RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 DDX49Q9Y6V7 483 aaKnown RBP14.47□□□□□ -0.09
SMARCAD1-204ENST00000457823 EVA1CP58658 441 aa14.47□□□□□ -0.09
SMARCAD1-204ENST00000457823 FKBP5Q13451 457 aaPredicted RBP14.47□□□□□ -0.09
SMARCAD1-204ENST00000457823 SF3A1Q15459 793 aaKnown RBP14.47□□□□□ -0.09
SMARCAD1-204ENST00000457823 KIF3AQ9Y496 699 aa14.47□□□□□ -0.09
SMARCAD1-204ENST00000457823 TTC5Q8N0Z6 440 aa14.46□□□□□ -0.09
SMARCAD1-204ENST00000457823 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.1
SMARCAD1-204ENST00000457823 RASSF8Q8NHQ8 419 aa14.46□□□□□ -0.1
SMARCAD1-204ENST00000457823 ARID3AQ99856 593 aa14.46□□□□□ -0.1
SMARCAD1-204ENST00000457823 USP35Q9P2H5 1018 aa14.45□□□□□ -0.1
SMARCAD1-204ENST00000457823 MTHFSP49914 203 aa14.45□□□□□ -0.1
SMARCAD1-204ENST00000457823 DIAPH3Q9NSV4 1193 aa14.45□□□□□ -0.1
SMARCAD1-204ENST00000457823 NCAPD3P42695 1498 aa14.45□□□□□ -0.1
SMARCAD1-204ENST00000457823 NCOA2Q15596 1464 aa14.44□□□□□ -0.1
SMARCAD1-204ENST00000457823 G3V3G9 751 aa14.44□□□□□ -0.1
SMARCAD1-204ENST00000457823 TPM4P67936 248 aa14.44□□□□□ -0.1
SMARCAD1-204ENST00000457823 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
SMARCAD1-204ENST00000457823 NBPF1Q3BBV0 1214 aa14.44□□□□□ -0.1
SMARCAD1-204ENST00000457823 LNPKQ9C0E8 428 aa14.44□□□□□ -0.1
SMARCAD1-204ENST00000457823 DDX11L8A8MPP1 907 aa14.43□□□□□ -0.1
SMARCAD1-204ENST00000457823 GNAI1P63096 354 aa14.43□□□□□ -0.1
SMARCAD1-204ENST00000457823 PANK1Q8TE04 598 aa14.43□□□□□ -0.1
SMARCAD1-204ENST00000457823 REC8O95072 547 aa14.43□□□□□ -0.1
SMARCAD1-204ENST00000457823 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.43□□□□□ -0.1
SMARCAD1-204ENST00000457823 CREBRFQ8IUR6 639 aa14.43□□□□□ -0.1
SMARCAD1-204ENST00000457823 CDCA7LQ96GN5 454 aa14.43□□□□□ -0.1
SMARCAD1-204ENST00000457823 CASKIN1Q8WXD9 1431 aa14.43□□□□□ -0.1
SMARCAD1-204ENST00000457823 H3BQV1 296 aa14.42□□□□□ -0.1
SMARCAD1-204ENST00000457823 IFFO2Q5TF58 517 aa14.42□□□□□ -0.1
SMARCAD1-204ENST00000457823 FAM184AQ8NB25 1140 aa14.42□□□□□ -0.1
SMARCAD1-204ENST00000457823 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
SMARCAD1-204ENST00000457823 TCP11L2Q8N4U5 519 aa14.42□□□□□ -0.1
SMARCAD1-204ENST00000457823 TSPYL4Q9UJ04 414 aa14.42□□□□□ -0.1
SMARCAD1-204ENST00000457823 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
SMARCAD1-204ENST00000457823 PHF14O94880 888 aa14.41□□□□□ -0.1
SMARCAD1-204ENST00000457823 NUTM2GQ5VZR2 741 aa14.41□□□□□ -0.1
SMARCAD1-204ENST00000457823 IFIT2P09913 472 aaKnown RBP14.4□□□□□ -0.1
SMARCAD1-204ENST00000457823 RUFY2Q8WXA3 655 aa14.4□□□□□ -0.1
SMARCAD1-204ENST00000457823 MIA2Q96PC5 1412 aa14.4□□□□□ -0.1
SMARCAD1-204ENST00000457823 ZKSCAN1P17029 563 aaPredicted RBP14.4□□□□□ -0.1
SMARCAD1-204ENST00000457823 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
SMARCAD1-204ENST00000457823 ANO2Q9NQ90 1003 aa14.4□□□□□ -0.1
SMARCAD1-204ENST00000457823 ATP6V1DQ9Y5K8 247 aa14.4□□□□□ -0.1
SMARCAD1-204ENST00000457823 NLRP6P59044 892 aa14.39□□□□□ -0.11
SMARCAD1-204ENST00000457823 CUX1P39880 1505 aa14.39□□□□□ -0.11
SMARCAD1-204ENST00000457823 DDX58O95786 925 aaKnown RBP14.39□□□□□ -0.11
SMARCAD1-204ENST00000457823 GSE1Q14687 1217 aa14.39□□□□□ -0.11
SMARCAD1-204ENST00000457823 SYTL4Q96C24 671 aaPredicted RBP14.39□□□□□ -0.11
SMARCAD1-204ENST00000457823 NBPF8Q3BBV2 869 aa14.38□□□□□ -0.11
SMARCAD1-204ENST00000457823 FANCIQ9NVI1 1328 aa14.38□□□□□ -0.11
SMARCAD1-204ENST00000457823 FYCO1Q9BQS8 1478 aa14.38□□□□□ -0.11
SMARCAD1-204ENST00000457823 G3BP1Q13283 466 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMARCAD1-204ENST00000457823 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.38□□□□□ -0.11
SMARCAD1-204ENST00000457823 BRD4O60885 1362 aaPredicted RBP14.38□□□□□ -0.11
SMARCAD1-204ENST00000457823 MCTP1Q6DN14 999 aa14.37□□□□□ -0.11
SMARCAD1-204ENST00000457823 RAPGEF4Q8WZA2 1011 aa14.37□□□□□ -0.11
SMARCAD1-204ENST00000457823 CFTRP13569 1480 aa14.37□□□□□ -0.11
SMARCAD1-204ENST00000457823 PPP2R1AP30153 589 aa14.37□□□□□ -0.11
SMARCAD1-204ENST00000457823 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
SMARCAD1-204ENST00000457823 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
SMARCAD1-204ENST00000457823 MARCH6O60337 910 aa14.36□□□□□ -0.11
SMARCAD1-204ENST00000457823 NLRP2Q9NX02 1062 aa14.36□□□□□ -0.11
SMARCAD1-204ENST00000457823 LRRFIP1Q32MZ4 808 aaKnown RBP14.35□□□□□ -0.11
SMARCAD1-204ENST00000457823 CPLX2Q6PUV4 134 aaKnown RBP14.35□□□□□ -0.11
SMARCAD1-204ENST00000457823 APPP05067 770 aa14.35□□□□□ -0.11
SMARCAD1-204ENST00000457823 CHMP5Q9NZZ3 219 aa14.35□□□□□ -0.11
SMARCAD1-204ENST00000457823 AKAP17AQ02040 695 aaKnown RBP14.34□□□□□ -0.11
SMARCAD1-204ENST00000457823 AIMP1Q12904 312 aaKnown RBP14.34□□□□□ -0.11
SMARCAD1-204ENST00000457823 CHMP4CQ96CF2 233 aa14.34□□□□□ -0.11
SMARCAD1-204ENST00000457823 BECN2A8MW95 431 aa14.34□□□□□ -0.11
SMARCAD1-204ENST00000457823 SYNE3Q6ZMZ3 975 aa14.34□□□□□ -0.11
SMARCAD1-204ENST00000457823 C22orf23Q9BZE7 217 aa14.34□□□□□ -0.11
SMARCAD1-204ENST00000457823 GRIN2BQ13224 1484 aa14.33□□□□□ -0.11
SMARCAD1-204ENST00000457823 PRKAR2BP31323 418 aa14.33□□□□□ -0.12
SMARCAD1-204ENST00000457823 ROCK1Q13464 1354 aa14.33□□□□□ -0.12
SMARCAD1-204ENST00000457823 RRBP1Q9P2E9 1410 aaKnown RBP14.33□□□□□ -0.12
SMARCAD1-204ENST00000457823 PES1O00541 588 aaKnown RBP14.32□□□□□ -0.12
SMARCAD1-204ENST00000457823 INTS3Q68E01 1043 aaKnown RBP14.32□□□□□ -0.12
SMARCAD1-204ENST00000457823 PRAM1Q96QH2 718 aa14.32□□□□□ -0.12
SMARCAD1-204ENST00000457823 GOLGA6L19H0YKK7 550 aa14.32□□□□□ -0.12
SMARCAD1-204ENST00000457823 EXOSC9Q06265 439 aaKnown RBP14.32□□□□□ -0.12
SMARCAD1-204ENST00000457823 CPLX1O14810 134 aa14.32□□□□□ -0.12
SMARCAD1-204ENST00000457823 PRDM2Q13029 1718 aa14.31□□□□□ -0.12
SMARCAD1-204ENST00000457823 HSP90AB4PQ58FF6 505 aa14.31□□□□□ -0.12
SMARCAD1-204ENST00000457823 VPS53Q5VIR6 699 aa14.31□□□□□ -0.12
SMARCAD1-204ENST00000457823 RIC3Q7Z5B4 369 aa14.31□□□□□ -0.12
SMARCAD1-204ENST00000457823 ATF3P18847 181 aa14.31□□□□□ -0.12
SMARCAD1-204ENST00000457823 AAMPQ13685 434 aa14.31□□□□□ -0.12
SMARCAD1-204ENST00000457823 RNF20Q5VTR2 975 aa14.31□□□□□ -0.12
SMARCAD1-204ENST00000457823 TXNDC2Q86VQ3 553 aa14.31□□□□□ -0.12
SMARCAD1-204ENST00000457823 PRG4Q92954 1404 aaPredicted RBP14.31□□□□□ -0.12
SMARCAD1-204ENST00000457823 MSH5O43196 834 aa14.3□□□□□ -0.12
SMARCAD1-204ENST00000457823 UBTFL1P0CB47 393 aaPredicted RBP14.3□□□□□ -0.12
SMARCAD1-204ENST00000457823 NOC3LQ8WTT2 800 aaKnown RBP14.3□□□□□ -0.12
SMARCAD1-204ENST00000457823 VPS37CA5D8V6 355 aaPredicted RBP14.3□□□□□ -0.12
SMARCAD1-204ENST00000457823 ABTB2Q8N961 1025 aa14.3□□□□□ -0.12
SMARCAD1-204ENST00000457823 ARHGAP5Q13017 1502 aa14.29□□□□□ -0.12
SMARCAD1-204ENST00000457823 NEUROD6Q96NK8 337 aa14.29□□□□□ -0.12
SMARCAD1-204ENST00000457823 PNISRQ8TF01 805 aaKnown RBP14.29□□□□□ -0.12
SMARCAD1-204ENST00000457823 TRDNQ13061 729 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms