RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SHPRHQ149N8 1683 aa20.28■□□□□ 0.84
AC004540.1-204ENST00000449537 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.84
AC004540.1-204ENST00000449537 MROH1Q8NDA8 1641 aa20.27■□□□□ 0.84
AC004540.1-204ENST00000449537 EIF2AK4Q9P2K8 1649 aaKnown RBP20.27■□□□□ 0.84
AC004540.1-204ENST00000449537 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.84
AC004540.1-204ENST00000449537 ATF3P18847 181 aa20.26■□□□□ 0.83
AC004540.1-204ENST00000449537 RGS12O14924 1447 aa20.26■□□□□ 0.83
AC004540.1-204ENST00000449537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.83
AC004540.1-204ENST00000449537 C19orf44Q9H6X5 657 aa20.24■□□□□ 0.83
AC004540.1-204ENST00000449537 NCOA3Q9Y6Q9 1424 aa20.24■□□□□ 0.83
AC004540.1-204ENST00000449537 AHDC1Q5TGY3 1603 aaPredicted RBP20.24■□□□□ 0.83
AC004540.1-204ENST00000449537 KDM5AP29375 1690 aaKnown RBP20.23■□□□□ 0.83
AC004540.1-204ENST00000449537 NGLY1Q96IV0 654 aa20.23■□□□□ 0.83
AC004540.1-204ENST00000449537 ATAD2Q6PL18 1390 aa20.22■□□□□ 0.83
AC004540.1-204ENST00000449537 C8orf37Q96NL8 207 aa20.22■□□□□ 0.83
AC004540.1-204ENST00000449537 MAST1Q9Y2H9 1570 aa20.2■□□□□ 0.82
AC004540.1-204ENST00000449537 BRINP3Q76B58 766 aa20.19■□□□□ 0.82
AC004540.1-204ENST00000449537 CHD2O14647 1828 aaKnown RBP20.18■□□□□ 0.82
AC004540.1-204ENST00000449537 SETBP1Q9Y6X0 1596 aa20.18■□□□□ 0.82
AC004540.1-204ENST00000449537 HDGFP51858 240 aaKnown RBP20.18■□□□□ 0.82
AC004540.1-204ENST00000449537 TBX22Q9Y458 520 aa20.18■□□□□ 0.82
AC004540.1-204ENST00000449537 DUOX2Q9NRD8 1548 aa20.17■□□□□ 0.82
AC004540.1-204ENST00000449537 LRRC59Q96AG4 307 aaKnown RBP20.17■□□□□ 0.82
AC004540.1-204ENST00000449537 KANK1Q14678 1352 aa20.16■□□□□ 0.82
AC004540.1-204ENST00000449537 PPP1R15AO75807 674 aaPredicted RBP20.15■□□□□ 0.82
AC004540.1-204ENST00000449537 SLC52A1Q9NWF4 448 aa20.15■□□□□ 0.82
AC004540.1-204ENST00000449537 DIP2AQ14689 1571 aa20.14■□□□□ 0.81
AC004540.1-204ENST00000449537 CCDC125Q86Z20 511 aa20.14■□□□□ 0.81
AC004540.1-204ENST00000449537 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.13■□□□□ 0.81
AC004540.1-204ENST00000449537 PLEKHG1Q9ULL1 1385 aa20.13■□□□□ 0.81
AC004540.1-204ENST00000449537 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
AC004540.1-204ENST00000449537 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
AC004540.1-204ENST00000449537 ADGRB3O60242 1522 aa20.09■□□□□ 0.81
AC004540.1-204ENST00000449537 KIF15Q9NS87 1388 aa20.08■□□□□ 0.81
AC004540.1-204ENST00000449537 ADAMTS2O95450 1211 aa20.08■□□□□ 0.81
AC004540.1-204ENST00000449537 USP21Q9UK80 565 aa20.07■□□□□ 0.8
AC004540.1-204ENST00000449537 TRPC5Q9UL62 973 aaPredicted RBP20.07■□□□□ 0.8
AC004540.1-204ENST00000449537 NOS1P29475 1434 aa20.07■□□□□ 0.8
AC004540.1-204ENST00000449537 ERBINQ96RT1 1412 aa20.07■□□□□ 0.8
AC004540.1-204ENST00000449537 ZFYVE9O95405 1425 aa20.05■□□□□ 0.8
AC004540.1-204ENST00000449537 RIMS2Q9UQ26 1411 aa20.05■□□□□ 0.8
AC004540.1-204ENST00000449537 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.04■□□□□ 0.8
AC004540.1-204ENST00000449537 MYOM3Q5VTT5 1437 aa20.03■□□□□ 0.8
AC004540.1-204ENST00000449537 AMOTL2Q9Y2J4 779 aa20.03■□□□□ 0.8
AC004540.1-204ENST00000449537 PNPLA6Q8IY17 1366 aa20.03■□□□□ 0.8
AC004540.1-204ENST00000449537 PIK3R4Q99570 1358 aa20.03■□□□□ 0.8
AC004540.1-204ENST00000449537 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
AC004540.1-204ENST00000449537 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.79
AC004540.1-204ENST00000449537 DDX17Q92841 729 aaKnown RBP20.01■□□□□ 0.79
AC004540.1-204ENST00000449537 FNBP4Q8N3X1 1017 aaPredicted RBP19.99■□□□□ 0.79
AC004540.1-204ENST00000449537 DCCP43146 1447 aa19.99■□□□□ 0.79
AC004540.1-204ENST00000449537 ADAMTS13Q76LX8 1427 aa19.99■□□□□ 0.79
AC004540.1-204ENST00000449537 CHGAP10645 457 aaKnown RBP19.97■□□□□ 0.79
AC004540.1-204ENST00000449537 NHSL1Q5SYE7 1610 aa19.97■□□□□ 0.79
AC004540.1-204ENST00000449537 MST1RQ04912 1400 aa19.96■□□□□ 0.79
AC004540.1-204ENST00000449537 MYO5BQ9ULV0 1848 aa19.95■□□□□ 0.78
AC004540.1-204ENST00000449537 ATRNO75882 1429 aa19.93■□□□□ 0.78
AC004540.1-204ENST00000449537 ABCC5O15440 1437 aa19.93■□□□□ 0.78
AC004540.1-204ENST00000449537 EP400Q96L91 3159 aa19.92■□□□□ 0.78
AC004540.1-204ENST00000449537 DEFB132Q7Z7B7 95 aa19.91■□□□□ 0.78
AC004540.1-204ENST00000449537 PTPRUQ92729 1446 aa19.91■□□□□ 0.78
AC004540.1-204ENST00000449537 SF3B2Q13435 895 aaKnown RBP19.9■□□□□ 0.78
AC004540.1-204ENST00000449537 TMEM131LA2VDJ0 1609 aa19.9■□□□□ 0.78
AC004540.1-204ENST00000449537 TRPM2O94759 1503 aa19.89■□□□□ 0.77
AC004540.1-204ENST00000449537 BLMP54132 1417 aaPredicted RBP19.89■□□□□ 0.77
AC004540.1-204ENST00000449537 PTCH1Q13635 1447 aa19.89■□□□□ 0.77
AC004540.1-204ENST00000449537 GCC2Q8IWJ2 1684 aa19.88■□□□□ 0.77
AC004540.1-204ENST00000449537 RPRD2Q5VT52 1461 aaKnown RBP19.88■□□□□ 0.77
AC004540.1-204ENST00000449537 GJD4Q96KN9 370 aaPredicted RBP19.88■□□□□ 0.77
AC004540.1-204ENST00000449537 CHIC2Q9UKJ5 165 aa19.88■□□□□ 0.77
AC004540.1-204ENST00000449537 LRP5O75197 1615 aa19.87■□□□□ 0.77
AC004540.1-204ENST00000449537 ANKRD30AQ9BXX3 1397 aa19.87■□□□□ 0.77
AC004540.1-204ENST00000449537 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
AC004540.1-204ENST00000449537 SOS2Q07890 1332 aaPredicted RBP19.85■□□□□ 0.77
AC004540.1-204ENST00000449537 CROCC2H7BZ55 1655 aa19.82■□□□□ 0.76
AC004540.1-204ENST00000449537 BCL9LQ86UU0 1499 aa19.82■□□□□ 0.76
AC004540.1-204ENST00000449537 HRCP23327 699 aa19.82■□□□□ 0.76
AC004540.1-204ENST00000449537 DAPK1P53355 1430 aa19.82■□□□□ 0.76
AC004540.1-204ENST00000449537 PSDA5PKW4 1024 aaPredicted RBP19.81■□□□□ 0.76
AC004540.1-204ENST00000449537 ADGRL3Q9HAR2 1447 aa19.79■□□□□ 0.76
AC004540.1-204ENST00000449537 ORAI2Q96SN7 254 aa19.79■□□□□ 0.76
AC004540.1-204ENST00000449537 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
AC004540.1-204ENST00000449537 YY1P25490 414 aa19.77■□□□□ 0.76
AC004540.1-204ENST00000449537 XRN1Q8IZH2 1706 aaKnown RBP19.76■□□□□ 0.75
AC004540.1-204ENST00000449537 UNC13BO14795 1591 aa19.74■□□□□ 0.75
AC004540.1-204ENST00000449537 METP08581 1390 aa19.74■□□□□ 0.75
AC004540.1-204ENST00000449537 UNC5CLQ8IV45 518 aa19.74■□□□□ 0.75
AC004540.1-204ENST00000449537 LAMC1P11047 1609 aa19.73■□□□□ 0.75
AC004540.1-204ENST00000449537 PTPN23Q9H3S7 1636 aa19.73■□□□□ 0.75
AC004540.1-204ENST00000449537 BAG6P46379 1132 aa19.72■□□□□ 0.75
AC004540.1-204ENST00000449537 SEPT12Q8IYM1 358 aa19.72■□□□□ 0.75
AC004540.1-204ENST00000449537 MYOM2P54296 1465 aa19.71■□□□□ 0.75
AC004540.1-204ENST00000449537 COL22A1Q8NFW1 1626 aaPredicted RBP19.7■□□□□ 0.74
AC004540.1-204ENST00000449537 RALGAPBQ86X10 1494 aa19.7■□□□□ 0.74
AC004540.1-204ENST00000449537 ANKRD50Q9ULJ7 1429 aa19.68■□□□□ 0.74
AC004540.1-204ENST00000449537 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
AC004540.1-204ENST00000449537 KRT27Q7Z3Y8 459 aa19.67■□□□□ 0.74
AC004540.1-204ENST00000449537 NPHP3Q7Z494 1330 aa19.67■□□□□ 0.74
AC004540.1-204ENST00000449537 BRWD3Q6RI45 1802 aa19.67■□□□□ 0.74
AC004540.1-204ENST00000449537 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms