RNA–Protein interactions for RNA: ENST00000449853.2

NBPF1-205, Transcript of NBPF member 1, humanhuman

TSL 1 (best)

Gene NBPF1, Length 2,755 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1-205ENST00000449853 TRPM1Q7Z4N2 1603 aa23.47■■□□□ 1.35
NBPF1-205ENST00000449853 GPATCH8Q9UKJ3 1502 aaKnown RBP23.47■■□□□ 1.35
NBPF1-205ENST00000449853 ITSN2Q9NZM3 1697 aa23.47■■□□□ 1.35
NBPF1-205ENST00000449853 RAPGEF6Q8TEU7 1601 aa23.46■■□□□ 1.35
NBPF1-205ENST00000449853 PDE3AQ14432 1141 aa23.46■■□□□ 1.35
NBPF1-205ENST00000449853 PANK1Q8TE04 598 aa23.46■■□□□ 1.35
NBPF1-205ENST00000449853 GPRASP1Q5JY77 1395 aa23.46■■□□□ 1.35
NBPF1-205ENST00000449853 KNSTRNQ9Y448 316 aa23.46■■□□□ 1.35
NBPF1-205ENST00000449853 CANXP27824 592 aaKnown RBP23.45■■□□□ 1.34
NBPF1-205ENST00000449853 CHMP5Q9NZZ3 219 aa23.45■■□□□ 1.34
NBPF1-205ENST00000449853 KIAA0556O60303 1618 aa23.45■■□□□ 1.34
NBPF1-205ENST00000449853 APAF1O14727 1248 aa23.44■■□□□ 1.34
NBPF1-205ENST00000449853 DISP1Q96F81 1524 aa23.44■■□□□ 1.34
NBPF1-205ENST00000449853 TROQ12816 1431 aaPredicted RBP23.43■■□□□ 1.34
NBPF1-205ENST00000449853 E9PSI1 815 aa23.43■■□□□ 1.34
NBPF1-205ENST00000449853 TRIM44Q96DX7 344 aaPredicted RBP23.43■■□□□ 1.34
NBPF1-205ENST00000449853 CLASP1Q7Z460 1538 aa23.41■■□□□ 1.34
NBPF1-205ENST00000449853 TPM2P07951 284 aa23.4■■□□□ 1.34
NBPF1-205ENST00000449853 AMER1Q5JTC6 1135 aaPredicted RBP23.39■■□□□ 1.33
NBPF1-205ENST00000449853 PDCL3Q9H2J4 239 aa23.39■■□□□ 1.33
NBPF1-205ENST00000449853 DMRT2Q9Y5R5 561 aa23.39■■□□□ 1.33
NBPF1-205ENST00000449853 CCDC144AA2RUR9 1427 aa23.38■■□□□ 1.33
NBPF1-205ENST00000449853 MAGI2Q86UL8 1455 aa23.38■■□□□ 1.33
NBPF1-205ENST00000449853 CENPJQ9HC77 1338 aaPredicted RBP23.38■■□□□ 1.33
NBPF1-205ENST00000449853 C9orf84Q5VXU9 1444 aa23.38■■□□□ 1.33
NBPF1-205ENST00000449853 PMFBP1Q8TBY8 1022 aa23.38■■□□□ 1.33
NBPF1-205ENST00000449853 PDS5BQ9NTI5 1447 aa23.37■■□□□ 1.33
NBPF1-205ENST00000449853 PRDM15P57071 1507 aaPredicted RBP23.37■■□□□ 1.33
NBPF1-205ENST00000449853 ISY1Q9ULR0 285 aaKnown RBP23.37■■□□□ 1.33
NBPF1-205ENST00000449853 PDZRN3Q9UPQ7 1066 aa23.37■■□□□ 1.33
NBPF1-205ENST00000449853 EIF4G3O43432 1585 aaKnown RBP23.37■■□□□ 1.33
NBPF1-205ENST00000449853 DDX11L8A8MPP1 907 aa23.37■■□□□ 1.33
NBPF1-205ENST00000449853 PTPRGP23470 1445 aa23.37■■□□□ 1.33
NBPF1-205ENST00000449853 NINLQ9Y2I6 1382 aa23.35■■□□□ 1.33
NBPF1-205ENST00000449853 TSPY4P0CV99 314 aa23.35■■□□□ 1.33
NBPF1-205ENST00000449853 TSPY10P0CW01 314 aa23.35■■□□□ 1.33
NBPF1-205ENST00000449853 PCDHB15Q9Y5E8 787 aa23.35■■□□□ 1.33
NBPF1-205ENST00000449853 ADCY10Q96PN6 1610 aa23.35■■□□□ 1.33
NBPF1-205ENST00000449853 C22orf23Q9BZE7 217 aa23.33■■□□□ 1.33
NBPF1-205ENST00000449853 ZMYM3Q14202 1370 aa23.33■■□□□ 1.33
NBPF1-205ENST00000449853 WDR7Q9Y4E6 1490 aa23.33■■□□□ 1.32
NBPF1-205ENST00000449853 A2MP01023 1474 aa23.32■■□□□ 1.32
NBPF1-205ENST00000449853 CDC42BPAQ5VT25 1732 aa23.32■■□□□ 1.32
NBPF1-205ENST00000449853 GAS2L3Q86XJ1 694 aa23.31■■□□□ 1.32
NBPF1-205ENST00000449853 MFAP1P55081 439 aaKnown RBP23.3■■□□□ 1.32
NBPF1-205ENST00000449853 KIAA1211Q6ZU35 1233 aa23.3■■□□□ 1.32
NBPF1-205ENST00000449853 PIK3C2GO75747 1445 aa23.3■■□□□ 1.32
NBPF1-205ENST00000449853 LAMC1P11047 1609 aa23.29■■□□□ 1.32
NBPF1-205ENST00000449853 SHANK2Q9UPX8 1470 aa23.29■■□□□ 1.32
NBPF1-205ENST00000449853 ZNF692Q9BU19 519 aaPredicted RBP23.28■■□□□ 1.32
NBPF1-205ENST00000449853 HSCBQ8IWL3 235 aa23.27■■□□□ 1.32
NBPF1-205ENST00000449853 FAM135AQ9P2D6 1515 aa23.27■■□□□ 1.32
NBPF1-205ENST00000449853 ABCC2Q92887 1545 aa23.26■■□□□ 1.31
NBPF1-205ENST00000449853 RLBP1P12271 317 aa23.26■■□□□ 1.31
NBPF1-205ENST00000449853 RWDD1Q9H446 243 aaPredicted RBP23.26■■□□□ 1.31
NBPF1-205ENST00000449853 ABCC10Q5T3U5 1492 aa23.25■■□□□ 1.31
NBPF1-205ENST00000449853 AAMPQ13685 434 aa23.25■■□□□ 1.31
NBPF1-205ENST00000449853 TNNQ9UQP3 1299 aa23.25■■□□□ 1.31
NBPF1-205ENST00000449853 RTEL1-TNFRSF6BF6WH68 1400 aa23.25■■□□□ 1.31
NBPF1-205ENST00000449853 PODXL2Q9NZ53 605 aa23.24■■□□□ 1.31
NBPF1-205ENST00000449853 PLB1Q6P1J6 1458 aa23.23■■□□□ 1.31
NBPF1-205ENST00000449853 WWC1Q8IX03 1113 aa23.23■■□□□ 1.31
NBPF1-205ENST00000449853 RARSP54136 660 aaKnown RBP23.23■■□□□ 1.31
NBPF1-205ENST00000449853 CALD1Q05682 793 aaKnown RBP23.23■■□□□ 1.31
NBPF1-205ENST00000449853 HNRNPMP52272 730 aaKnown RBP eCLIP23.22■■□□□ 1.31
NBPF1-205ENST00000449853 TNPO1Q92973 898 aaKnown RBP23.22■■□□□ 1.31
NBPF1-205ENST00000449853 PLA2R1Q13018 1463 aa23.22■■□□□ 1.31
NBPF1-205ENST00000449853 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
NBPF1-205ENST00000449853 NGEFQ8N5V2 710 aa23.21■■□□□ 1.31
NBPF1-205ENST00000449853 DDIT3P35638 169 aa23.2■■□□□ 1.3
NBPF1-205ENST00000449853 BCL2L13Q9BXK5 485 aa23.19■■□□□ 1.3
NBPF1-205ENST00000449853 RBM10P98175 930 aaKnown RBP23.19■■□□□ 1.3
NBPF1-205ENST00000449853 CCDC173Q0VFZ6 552 aa23.18■■□□□ 1.3
NBPF1-205ENST00000449853 GBP4Q96PP9 640 aa23.18■■□□□ 1.3
NBPF1-205ENST00000449853 EIF2AK4Q9P2K8 1649 aaKnown RBP23.18■■□□□ 1.3
NBPF1-205ENST00000449853 PLXNC1O60486 1568 aa23.18■■□□□ 1.3
NBPF1-205ENST00000449853 ZSCAN30Q86W11 494 aa23.18■■□□□ 1.3
NBPF1-205ENST00000449853 CCDC141Q6ZP82 1450 aa23.17■■□□□ 1.3
NBPF1-205ENST00000449853 OFD1O75665 1012 aa23.17■■□□□ 1.3
NBPF1-205ENST00000449853 SKOR2Q2VWA4 1001 aaPredicted RBP23.17■■□□□ 1.3
NBPF1-205ENST00000449853 CDCA8Q53HL2 280 aa23.17■■□□□ 1.3
NBPF1-205ENST00000449853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.17■■□□□ 1.31e-8■■□□□ 13.1
NBPF1-205ENST00000449853 PRDM4Q9UKN5 801 aa23.17■■□□□ 1.3
NBPF1-205ENST00000449853 NUP160Q12769 1436 aa23.17■■□□□ 1.3
NBPF1-205ENST00000449853 NEUROD2Q15784 382 aa23.16■■□□□ 1.3
NBPF1-205ENST00000449853 NCOA3Q9Y6Q9 1424 aa23.16■■□□□ 1.3
NBPF1-205ENST00000449853 RIPK4P57078 832 aa23.15■■□□□ 1.3
NBPF1-205ENST00000449853 NASPP49321 788 aaPredicted RBP23.14■■□□□ 1.3
NBPF1-205ENST00000449853 PPP1R9BQ96SB3 815 aa23.14■■□□□ 1.3
NBPF1-205ENST00000449853 NPC1L1Q9UHC9 1359 aa23.14■■□□□ 1.3
NBPF1-205ENST00000449853 MSNP26038 577 aaKnown RBP23.13■■□□□ 1.29
NBPF1-205ENST00000449853 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.13■■□□□ 1.29
NBPF1-205ENST00000449853 PLEKHD1A6NEE1 506 aa23.12■■□□□ 1.29
NBPF1-205ENST00000449853 RAB3GAP1Q15042 981 aa23.12■■□□□ 1.29
NBPF1-205ENST00000449853 SMC5Q8IY18 1101 aa23.12■■□□□ 1.29
NBPF1-205ENST00000449853 ANP32BQ92688 251 aaKnown RBP23.12■■□□□ 1.29
NBPF1-205ENST00000449853 SYNMO15061 1565 aa23.12■■□□□ 1.29
NBPF1-205ENST00000449853 FAM13BQ9NYF5 915 aa23.12■■□□□ 1.29
NBPF1-205ENST00000449853 CIZ1Q9ULV3 898 aaPredicted RBP23.12■■□□□ 1.29
NBPF1-205ENST00000449853 MYO5CQ9NQX4 1742 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms