RNA–Protein interactions for RNA: ENST00000449407.6

SORBS2-231, Transcript of sorbin and SH3 domain containing 2, human

TSL 1 (best) BASIC

Gene SORBS2, Length 3,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS2-231	ENST00000449407	ANKRD30A	Q9BXX3	1397 aa		13.1	□□□□□ -0.31
SORBS2-231	ENST00000449407	MSN	P26038	577 aa	Known RBP	13.1	□□□□□ -0.31
SORBS2-231	ENST00000449407	TOPBP1	Q92547	1522 aa		13.1	□□□□□ -0.31
SORBS2-231	ENST00000449407		E9PSI1	815 aa		13.1	□□□□□ -0.31
SORBS2-231	ENST00000449407	HSP90AB1	P08238	724 aa	Known RBP	13.1	□□□□□ -0.31
SORBS2-231	ENST00000449407	TNPO1	Q92973	898 aa	Known RBP	13.1	□□□□□ -0.31
SORBS2-231	ENST00000449407	NES	P48681	1621 aa		13.1	□□□□□ -0.31
SORBS2-231	ENST00000449407	CAMSAP2	Q08AD1	1489 aa		13.1	□□□□□ -0.31
SORBS2-231	ENST00000449407	DDX11L8	A8MPP1	907 aa		13.09	□□□□□ -0.31
SORBS2-231	ENST00000449407	UHRF1BP1	Q6BDS2	1440 aa		13.09	□□□□□ -0.31
SORBS2-231	ENST00000449407	SAMD9	Q5K651	1589 aa		13.09	□□□□□ -0.31
SORBS2-231	ENST00000449407	TPM2	P07951	284 aa		13.08	□□□□□ -0.32
SORBS2-231	ENST00000449407	PMFBP1	Q8TBY8	1022 aa		13.08	□□□□□ -0.32
SORBS2-231	ENST00000449407	ANP32B	Q92688	251 aa	Known RBP	13.08	□□□□□ -0.32
SORBS2-231	ENST00000449407	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.08	□□□□□ -0.32
SORBS2-231	ENST00000449407	NKTR	P30414	1462 aa	Known RBP	13.08	□□□□□ -0.32
SORBS2-231	ENST00000449407	GAPVD1	Q14C86	1478 aa		13.08	□□□□□ -0.32
SORBS2-231	ENST00000449407	NLRP1	Q9C000	1473 aa		13.08	□□□□□ -0.32
SORBS2-231	ENST00000449407	NASP	P49321	788 aa	Predicted RBP	13.07	□□□□□ -0.32
SORBS2-231	ENST00000449407	XPC	Q01831	940 aa	Predicted RBP	13.07	□□□□□ -0.32
SORBS2-231	ENST00000449407	PDE3A	Q14432	1141 aa		13.07	□□□□□ -0.32
SORBS2-231	ENST00000449407	PDS5B	Q9NTI5	1447 aa		13.06	□□□□□ -0.32
SORBS2-231	ENST00000449407	PRDM2	Q13029	1718 aa		13.06	□□□□□ -0.32
SORBS2-231	ENST00000449407	RWDD1	Q9H446	243 aa	Predicted RBP	13.06	□□□□□ -0.32
SORBS2-231	ENST00000449407	ERBIN	Q96RT1	1412 aa		13.06	□□□□□ -0.32
SORBS2-231	ENST00000449407	PLEKHH2	Q8IVE3	1493 aa		13.05	□□□□□ -0.32
SORBS2-231	ENST00000449407	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.05	□□□□□ -0.32
SORBS2-231	ENST00000449407	FTSJ3	Q8IY81	847 aa	Known RBP	13.05	□□□□□ -0.32
SORBS2-231	ENST00000449407	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.05	□□□□□ -0.32
SORBS2-231	ENST00000449407	RIPK4	P57078	832 aa		13.05	□□□□□ -0.32
SORBS2-231	ENST00000449407	DDX49	Q9Y6V7	483 aa	Known RBP	13.05	□□□□□ -0.32
SORBS2-231	ENST00000449407	CUL7	Q14999	1698 aa		13.04	□□□□□ -0.32
SORBS2-231	ENST00000449407	WWC1	Q8IX03	1113 aa		13.04	□□□□□ -0.32
SORBS2-231	ENST00000449407	CCDC144A	A2RUR9	1427 aa		13.04	□□□□□ -0.32
SORBS2-231	ENST00000449407	TRMT2A	Q8IZ69	625 aa	Known RBP	13.04	□□□□□ -0.32
SORBS2-231	ENST00000449407	MPND	Q8N594	471 aa		13.04	□□□□□ -0.32
SORBS2-231	ENST00000449407	DNMT1	P26358	1616 aa	Known RBP	13.04	□□□□□ -0.32
SORBS2-231	ENST00000449407	RARS	P54136	660 aa	Known RBP	13.03	□□□□□ -0.32
SORBS2-231	ENST00000449407	GBP4	Q96PP9	640 aa		13.03	□□□□□ -0.32
SORBS2-231	ENST00000449407	RBM42	Q9BTD8	480 aa	Known RBP	13.03	□□□□□ -0.32
SORBS2-231	ENST00000449407	CC2D2A	Q9P2K1	1620 aa		13.03	□□□□□ -0.32
SORBS2-231	ENST00000449407	ZSCAN30	Q86W11	494 aa		13.02	□□□□□ -0.32
SORBS2-231	ENST00000449407	SSFA2	P28290	1259 aa		13.02	□□□□□ -0.33
SORBS2-231	ENST00000449407	LNPK	Q9C0E8	428 aa		13.02	□□□□□ -0.33
SORBS2-231	ENST00000449407	PRDM4	Q9UKN5	801 aa		13.02	□□□□□ -0.33
SORBS2-231	ENST00000449407	UQCRHL	A0A096LP55	91 aa		13.01	□□□□□ -0.33
SORBS2-231	ENST00000449407	CD2BP2	O95400	341 aa	Known RBP	13.01	□□□□□ -0.33
SORBS2-231	ENST00000449407	UQCRH	P07919	91 aa		13.01	□□□□□ -0.33
SORBS2-231	ENST00000449407	ITPRIP	Q8IWB1	547 aa		13.01	□□□□□ -0.33
SORBS2-231	ENST00000449407	PRAG1	Q86YV5	1406 aa		13.01	□□□□□ -0.33
SORBS2-231	ENST00000449407	MAGI2	Q86UL8	1455 aa		13.01	□□□□□ -0.33
SORBS2-231	ENST00000449407	DNMBP	Q6XZF7	1577 aa		13	□□□□□ -0.33
SORBS2-231	ENST00000449407	FBLN2	P98095	1184 aa		13	□□□□□ -0.33
SORBS2-231	ENST00000449407	TPRN	Q4KMQ1	711 aa		13	□□□□□ -0.33
SORBS2-231	ENST00000449407	ZNF692	Q9BU19	519 aa	Predicted RBP	13	□□□□□ -0.33
SORBS2-231	ENST00000449407	JARID2	Q92833	1246 aa	Predicted RBP	13	□□□□□ -0.33
SORBS2-231	ENST00000449407	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13	□□□□□ -0.33
SORBS2-231	ENST00000449407	CAVIN1	Q6NZI2	390 aa	Known RBP	12.99	□□□□□ -0.33
SORBS2-231	ENST00000449407	CALD1	Q05682	793 aa	Known RBP	12.99	□□□□□ -0.33
SORBS2-231	ENST00000449407	CCDC173	Q0VFZ6	552 aa		12.99	□□□□□ -0.33
SORBS2-231	ENST00000449407	OFD1	O75665	1012 aa		12.99	□□□□□ -0.33
SORBS2-231	ENST00000449407	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.99	□□□□□ -0.33
SORBS2-231	ENST00000449407	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.99	□□□□□ -0.33
SORBS2-231	ENST00000449407	MCTP1	Q6DN14	999 aa		12.98	□□□□□ -0.33
SORBS2-231	ENST00000449407	TSR2	Q969E8	191 aa	Known RBP	12.98	□□□□□ -0.33
SORBS2-231	ENST00000449407	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.98	□□□□□ -0.33
SORBS2-231	ENST00000449407	TCP11L2	Q8N4U5	519 aa		12.98	□□□□□ -0.33
SORBS2-231	ENST00000449407	TSC1	Q92574	1164 aa		12.98	□□□□□ -0.33
SORBS2-231	ENST00000449407	CHAMP1	Q96JM3	812 aa		12.97	□□□□□ -0.33
SORBS2-231	ENST00000449407		E9PCH4	1651 aa		12.97	□□□□□ -0.33
SORBS2-231	ENST00000449407	GOLGA6L22	H0YM25	854 aa		12.97	□□□□□ -0.33
SORBS2-231	ENST00000449407	RNF214	Q8ND24	703 aa		12.97	□□□□□ -0.33
SORBS2-231	ENST00000449407	KIF21A	Q7Z4S6	1674 aa		12.96	□□□□□ -0.33
SORBS2-231	ENST00000449407	FAM177B	A6PVY3	158 aa		12.96	□□□□□ -0.34
SORBS2-231	ENST00000449407	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.96	□□□□□ -0.34
SORBS2-231	ENST00000449407	SMC4	Q9NTJ3	1288 aa		12.96	□□□□□ -0.34
SORBS2-231	ENST00000449407	C9orf84	Q5VXU9	1444 aa		12.95	□□□□□ -0.34
SORBS2-231	ENST00000449407	MVP	Q14764	893 aa	Known RBP	12.95	□□□□□ -0.34
SORBS2-231	ENST00000449407	DZIP1L	Q8IYY4	767 aa	Known RBP	12.95	□□□□□ -0.34
SORBS2-231	ENST00000449407	RBM27	Q9P2N5	1060 aa	Known RBP	12.95	□□□□□ -0.34
SORBS2-231	ENST00000449407	WDR62	O43379	1518 aa		12.95	□□□□□ -0.34
SORBS2-231	ENST00000449407	PLEKHD1	A6NEE1	506 aa		12.94	□□□□□ -0.34
SORBS2-231	ENST00000449407	RAB3GAP1	Q15042	981 aa		12.94	□□□□□ -0.34
SORBS2-231	ENST00000449407	GPATCH8	Q9UKJ3	1502 aa	Known RBP	12.94	□□□□□ -0.34
SORBS2-231	ENST00000449407	ARHGEF12	Q9NZN5	1544 aa		12.94	□□□□□ -0.34
SORBS2-231	ENST00000449407	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.94	□□□□□ -0.34
SORBS2-231	ENST00000449407	GAS2L2	Q8NHY3	880 aa		12.94	□□□□□ -0.34
SORBS2-231	ENST00000449407	LAMC3	Q9Y6N6	1575 aa		12.94	□□□□□ -0.34
SORBS2-231	ENST00000449407	NUP153	P49790	1475 aa	Known RBP	12.94	□□□□□ -0.34
SORBS2-231	ENST00000449407	SENP3	Q9H4L4	574 aa	Predicted RBP	12.94	□□□□□ -0.34
SORBS2-231	ENST00000449407	ISY1	Q9ULR0	285 aa	Known RBP	12.94	□□□□□ -0.34
SORBS2-231	ENST00000449407	URB2	Q14146	1524 aa	Known RBP	12.93	□□□□□ -0.34
SORBS2-231	ENST00000449407	INSR	P06213	1382 aa		12.92	□□□□□ -0.34
SORBS2-231	ENST00000449407	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.92	□□□□□ -0.34
SORBS2-231	ENST00000449407	ZKSCAN2	Q63HK3	967 aa		12.92	□□□□□ -0.34
SORBS2-231	ENST00000449407	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.92	□□□□□ -0.34
SORBS2-231	ENST00000449407	RBSN	Q9H1K0	784 aa		12.92	□□□□□ -0.34
SORBS2-231	ENST00000449407	PTMA	P06454	111 aa	Known RBP	12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	PRIM1	P49642	420 aa	Known RBP	12.91	□□□□□ -0.34
SORBS2-231	ENST00000449407	AAMP	Q13685	434 aa		12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms