRXN3Q9Y4C0 1643 aa21.81■■□□□ 1.08
ATG4B-213ENST00000460211 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
ATG4B-213ENST00000460211 XRN1Q8IZH2 1706 aaKnown RBP21.8■■□□□ 1.08
ATG4B-213ENST00000460211 ADGRF5Q8IZF2 1346 aa21.8■■□□□ 1.08
ATG4B-213ENST00000460211 RXRBP28702 533 aa21.79■■□□□ 1.08
ATG4B-213ENST00000460211 PPLO60437 1756 aa21.78■■□□□ 1.08
ATG4B-213ENST00000460211 DCCP43146 1447 aa21.78■■□□□ 1.08
ATG4B-213ENST00000460211 MST1RQ04912 1400 aa21.77■■□□□ 1.08
ATG4B-213ENST00000460211 AFF2P51816 1311 aa21.77■■□□□ 1.07
ATG4B-213ENST00000460211 DDX17Q92841 729 aaKnown RBP21.76■■□□□ 1.07
ATG4B-213ENST00000460211 NHSL1Q5SYE7 1610 aa21.76■■□□□ 1.07
ATG4B-213ENST00000460211 STAC3Q96MF2 364 aa21.75■■□□□ 1.07
ATG4B-213ENST00000460211 NALCNQ8IZF0 1738 aa21.72■■□□□ 1.07
ATG4B-213ENST00000460211 DCAF11Q8TEB1 546 aa21.71■■□□□ 1.07
ATG4B-213ENST00000460211 LRRC59Q96AG4 307 aaKnown RBP21.71■■□□□ 1.07
ATG4B-213ENST00000460211 C8orf37Q96NL8 207 aa21.71■■□□□ 1.07
ATG4B-213ENST00000460211 KDM2AQ9Y2K7 1162 aa21.7■■□□□ 1.06
ATG4B-213ENST00000460211 PIK3C2GO75747 1445 aa21.7■■□□□ 1.06
ATG4B-213ENST00000460211 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
ATG4B-213ENST00000460211 C14orf93Q9H972 538 aaKnown RBP21.69■■□□□ 1.06
ATG4B-213ENST00000460211 MYOM2P54296 1465 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms