RNA–Protein interactions for RNA: ENST00000454269.5

HCG18-240, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,430 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-240ENST00000454269 LMOD3Q0VAK6 560 aa11.16□□□□□ -0.62
HCG18-240ENST00000454269 JPH4Q96JJ6 628 aa11.16□□□□□ -0.62
HCG18-240ENST00000454269 CUL7Q14999 1698 aa11.16□□□□□ -0.62
HCG18-240ENST00000454269 CASC1Q6TDU7 716 aa11.16□□□□□ -0.62
HCG18-240ENST00000454269 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
HCG18-240ENST00000454269 KIF27Q86VH2 1401 aa11.15□□□□□ -0.62
HCG18-240ENST00000454269 ADCY10Q96PN6 1610 aa11.15□□□□□ -0.62
HCG18-240ENST00000454269 NBPF10Q6P3W6 841 aaKnown RBP11.15□□□□□ -0.63
HCG18-240ENST00000454269 MPNDQ8N594 471 aa11.14□□□□□ -0.63
HCG18-240ENST00000454269 CHMP4CQ96CF2 233 aa11.14□□□□□ -0.63
HCG18-240ENST00000454269 TSPYL1Q9H0U9 437 aa11.14□□□□□ -0.63
HCG18-240ENST00000454269 CGNQ9P2M7 1197 aaKnown RBP11.14□□□□□ -0.63
HCG18-240ENST00000454269 EFCC1Q9HA90 598 aa11.13□□□□□ -0.63
HCG18-240ENST00000454269 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
HCG18-240ENST00000454269 GOLIM4O00461 696 aa11.13□□□□□ -0.63
HCG18-240ENST00000454269 FAM50AQ14320 339 aaKnown RBP11.13□□□□□ -0.63
HCG18-240ENST00000454269 HSP90AB4PQ58FF6 505 aa11.13□□□□□ -0.63
HCG18-240ENST00000454269 BSDC1Q9NW68 430 aaPredicted RBP11.12□□□□□ -0.63
HCG18-240ENST00000454269 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
HCG18-240ENST00000454269 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
HCG18-240ENST00000454269 FAM9BQ8IZU0 186 aa11.11□□□□□ -0.63
HCG18-240ENST00000454269 CCER2I3L3R5 266 aa11.11□□□□□ -0.63
HCG18-240ENST00000454269 CEP83Q9Y592 693 aa11.11□□□□□ -0.63
HCG18-240ENST00000454269 CARMIL1Q5VZK9 1371 aa11.11□□□□□ -0.63
HCG18-240ENST00000454269 NBPF6Q5VWK0 638 aa11.1□□□□□ -0.63
HCG18-240ENST00000454269 NBPF5PQ86XG9 351 aaPredicted RBP11.1□□□□□ -0.63
HCG18-240ENST00000454269 NBPF4Q96M43 638 aa11.1□□□□□ -0.63
HCG18-240ENST00000454269 TSPOAP1O95153 1857 aa11.1□□□□□ -0.63
HCG18-240ENST00000454269 NECTIN2Q92692 538 aa11.1□□□□□ -0.63
HCG18-240ENST00000454269 SSR1P43307 286 aaKnown RBP11.09□□□□□ -0.63
HCG18-240ENST00000454269 FAM177A1Q8N128 213 aaPredicted RBP11.09□□□□□ -0.63
HCG18-240ENST00000454269 KIAA0586Q9BVV6 1533 aa11.09□□□□□ -0.63
HCG18-240ENST00000454269 OFD1O75665 1012 aa11.09□□□□□ -0.63
HCG18-240ENST00000454269 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
HCG18-240ENST00000454269 RNF217Q8TC41 542 aa11.09□□□□□ -0.63
HCG18-240ENST00000454269 TMC1Q8TDI8 760 aa11.09□□□□□ -0.63
HCG18-240ENST00000454269 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
HCG18-240ENST00000454269 DYNC1I1O14576 645 aa11.08□□□□□ -0.64
HCG18-240ENST00000454269 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
HCG18-240ENST00000454269 ZKSCAN8Q15776 578 aaPredicted RBP11.08□□□□□ -0.64
HCG18-240ENST00000454269 B4GALNT3Q6L9W6 998 aa11.08□□□□□ -0.64
HCG18-240ENST00000454269 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.08□□□□□ -0.64
HCG18-240ENST00000454269 TSHZ1Q6ZSZ6 1077 aa11.08□□□□□ -0.64
HCG18-240ENST00000454269 EP400NLQ6ZTU2 488 aa11.08□□□□□ -0.64
HCG18-240ENST00000454269 ZBTB7CA1YPR0 619 aa11.08□□□□□ -0.64
HCG18-240ENST00000454269 ARID4AP29374 1257 aaPredicted RBP11.07□□□□□ -0.64
HCG18-240ENST00000454269 MYCBPQ99417 103 aaPredicted RBP11.07□□□□□ -0.64
HCG18-240ENST00000454269 IQGAP2Q13576 1575 aa11.07□□□□□ -0.64
HCG18-240ENST00000454269 RBM28Q9NW13 759 aaKnown RBP11.06□□□□□ -0.64
HCG18-240ENST00000454269 TULP2O00295 520 aa11.06□□□□□ -0.64
HCG18-240ENST00000454269 XRCC6P12956 609 aaKnown RBP eCLIP11.06□□□□□ -0.641e-10■■■■■ 44.1
HCG18-240ENST00000454269 RGL3Q3MIN7 710 aa11.06□□□□□ -0.64
HCG18-240ENST00000454269 RINLQ6ZS11 566 aa11.06□□□□□ -0.64
HCG18-240ENST00000454269 PRXQ9BXM0 1461 aa11.05□□□□□ -0.64
HCG18-240ENST00000454269 FSD2A1L4K1 749 aa11.05□□□□□ -0.64
HCG18-240ENST00000454269 KCNJ4P48050 445 aa11.05□□□□□ -0.64
HCG18-240ENST00000454269 BRPF1P55201 1214 aaPredicted RBP11.05□□□□□ -0.64
HCG18-240ENST00000454269 CT47A1Q5JQC4 288 aaPredicted RBP11.05□□□□□ -0.64
HCG18-240ENST00000454269 CCDC172P0C7W6 258 aa11.05□□□□□ -0.64
HCG18-240ENST00000454269 ZBED9Q6R2W3 1325 aa11.04□□□□□ -0.64
HCG18-240ENST00000454269 DISP1Q96F81 1524 aa11.04□□□□□ -0.64
HCG18-240ENST00000454269 STK26Q9P289 416 aa11.04□□□□□ -0.64
HCG18-240ENST00000454269 CLIP1P30622 1438 aa11.04□□□□□ -0.64
HCG18-240ENST00000454269 DIP2BQ9P265 1576 aa11.04□□□□□ -0.64
HCG18-240ENST00000454269 SIRT1Q96EB6 747 aa11.04□□□□□ -0.64
HCG18-240ENST00000454269 ERBB4Q15303 1308 aa11.03□□□□□ -0.64
HCG18-240ENST00000454269 FRAT2O75474 233 aaPredicted RBP11.03□□□□□ -0.64
HCG18-240ENST00000454269 TRIM52Q96A61 297 aa11.03□□□□□ -0.64
HCG18-240ENST00000454269 NCAPGQ9BPX3 1015 aa11.03□□□□□ -0.64
HCG18-240ENST00000454269 CTTNBP2Q8WZ74 1663 aa11.03□□□□□ -0.64
HCG18-240ENST00000454269 KDM4AO75164 1064 aa11.03□□□□□ -0.64
HCG18-240ENST00000454269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.03□□□□□ -0.641e-6■■■■□ 21.3
HCG18-240ENST00000454269 EXOC8Q8IYI6 725 aa11.03□□□□□ -0.64
HCG18-240ENST00000454269 SGSM3Q96HU1 749 aa11.03□□□□□ -0.64
HCG18-240ENST00000454269 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
HCG18-240ENST00000454269 TRIM34Q9BYJ4 488 aa11.02□□□□□ -0.65
HCG18-240ENST00000454269 CCDC66A2RUB6 948 aa11.01□□□□□ -0.65
HCG18-240ENST00000454269 MTA1Q13330 715 aa11.01□□□□□ -0.65
HCG18-240ENST00000454269 SMC4Q9NTJ3 1288 aa11.01□□□□□ -0.65
HCG18-240ENST00000454269 ZNF513Q8N8E2 541 aaPredicted RBP11□□□□□ -0.65
HCG18-240ENST00000454269 ZBTB9Q96C00 473 aa11□□□□□ -0.65
HCG18-240ENST00000454269 BORCS6Q96GS4 357 aa11□□□□□ -0.65
HCG18-240ENST00000454269 CFAP65Q6ZU64 1925 aaKnown RBP11□□□□□ -0.65
HCG18-240ENST00000454269 ANKRD23Q86SG2 305 aa11□□□□□ -0.65
HCG18-240ENST00000454269 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11□□□□□ -0.654e-7■■■■■ 57.7
HCG18-240ENST00000454269 KIF16BQ96L93 1317 aa11□□□□□ -0.65
HCG18-240ENST00000454269 ABCC2Q92887 1545 aa11□□□□□ -0.65
HCG18-240ENST00000454269 FAM69CQ0P6D2 419 aa10.99□□□□□ -0.65
HCG18-240ENST00000454269 TIGD1Q96MW7 591 aa10.99□□□□□ -0.65
HCG18-240ENST00000454269 KIAA0556O60303 1618 aa10.99□□□□□ -0.65
HCG18-240ENST00000454269 MAPKBP1O60336 1514 aa10.99□□□□□ -0.65
HCG18-240ENST00000454269 ABCC10Q5T3U5 1492 aa10.98□□□□□ -0.65
HCG18-240ENST00000454269 PTPRGP23470 1445 aa10.98□□□□□ -0.65
HCG18-240ENST00000454269 CAPN2P17655 700 aa10.98□□□□□ -0.65
HCG18-240ENST00000454269 ZNF428Q96B54 188 aa10.98□□□□□ -0.65
HCG18-240ENST00000454269 KIF3AQ9Y496 699 aa10.98□□□□□ -0.65
HCG18-240ENST00000454269 NRDCO43847 1150 aa10.98□□□□□ -0.65
HCG18-240ENST00000454269 SETDB1Q15047 1291 aa10.98□□□□□ -0.65
HCG18-240ENST00000454269 ITFG2Q969R8 447 aa10.98□□□□□ -0.65
HCG18-240ENST00000454269 MKL1Q969V6 931 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms