RNA–Protein interactions for RNA: ENST00000452034.5

KDM3A-206, Transcript of lysine demethylase 3A, humanhuman

TSL 5

Gene KDM3A, Length 709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-206ENST00000452034 SCAF11Q99590 1463 aaKnown RBP22.51■■□□□ 1.19
KDM3A-206ENST00000452034 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
KDM3A-206ENST00000452034 PPLO60437 1756 aa22.49■■□□□ 1.19
KDM3A-206ENST00000452034 RGL3Q3MIN7 710 aa22.49■■□□□ 1.19
KDM3A-206ENST00000452034 ANKLE2Q86XL3 938 aa22.49■■□□□ 1.19
KDM3A-206ENST00000452034 TXNDC2Q86VQ3 553 aa22.48■■□□□ 1.19
KDM3A-206ENST00000452034 SENP3Q9H4L4 574 aaPredicted RBP22.48■■□□□ 1.19
KDM3A-206ENST00000452034 IFT172Q9UG01 1749 aa22.48■■□□□ 1.19
KDM3A-206ENST00000452034 IQGAP1P46940 1657 aa22.46■■□□□ 1.19
KDM3A-206ENST00000452034 EID1Q9Y6B2 187 aa22.46■■□□□ 1.19
KDM3A-206ENST00000452034 NPHP4O75161 1426 aaPredicted RBP22.45■■□□□ 1.18
KDM3A-206ENST00000452034 MED14O60244 1454 aa22.44■■□□□ 1.18
KDM3A-206ENST00000452034 PPP1R15AO75807 674 aaPredicted RBP22.44■■□□□ 1.18
KDM3A-206ENST00000452034 NEUROD1Q13562 356 aa22.43■■□□□ 1.18
KDM3A-206ENST00000452034 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.4■■□□□ 1.18
KDM3A-206ENST00000452034 PLEKHG1Q9ULL1 1385 aa22.39■■□□□ 1.18
KDM3A-206ENST00000452034 NRXN3Q9Y4C0 1643 aa22.39■■□□□ 1.18
KDM3A-206ENST00000452034 RPGRIP1LQ68CZ1 1315 aa22.39■■□□□ 1.18
KDM3A-206ENST00000452034 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.17
KDM3A-206ENST00000452034 HDGFP51858 240 aaKnown RBP22.38■■□□□ 1.17
KDM3A-206ENST00000452034 BCANQ96GW7 911 aa22.36■■□□□ 1.17
KDM3A-206ENST00000452034 ADGRF5Q8IZF2 1346 aa22.35■■□□□ 1.17
KDM3A-206ENST00000452034 SETBP1Q9Y6X0 1596 aa22.34■■□□□ 1.17
KDM3A-206ENST00000452034 SLC26A8Q96RN1 970 aa22.34■■□□□ 1.17
KDM3A-206ENST00000452034 DMRT2Q9Y5R5 561 aa22.34■■□□□ 1.17
KDM3A-206ENST00000452034 MYOM2P54296 1465 aa22.34■■□□□ 1.17
KDM3A-206ENST00000452034 ADAMTS13Q76LX8 1427 aa22.33■■□□□ 1.17
KDM3A-206ENST00000452034 DCAF11Q8TEB1 546 aa22.33■■□□□ 1.17
KDM3A-206ENST00000452034 VGFO15240 615 aaPredicted RBP22.32■■□□□ 1.16
KDM3A-206ENST00000452034 KDM2AQ9Y2K7 1162 aa22.32■■□□□ 1.16
KDM3A-206ENST00000452034 NRXN1Q9ULB1 1477 aa22.3■■□□□ 1.16
KDM3A-206ENST00000452034 L3MBTL2Q969R5 705 aa22.3■■□□□ 1.16
KDM3A-206ENST00000452034 SETD1AO15047 1707 aaKnown RBP22.3■■□□□ 1.16
KDM3A-206ENST00000452034 PIK3C2GO75747 1445 aa22.29■■□□□ 1.16
KDM3A-206ENST00000452034 DIP2AQ14689 1571 aa22.29■■□□□ 1.16
KDM3A-206ENST00000452034 CLSPNQ9HAW4 1339 aa22.29■■□□□ 1.16
KDM3A-206ENST00000452034 ALKQ9UM73 1620 aa22.28■■□□□ 1.16
KDM3A-206ENST00000452034 STRCP1A6NGW2 1772 aa22.27■■□□□ 1.16
KDM3A-206ENST00000452034 TONSLQ96HA7 1378 aa22.27■■□□□ 1.16
KDM3A-206ENST00000452034 ZNF335Q9H4Z2 1342 aaPredicted RBP22.27■■□□□ 1.16
KDM3A-206ENST00000452034 ASXL1Q8IXJ9 1541 aa22.23■■□□□ 1.15
KDM3A-206ENST00000452034 TBX22Q9Y458 520 aa22.23■■□□□ 1.15
KDM3A-206ENST00000452034 METP08581 1390 aa22.23■■□□□ 1.15
KDM3A-206ENST00000452034 CHD2O14647 1828 aaKnown RBP22.22■■□□□ 1.15
KDM3A-206ENST00000452034 LAMC1P11047 1609 aa22.21■■□□□ 1.15
KDM3A-206ENST00000452034 PRAG1Q86YV5 1406 aa22.21■■□□□ 1.15
KDM3A-206ENST00000452034 PTPRUQ92729 1446 aa22.21■■□□□ 1.15
KDM3A-206ENST00000452034 NWD1Q149M9 1564 aa22.21■■□□□ 1.15
KDM3A-206ENST00000452034 LTBP4Q8N2S1 1624 aa22.2■■□□□ 1.15
KDM3A-206ENST00000452034 CFAP70Q5T0N1 1121 aa22.2■■□□□ 1.14
KDM3A-206ENST00000452034 STAC3Q96MF2 364 aa22.17■■□□□ 1.14
KDM3A-206ENST00000452034 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
KDM3A-206ENST00000452034 TMEM132EQ6IEE7 984 aa22.16■■□□□ 1.14
KDM3A-206ENST00000452034 C14orf93Q9H972 538 aaKnown RBP22.16■■□□□ 1.14
KDM3A-206ENST00000452034 PIK3R4Q99570 1358 aa22.14■■□□□ 1.14
KDM3A-206ENST00000452034 TRPM1Q7Z4N2 1603 aa22.14■■□□□ 1.14
KDM3A-206ENST00000452034 ADGRB1O14514 1584 aa22.14■■□□□ 1.13
KDM3A-206ENST00000452034 KCNA6P17658 529 aa22.14■■□□□ 1.13
KDM3A-206ENST00000452034 NBPF8Q3BBV2 869 aa22.14■■□□□ 1.13
KDM3A-206ENST00000452034 KIAA1210Q9ULL0 1709 aa22.14■■□□□ 1.13
KDM3A-206ENST00000452034 CPS1P31327 1500 aa22.12■■□□□ 1.13
KDM3A-206ENST00000452034 AMOTL2Q9Y2J4 779 aa22.12■■□□□ 1.13
KDM3A-206ENST00000452034 NKTRP30414 1462 aaKnown RBP22.1■■□□□ 1.13
KDM3A-206ENST00000452034 XIRP1Q702N8 1843 aaKnown RBP22.1■■□□□ 1.13
KDM3A-206ENST00000452034 LRRC7Q96NW7 1537 aa22.1■■□□□ 1.13
KDM3A-206ENST00000452034 YTHDC2Q9H6S0 1430 aaKnown RBP22.09■■□□□ 1.13
KDM3A-206ENST00000452034 NBPF1Q3BBV0 1214 aa22.09■■□□□ 1.13
KDM3A-206ENST00000452034 RBM33Q96EV2 1170 aaKnown RBP22.09■■□□□ 1.13
KDM3A-206ENST00000452034 STK26Q9P289 416 aa22.09■■□□□ 1.13
KDM3A-206ENST00000452034 KNDC1Q76NI1 1749 aa22.09■■□□□ 1.13
KDM3A-206ENST00000452034 LRPPRCP42704 1394 aaKnown RBP22.07■■□□□ 1.12
KDM3A-206ENST00000452034 TIMELESSQ9UNS1 1208 aa22.06■■□□□ 1.12
KDM3A-206ENST00000452034 ROBO2Q9HCK4 1378 aa22.05■■□□□ 1.12
KDM3A-206ENST00000452034 PROSER2Q86WR7 435 aaPredicted RBP22.05■■□□□ 1.12
KDM3A-206ENST00000452034 RALGAPBQ86X10 1494 aa22.04■■□□□ 1.12
KDM3A-206ENST00000452034 PTCH1Q13635 1447 aa22.04■■□□□ 1.12
KDM3A-206ENST00000452034 TMEM94Q12767 1356 aa22.03■■□□□ 1.12
KDM3A-206ENST00000452034 TECPR2O15040 1411 aa22.03■■□□□ 1.12
KDM3A-206ENST00000452034 ARHGEF28Q8N1W1 1705 aaKnown RBP22.02■■□□□ 1.12
KDM3A-206ENST00000452034 ROCK2O75116 1388 aaKnown RBP22.01■■□□□ 1.11
KDM3A-206ENST00000452034 ABCC11Q96J66 1382 aa22.01■■□□□ 1.11
KDM3A-206ENST00000452034 CERKQ8TCT0 537 aa22.01■■□□□ 1.11
KDM3A-206ENST00000452034 TRAK1Q9UPV9 953 aa22.01■■□□□ 1.11
KDM3A-206ENST00000452034 PLEKHH1Q9ULM0 1364 aa22■■□□□ 1.11
KDM3A-206ENST00000452034 NALCNQ8IZF0 1738 aa21.99■■□□□ 1.11
KDM3A-206ENST00000452034 DLC1Q96QB1 1528 aa21.99■■□□□ 1.11
KDM3A-206ENST00000452034 WAPLQ7Z5K2 1190 aa21.98■■□□□ 1.11
KDM3A-206ENST00000452034 GPRASP1Q5JY77 1395 aa21.97■■□□□ 1.11
KDM3A-206ENST00000452034 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.96■■□□□ 1.11
KDM3A-206ENST00000452034 SAFB2Q14151 953 aaKnown RBP eCLIP21.94■■□□□ 1.1
KDM3A-206ENST00000452034 C14orf37Q86TY3 774 aa21.94■■□□□ 1.1
KDM3A-206ENST00000452034 PRAM1Q96QH2 718 aa21.94■■□□□ 1.1
KDM3A-206ENST00000452034 FAM135BQ49AJ0 1406 aa21.94■■□□□ 1.1
KDM3A-206ENST00000452034 IQSEC2Q5JU85 1478 aa21.94■■□□□ 1.1
KDM3A-206ENST00000452034 CARD11Q9BXL7 1154 aa21.93■■□□□ 1.1
KDM3A-206ENST00000452034 ADGRL3Q9HAR2 1447 aa21.92■■□□□ 1.1
KDM3A-206ENST00000452034 NCOA3Q9Y6Q9 1424 aa21.9■■□□□ 1.1
KDM3A-206ENST00000452034 MSH6P52701 1360 aa21.9■■□□□ 1.1
KDM3A-206ENST00000452034 POGKQ9P215 609 aa21.9■■□□□ 1.1
KDM3A-206ENST00000452034 QRICH2Q9H0J4 1663 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms