RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 STAG3Q9UJ98 1225 aa18.95■□□□□ 0.62
COL18A1-206ENST00000459895 NCKAP5LQ9HCH0 1330 aa18.95■□□□□ 0.62
COL18A1-206ENST00000459895 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
COL18A1-206ENST00000459895 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
COL18A1-206ENST00000459895 SETD1AO15047 1707 aaKnown RBP18.93■□□□□ 0.62
COL18A1-206ENST00000459895 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
COL18A1-206ENST00000459895 SETBP1Q9Y6X0 1596 aa18.92■□□□□ 0.62
COL18A1-206ENST00000459895 STRCP1A6NGW2 1772 aa18.91■□□□□ 0.62
COL18A1-206ENST00000459895 LTKP29376 864 aa18.89■□□□□ 0.61
COL18A1-206ENST00000459895 NWD1Q149M9 1564 aa18.88■□□□□ 0.61
COL18A1-206ENST00000459895 ANKLE2Q86XL3 938 aa18.87■□□□□ 0.61
COL18A1-206ENST00000459895 PLEKHG1Q9ULL1 1385 aa18.87■□□□□ 0.61
COL18A1-206ENST00000459895 LTBP4Q8N2S1 1624 aa18.86■□□□□ 0.61
COL18A1-206ENST00000459895 MYOM2P54296 1465 aa18.86■□□□□ 0.61
COL18A1-206ENST00000459895 TXNDC2Q86VQ3 553 aa18.84■□□□□ 0.61
COL18A1-206ENST00000459895 LAMC1P11047 1609 aa18.84■□□□□ 0.61
COL18A1-206ENST00000459895 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.61
COL18A1-206ENST00000459895 ZNF326Q5BKZ1 582 aaKnown RBP18.83■□□□□ 0.6
COL18A1-206ENST00000459895 NUTM2DQ5VT03 806 aaPredicted RBP18.83■□□□□ 0.6
COL18A1-206ENST00000459895 EID1Q9Y6B2 187 aa18.83■□□□□ 0.6
COL18A1-206ENST00000459895 XRN1Q8IZH2 1706 aaKnown RBP18.83■□□□□ 0.6
COL18A1-206ENST00000459895 PPP1R15AO75807 674 aaPredicted RBP18.81■□□□□ 0.6
COL18A1-206ENST00000459895 NRXN1Q9ULB1 1477 aa18.81■□□□□ 0.6
COL18A1-206ENST00000459895 CHD2O14647 1828 aaKnown RBP18.81■□□□□ 0.6
COL18A1-206ENST00000459895 ASXL1Q8IXJ9 1541 aa18.8■□□□□ 0.6
COL18A1-206ENST00000459895 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-206ENST00000459895 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
COL18A1-206ENST00000459895 PIK3C2GO75747 1445 aa18.79■□□□□ 0.6
COL18A1-206ENST00000459895 ALKQ9UM73 1620 aa18.78■□□□□ 0.6
COL18A1-206ENST00000459895 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
COL18A1-206ENST00000459895 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.78■□□□□ 0.6
COL18A1-206ENST00000459895 XIRP1Q702N8 1843 aaKnown RBP18.78■□□□□ 0.6
COL18A1-206ENST00000459895 CPS1P31327 1500 aa18.77■□□□□ 0.6
COL18A1-206ENST00000459895 RPGRIP1LQ68CZ1 1315 aa18.75■□□□□ 0.59
COL18A1-206ENST00000459895 KNDC1Q76NI1 1749 aa18.75■□□□□ 0.59
COL18A1-206ENST00000459895 RGL3Q3MIN7 710 aa18.75■□□□□ 0.59
COL18A1-206ENST00000459895 NKTRP30414 1462 aaKnown RBP18.75■□□□□ 0.59
COL18A1-206ENST00000459895 SLC26A8Q96RN1 970 aa18.72■□□□□ 0.59
COL18A1-206ENST00000459895 ADGRF5Q8IZF2 1346 aa18.72■□□□□ 0.59
COL18A1-206ENST00000459895 HDGFP51858 240 aaKnown RBP18.71■□□□□ 0.59
COL18A1-206ENST00000459895 PTPRUQ92729 1446 aa18.71■□□□□ 0.59
COL18A1-206ENST00000459895 KIAA1210Q9ULL0 1709 aa18.71■□□□□ 0.59
COL18A1-206ENST00000459895 SIN3AQ96ST3 1273 aa18.7■□□□□ 0.58
COL18A1-206ENST00000459895 LRRC7Q96NW7 1537 aa18.69■□□□□ 0.58
COL18A1-206ENST00000459895 BCANQ96GW7 911 aa18.69■□□□□ 0.58
COL18A1-206ENST00000459895 TRPM1Q7Z4N2 1603 aa18.69■□□□□ 0.58
COL18A1-206ENST00000459895 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
COL18A1-206ENST00000459895 METP08581 1390 aa18.68■□□□□ 0.58
COL18A1-206ENST00000459895 ADGRB1O14514 1584 aa18.68■□□□□ 0.58
COL18A1-206ENST00000459895 VGFO15240 615 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-206ENST00000459895 PIK3R4Q99570 1358 aa18.67■□□□□ 0.58
COL18A1-206ENST00000459895 PRAG1Q86YV5 1406 aa18.66■□□□□ 0.58
COL18A1-206ENST00000459895 IQSEC2Q5JU85 1478 aa18.66■□□□□ 0.58
COL18A1-206ENST00000459895 ARHGEF28Q8N1W1 1705 aaKnown RBP18.64■□□□□ 0.57
COL18A1-206ENST00000459895 PTCH1Q13635 1447 aa18.64■□□□□ 0.57
COL18A1-206ENST00000459895 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
COL18A1-206ENST00000459895 TBX22Q9Y458 520 aa18.63■□□□□ 0.57
COL18A1-206ENST00000459895 DCAF11Q8TEB1 546 aa18.62■□□□□ 0.57
COL18A1-206ENST00000459895 TONSLQ96HA7 1378 aa18.61■□□□□ 0.57
COL18A1-206ENST00000459895 TECPR2O15040 1411 aa18.6■□□□□ 0.57
COL18A1-206ENST00000459895 CLSPNQ9HAW4 1339 aa18.58■□□□□ 0.57
COL18A1-206ENST00000459895 KCNA6P17658 529 aa18.58■□□□□ 0.56
COL18A1-206ENST00000459895 L3MBTL2Q969R5 705 aa18.58■□□□□ 0.56
COL18A1-206ENST00000459895 KDM2AQ9Y2K7 1162 aa18.58■□□□□ 0.56
COL18A1-206ENST00000459895 YTHDC2Q9H6S0 1430 aaKnown RBP18.57■□□□□ 0.56
COL18A1-206ENST00000459895 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.57■□□□□ 0.56
COL18A1-206ENST00000459895 TMEM94Q12767 1356 aa18.57■□□□□ 0.56
COL18A1-206ENST00000459895 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
COL18A1-206ENST00000459895 DLC1Q96QB1 1528 aa18.57■□□□□ 0.56
COL18A1-206ENST00000459895 LRPPRCP42704 1394 aaKnown RBP18.55■□□□□ 0.56
COL18A1-206ENST00000459895 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
COL18A1-206ENST00000459895 CFAP70Q5T0N1 1121 aa18.55■□□□□ 0.56
COL18A1-206ENST00000459895 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
COL18A1-206ENST00000459895 RALGAPBQ86X10 1494 aa18.54■□□□□ 0.56
COL18A1-206ENST00000459895 CDC42BPGQ6DT37 1551 aa18.54■□□□□ 0.56
COL18A1-206ENST00000459895 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
COL18A1-206ENST00000459895 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
COL18A1-206ENST00000459895 ADGRB2O60241 1585 aa18.52■□□□□ 0.56
COL18A1-206ENST00000459895 ADGRL3Q9HAR2 1447 aa18.52■□□□□ 0.56
COL18A1-206ENST00000459895 QRICH2Q9H0J4 1663 aa18.51■□□□□ 0.55
COL18A1-206ENST00000459895 TMEM132EQ6IEE7 984 aa18.51■□□□□ 0.55
COL18A1-206ENST00000459895 RBM33Q96EV2 1170 aaKnown RBP18.51■□□□□ 0.55
COL18A1-206ENST00000459895 STAC3Q96MF2 364 aa18.51■□□□□ 0.55
COL18A1-206ENST00000459895 FMN2Q9NZ56 1722 aa18.49■□□□□ 0.55
COL18A1-206ENST00000459895 ABCC11Q96J66 1382 aa18.48■□□□□ 0.55
COL18A1-206ENST00000459895 PLEKHH1Q9ULM0 1364 aa18.48■□□□□ 0.55
COL18A1-206ENST00000459895 PROSER2Q86WR7 435 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-206ENST00000459895 DCCP43146 1447 aa18.48■□□□□ 0.55
COL18A1-206ENST00000459895 FAM135BQ49AJ0 1406 aa18.48■□□□□ 0.55
COL18A1-206ENST00000459895 NCOA3Q9Y6Q9 1424 aa18.48■□□□□ 0.55
COL18A1-206ENST00000459895 ROBO1Q9Y6N7 1651 aa18.47■□□□□ 0.55
COL18A1-206ENST00000459895 STK26Q9P289 416 aa18.46■□□□□ 0.55
COL18A1-206ENST00000459895 MSH6P52701 1360 aa18.45■□□□□ 0.54
COL18A1-206ENST00000459895 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
COL18A1-206ENST00000459895 ROCK2O75116 1388 aaKnown RBP18.44■□□□□ 0.54
COL18A1-206ENST00000459895 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
COL18A1-206ENST00000459895 NBPF1Q3BBV0 1214 aa18.42■□□□□ 0.54
COL18A1-206ENST00000459895 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
COL18A1-206ENST00000459895 MST1RQ04912 1400 aa18.4■□□□□ 0.54
COL18A1-206ENST00000459895 TOPAZ1Q8N9V7 1692 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms