RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 PZPP20742 1482 aa17.12■□□□□ 0.33
KCNMA1-216ENST00000457953 HSP90AA2PQ14568 343 aaPredicted RBP17.11■□□□□ 0.33
KCNMA1-216ENST00000457953 RALBP1Q15311 655 aa17.1■□□□□ 0.33
KCNMA1-216ENST00000457953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.1■□□□□ 0.33
KCNMA1-216ENST00000457953 GPATCH8Q9UKJ3 1502 aaKnown RBP17.1■□□□□ 0.33
KCNMA1-216ENST00000457953 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
KCNMA1-216ENST00000457953 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
KCNMA1-216ENST00000457953 SYNJ2O15056 1496 aa17.08■□□□□ 0.33
KCNMA1-216ENST00000457953 KIAA1107Q9UPP5 1409 aa17.08■□□□□ 0.33
KCNMA1-216ENST00000457953 MBD5Q9P267 1494 aa17.08■□□□□ 0.33
KCNMA1-216ENST00000457953 CFAP70Q5T0N1 1121 aa17.07■□□□□ 0.32
KCNMA1-216ENST00000457953 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
KCNMA1-216ENST00000457953 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
KCNMA1-216ENST00000457953 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
KCNMA1-216ENST00000457953 CDK11BP21127 795 aaKnown RBP17.06■□□□□ 0.32
KCNMA1-216ENST00000457953 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
KCNMA1-216ENST00000457953 CASC1Q6TDU7 716 aa17.06■□□□□ 0.32
KCNMA1-216ENST00000457953 ZBED9Q6R2W3 1325 aa17.05■□□□□ 0.32
KCNMA1-216ENST00000457953 KIF14Q15058 1648 aa17.05■□□□□ 0.32
KCNMA1-216ENST00000457953 SHANK2Q9UPX8 1470 aa17.05■□□□□ 0.32
KCNMA1-216ENST00000457953 RAPGEF3O95398 923 aa17.04■□□□□ 0.32
KCNMA1-216ENST00000457953 ITPRIPQ8IWB1 547 aa17.04■□□□□ 0.32
KCNMA1-216ENST00000457953 GOLGA2Q08379 1002 aa17.04■□□□□ 0.32
KCNMA1-216ENST00000457953 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
KCNMA1-216ENST00000457953 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-216ENST00000457953 NOL8Q76FK4 1167 aaKnown RBP17.03■□□□□ 0.32
KCNMA1-216ENST00000457953 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
KCNMA1-216ENST00000457953 NUP160Q12769 1436 aa17.03■□□□□ 0.32
KCNMA1-216ENST00000457953 NFKBIBQ15653 356 aa17.02■□□□□ 0.32
KCNMA1-216ENST00000457953 FOXD4L6Q3SYB3 417 aaPredicted RBP17.02■□□□□ 0.32
KCNMA1-216ENST00000457953 FOXD4L3Q6VB84 417 aaPredicted RBP17.02■□□□□ 0.32
KCNMA1-216ENST00000457953 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.32
KCNMA1-216ENST00000457953 ARHGAP5Q13017 1502 aa17.02■□□□□ 0.32
KCNMA1-216ENST00000457953 APAF1O14727 1248 aa17.01■□□□□ 0.31
KCNMA1-216ENST00000457953 C9orf84Q5VXU9 1444 aa17.01■□□□□ 0.31
KCNMA1-216ENST00000457953 PKNOX2Q96KN3 472 aa17.01■□□□□ 0.31
KCNMA1-216ENST00000457953 GBP4Q96PP9 640 aa17.01■□□□□ 0.31
KCNMA1-216ENST00000457953 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
KCNMA1-216ENST00000457953 COG6Q9Y2V7 657 aa17■□□□□ 0.31
KCNMA1-216ENST00000457953 KCNJ4P48050 445 aa17■□□□□ 0.31
KCNMA1-216ENST00000457953 CDCA7LQ96GN5 454 aa17■□□□□ 0.31
KCNMA1-216ENST00000457953 KDM5DQ9BY66 1539 aa17■□□□□ 0.31
KCNMA1-216ENST00000457953 UHRF1BP1Q6BDS2 1440 aa17■□□□□ 0.31
KCNMA1-216ENST00000457953 CDC42BPAQ5VT25 1732 aa16.99■□□□□ 0.31
KCNMA1-216ENST00000457953 ELL2O00472 640 aaPredicted RBP16.99■□□□□ 0.31
KCNMA1-216ENST00000457953 ABCA8O94911 1581 aa16.99■□□□□ 0.31
KCNMA1-216ENST00000457953 ARHGEF12Q9NZN5 1544 aa16.99■□□□□ 0.31
KCNMA1-216ENST00000457953 SCAPERQ9BY12 1400 aa16.99■□□□□ 0.31
KCNMA1-216ENST00000457953 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
KCNMA1-216ENST00000457953 RWDD1Q9H446 243 aaPredicted RBP16.98■□□□□ 0.31
KCNMA1-216ENST00000457953 KDM5CP41229 1560 aa16.98■□□□□ 0.31
KCNMA1-216ENST00000457953 DRC7Q8IY82 874 aa16.97■□□□□ 0.31
KCNMA1-216ENST00000457953 RSPH6AQ9H0K4 717 aa16.97■□□□□ 0.31
KCNMA1-216ENST00000457953 ABCC10Q5T3U5 1492 aa16.97■□□□□ 0.31
KCNMA1-216ENST00000457953 GOLGA6L4A6NEF3 574 aa16.97■□□□□ 0.31
KCNMA1-216ENST00000457953 FGD1P98174 961 aa16.97■□□□□ 0.31
KCNMA1-216ENST00000457953 RALGAPBQ86X10 1494 aa16.96■□□□□ 0.31
KCNMA1-216ENST00000457953 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
KCNMA1-216ENST00000457953 FRAT2O75474 233 aaPredicted RBP16.95■□□□□ 0.3
KCNMA1-216ENST00000457953 DHX29Q7Z478 1369 aaKnown RBP16.95■□□□□ 0.3
KCNMA1-216ENST00000457953 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
KCNMA1-216ENST00000457953 ARHGEF5Q12774 1597 aa16.95■□□□□ 0.3
KCNMA1-216ENST00000457953 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
KCNMA1-216ENST00000457953 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
KCNMA1-216ENST00000457953 BCORL1Q5H9F3 1711 aa16.94■□□□□ 0.3
KCNMA1-216ENST00000457953 MS4A1P11836 297 aa16.94■□□□□ 0.3
KCNMA1-216ENST00000457953 OS9Q13438 667 aaPredicted RBP16.94■□□□□ 0.3
KCNMA1-216ENST00000457953 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
KCNMA1-216ENST00000457953 SKAP1Q86WV1 359 aa16.92■□□□□ 0.3
KCNMA1-216ENST00000457953 LTV1Q96GA3 475 aaPredicted RBP16.92■□□□□ 0.3
KCNMA1-216ENST00000457953 ADAMTS8Q9UP79 889 aa16.92■□□□□ 0.3
KCNMA1-216ENST00000457953 FAM13BQ9NYF5 915 aa16.91■□□□□ 0.3
KCNMA1-216ENST00000457953 ATP10BO94823 1461 aa16.91■□□□□ 0.3
KCNMA1-216ENST00000457953 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
KCNMA1-216ENST00000457953 HAP1P54257 671 aaPredicted RBP16.91■□□□□ 0.3
KCNMA1-216ENST00000457953 KIAA2012Q0VF49 1180 aa16.91■□□□□ 0.3
KCNMA1-216ENST00000457953 DDX49Q9Y6V7 483 aaKnown RBP16.91■□□□□ 0.3
KCNMA1-216ENST00000457953 PDE3BQ13370 1112 aa16.9■□□□□ 0.3
KCNMA1-216ENST00000457953 SMG6Q86US8 1419 aaKnown RBP16.9■□□□□ 0.3
KCNMA1-216ENST00000457953 CENPJQ9HC77 1338 aaPredicted RBP16.9■□□□□ 0.3
KCNMA1-216ENST00000457953 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
KCNMA1-216ENST00000457953 EIF3AQ14152 1382 aaKnown RBP16.9■□□□□ 0.3
KCNMA1-216ENST00000457953 CENPQQ7L2Z9 268 aaPredicted RBP16.89■□□□□ 0.3
KCNMA1-216ENST00000457953 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
KCNMA1-216ENST00000457953 TULP1O00294 542 aaPredicted RBP16.87■□□□□ 0.29
KCNMA1-216ENST00000457953 TERF2IPQ9NYB0 399 aa16.87■□□□□ 0.29
KCNMA1-216ENST00000457953 PMFBP1Q8TBY8 1022 aa16.86■□□□□ 0.29
KCNMA1-216ENST00000457953 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
KCNMA1-216ENST00000457953 HDGFP51858 240 aaKnown RBP16.83■□□□□ 0.29
KCNMA1-216ENST00000457953 IPO8O15397 1037 aaKnown RBP16.83■□□□□ 0.28
KCNMA1-216ENST00000457953 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
KCNMA1-216ENST00000457953 CCDC141Q6ZP82 1450 aa16.83■□□□□ 0.28
KCNMA1-216ENST00000457953 PREX2Q70Z35 1606 aa16.83■□□□□ 0.28
KCNMA1-216ENST00000457953 BACH2Q9BYV9 841 aa16.83■□□□□ 0.28
KCNMA1-216ENST00000457953 RNF123Q5XPI4 1314 aa16.82■□□□□ 0.28
KCNMA1-216ENST00000457953 E9PCH4 1651 aa16.81■□□□□ 0.28
KCNMA1-216ENST00000457953 HMOX1P09601 288 aa16.81■□□□□ 0.28
KCNMA1-216ENST00000457953 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
KCNMA1-216ENST00000457953 CHMP4BQ9H444 224 aaKnown RBP16.8■□□□□ 0.28
KCNMA1-216ENST00000457953 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms