RNA–Protein interactions for RNA: ENST00000457029.3

FARP1-205, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-205ENST00000457029 EFCAB6Q5THR3 1501 aa12.77□□□□□ -0.37
FARP1-205ENST00000457029 CAPN15O75808 1086 aa12.76□□□□□ -0.37
FARP1-205ENST00000457029 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
FARP1-205ENST00000457029 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
FARP1-205ENST00000457029 NUP155O75694 1391 aa12.76□□□□□ -0.37
FARP1-205ENST00000457029 ANKRD30BQ9BXX2 1392 aa12.76□□□□□ -0.37
FARP1-205ENST00000457029 ABCC3O15438 1527 aa12.75□□□□□ -0.37
FARP1-205ENST00000457029 STRCP1A6NGW2 1772 aa12.74□□□□□ -0.37
FARP1-205ENST00000457029 CLTCQ00610 1675 aaKnown RBP12.73□□□□□ -0.37
FARP1-205ENST00000457029 E9PCH4 1651 aa12.73□□□□□ -0.37
FARP1-205ENST00000457029 SYNMO15061 1565 aa12.73□□□□□ -0.37
FARP1-205ENST00000457029 TRIM52Q96A61 297 aa12.72□□□□□ -0.37
FARP1-205ENST00000457029 RPRD2Q5VT52 1461 aaKnown RBP12.72□□□□□ -0.37
FARP1-205ENST00000457029 CEP152O94986 1710 aa12.71□□□□□ -0.37
FARP1-205ENST00000457029 TRPM2O94759 1503 aa12.71□□□□□ -0.38
FARP1-205ENST00000457029 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
FARP1-205ENST00000457029 LRRC7Q96NW7 1537 aa12.7□□□□□ -0.38
FARP1-205ENST00000457029 ARHGAP31Q2M1Z3 1444 aa12.7□□□□□ -0.38
FARP1-205ENST00000457029 KANK1Q14678 1352 aa12.69□□□□□ -0.38
FARP1-205ENST00000457029 KIF3BO15066 747 aa12.69□□□□□ -0.38
FARP1-205ENST00000457029 ANKLE2Q86XL3 938 aa12.69□□□□□ -0.38
FARP1-205ENST00000457029 SPHKAPQ2M3C7 1700 aa12.68□□□□□ -0.38
FARP1-205ENST00000457029 MED14O60244 1454 aa12.67□□□□□ -0.38
FARP1-205ENST00000457029 NPHP4O75161 1426 aaPredicted RBP12.67□□□□□ -0.38
FARP1-205ENST00000457029 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
FARP1-205ENST00000457029 SETBP1Q9Y6X0 1596 aa12.65□□□□□ -0.38
FARP1-205ENST00000457029 EP400Q96L91 3159 aa12.65□□□□□ -0.38
FARP1-205ENST00000457029 NOS1P29475 1434 aa12.64□□□□□ -0.39
FARP1-205ENST00000457029 XIRP1Q702N8 1843 aaKnown RBP12.64□□□□□ -0.39
FARP1-205ENST00000457029 IQGAP1P46940 1657 aa12.64□□□□□ -0.39
FARP1-205ENST00000457029 FAM135BQ49AJ0 1406 aa12.63□□□□□ -0.39
FARP1-205ENST00000457029 PIK3C2BO00750 1634 aa12.63□□□□□ -0.39
FARP1-205ENST00000457029 IFFO2Q5TF58 517 aa12.63□□□□□ -0.39
FARP1-205ENST00000457029 TNRQ92752 1358 aa12.63□□□□□ -0.39
FARP1-205ENST00000457029 CLTCL1P53675 1640 aa12.62□□□□□ -0.39
FARP1-205ENST00000457029 SIN3AQ96ST3 1273 aa12.62□□□□□ -0.39
FARP1-205ENST00000457029 THEMISQ8N1K5 641 aaPredicted RBP12.61□□□□□ -0.39
FARP1-205ENST00000457029 GGT6Q6P531 493 aa12.6□□□□□ -0.39
FARP1-205ENST00000457029 CCDC144AA2RUR9 1427 aa12.6□□□□□ -0.39
FARP1-205ENST00000457029 SPATA31E1Q6ZUB1 1445 aa12.6□□□□□ -0.39
FARP1-205ENST00000457029 ADGRB3O60242 1522 aa12.59□□□□□ -0.39
FARP1-205ENST00000457029 DSG3P32926 999 aa12.59□□□□□ -0.39
FARP1-205ENST00000457029 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
FARP1-205ENST00000457029 NLRP1Q9C000 1473 aa12.58□□□□□ -0.4
FARP1-205ENST00000457029 TONSLQ96HA7 1378 aa12.57□□□□□ -0.4
FARP1-205ENST00000457029 UGGT1Q9NYU2 1555 aa12.57□□□□□ -0.4
FARP1-205ENST00000457029 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
FARP1-205ENST00000457029 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
FARP1-205ENST00000457029 ROBO1Q9Y6N7 1651 aa12.56□□□□□ -0.4
FARP1-205ENST00000457029 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
FARP1-205ENST00000457029 ABCB7O75027 752 aa12.55□□□□□ -0.4
FARP1-205ENST00000457029 CDK12Q9NYV4 1490 aaPredicted RBP12.54□□□□□ -0.4
FARP1-205ENST00000457029 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
FARP1-205ENST00000457029 JCADQ9P266 1359 aa12.54□□□□□ -0.4
FARP1-205ENST00000457029 IFT172Q9UG01 1749 aa12.54□□□□□ -0.4
FARP1-205ENST00000457029 LRP6O75581 1613 aa12.53□□□□□ -0.4
FARP1-205ENST00000457029 NEUROD1Q13562 356 aa12.52□□□□□ -0.41
FARP1-205ENST00000457029 FBXO31Q5XUX0 539 aaPredicted RBP12.52□□□□□ -0.41
FARP1-205ENST00000457029 PPP1R15AO75807 674 aaPredicted RBP12.51□□□□□ -0.41
FARP1-205ENST00000457029 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
FARP1-205ENST00000457029 MYOM2P54296 1465 aa12.51□□□□□ -0.41
FARP1-205ENST00000457029 KDM5AP29375 1690 aaKnown RBP12.51□□□□□ -0.41
FARP1-205ENST00000457029 KIF1BO60333 1816 aa12.51□□□□□ -0.41
FARP1-205ENST00000457029 RXRBP28702 533 aa12.5□□□□□ -0.41
FARP1-205ENST00000457029 L3MBTL2Q969R5 705 aa12.5□□□□□ -0.41
FARP1-205ENST00000457029 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
FARP1-205ENST00000457029 NRXN1Q9ULB1 1477 aa12.5□□□□□ -0.41
FARP1-205ENST00000457029 TMEM131LA2VDJ0 1609 aa12.49□□□□□ -0.41
FARP1-205ENST00000457029 RALGAPBQ86X10 1494 aa12.49□□□□□ -0.41
FARP1-205ENST00000457029 PHLPP1O60346 1717 aa12.48□□□□□ -0.41
FARP1-205ENST00000457029 PRAG1Q86YV5 1406 aa12.48□□□□□ -0.41
FARP1-205ENST00000457029 LRP5O75197 1615 aa12.48□□□□□ -0.41
FARP1-205ENST00000457029 SPATA31A6Q5VVP1 1343 aa12.47□□□□□ -0.41
FARP1-205ENST00000457029 MEX3CQ5U5Q3 659 aaKnown RBP12.47□□□□□ -0.41
FARP1-205ENST00000457029 POTEHQ6S545 545 aa12.47□□□□□ -0.41
FARP1-205ENST00000457029 LAMC1P11047 1609 aa12.47□□□□□ -0.41
FARP1-205ENST00000457029 NEXMIFQ5QGS0 1516 aa12.47□□□□□ -0.41
FARP1-205ENST00000457029 PPLO60437 1756 aa12.46□□□□□ -0.41
FARP1-205ENST00000457029 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
FARP1-205ENST00000457029 TRPM1Q7Z4N2 1603 aa12.46□□□□□ -0.41
FARP1-205ENST00000457029 SCAF11Q99590 1463 aaKnown RBP12.46□□□□□ -0.42
FARP1-205ENST00000457029 RGS12O14924 1447 aa12.45□□□□□ -0.42
FARP1-205ENST00000457029 TMEM94Q12767 1356 aa12.45□□□□□ -0.42
FARP1-205ENST00000457029 KIAA1210Q9ULL0 1709 aa12.45□□□□□ -0.42
FARP1-205ENST00000457029 GPRASP1Q5JY77 1395 aa12.44□□□□□ -0.42
FARP1-205ENST00000457029 STAC3Q96MF2 364 aa12.44□□□□□ -0.42
FARP1-205ENST00000457029 ZFYVE9O95405 1425 aa12.44□□□□□ -0.42
FARP1-205ENST00000457029 COL16A1Q07092 1604 aaPredicted RBP12.43□□□□□ -0.42
FARP1-205ENST00000457029 CEP350Q5VT06 3117 aa12.43□□□□□ -0.42
FARP1-205ENST00000457029 NBPF8Q3BBV2 869 aa12.42□□□□□ -0.42
FARP1-205ENST00000457029 UBR1Q8IWV7 1749 aa12.42□□□□□ -0.42
FARP1-205ENST00000457029 CFAP65Q6ZU64 1925 aaKnown RBP12.41□□□□□ -0.42
FARP1-205ENST00000457029 PIK3C2GO75747 1445 aa12.41□□□□□ -0.42
FARP1-205ENST00000457029 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
FARP1-205ENST00000457029 RPGRIP1LQ68CZ1 1315 aa12.4□□□□□ -0.42
FARP1-205ENST00000457029 IDI1Q13907 227 aa12.4□□□□□ -0.42
FARP1-205ENST00000457029 MSH6P52701 1360 aa12.38□□□□□ -0.43
FARP1-205ENST00000457029 ARHGAP23Q9P227 1491 aa12.38□□□□□ -0.43
FARP1-205ENST00000457029 SHPRHQ149N8 1683 aa12.38□□□□□ -0.43
FARP1-205ENST00000457029 SLIT1O75093 1534 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms