RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 KCNA6P17658 529 aa21.1■□□□□ 0.97
RTFDC1-204ENST00000449062 STRCP1A6NGW2 1772 aa21.1■□□□□ 0.97
RTFDC1-204ENST00000449062 LRRC7Q96NW7 1537 aa21.09■□□□□ 0.97
RTFDC1-204ENST00000449062 TBX22Q9Y458 520 aa21.08■□□□□ 0.97
RTFDC1-204ENST00000449062 MYO5BQ9ULV0 1848 aa21.08■□□□□ 0.96
RTFDC1-204ENST00000449062 NUTM2DQ5VT03 806 aaPredicted RBP21.07■□□□□ 0.96
RTFDC1-204ENST00000449062 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
RTFDC1-204ENST00000449062 MPHOSPH9Q99550 1183 aa21.06■□□□□ 0.96
RTFDC1-204ENST00000449062 PPP1R15AO75807 674 aaPredicted RBP21.04■□□□□ 0.96
RTFDC1-204ENST00000449062 FOXD1Q16676 465 aa21.04■□□□□ 0.96
RTFDC1-204ENST00000449062 SPHKAPQ2M3C7 1700 aa21.04■□□□□ 0.96
RTFDC1-204ENST00000449062 TRPM2O94759 1503 aa21.04■□□□□ 0.96
RTFDC1-204ENST00000449062 ADAMTS13Q76LX8 1427 aa21.04■□□□□ 0.96
RTFDC1-204ENST00000449062 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
RTFDC1-204ENST00000449062 TOM1O60784 492 aa21.02■□□□□ 0.96
RTFDC1-204ENST00000449062 BCANQ96GW7 911 aa21.02■□□□□ 0.96
RTFDC1-204ENST00000449062 ACIN1Q9UKV3 1341 aaKnown RBP21.02■□□□□ 0.95
RTFDC1-204ENST00000449062 CLTCL1P53675 1640 aa21■□□□□ 0.95
RTFDC1-204ENST00000449062 ALKQ9UM73 1620 aa21■□□□□ 0.95
RTFDC1-204ENST00000449062 HRCP23327 699 aa20.98■□□□□ 0.95
RTFDC1-204ENST00000449062 ZNF326Q5BKZ1 582 aaKnown RBP20.98■□□□□ 0.95
RTFDC1-204ENST00000449062 RAB3GAP2Q9H2M9 1393 aa20.97■□□□□ 0.95
RTFDC1-204ENST00000449062 PROSER2Q86WR7 435 aaPredicted RBP20.97■□□□□ 0.95
RTFDC1-204ENST00000449062 TMEM94Q12767 1356 aa20.97■□□□□ 0.95
RTFDC1-204ENST00000449062 PIK3R4Q99570 1358 aa20.95■□□□□ 0.94
RTFDC1-204ENST00000449062 PIP4K2BP78356 416 aa20.94■□□□□ 0.94
RTFDC1-204ENST00000449062 RBM33Q96EV2 1170 aaKnown RBP20.94■□□□□ 0.94
RTFDC1-204ENST00000449062 RPGRIP1LQ68CZ1 1315 aa20.94■□□□□ 0.94
RTFDC1-204ENST00000449062 NWD1Q149M9 1564 aa20.93■□□□□ 0.94
RTFDC1-204ENST00000449062 NEXMIFQ5QGS0 1516 aa20.92■□□□□ 0.94
RTFDC1-204ENST00000449062 XIRP1Q702N8 1843 aaKnown RBP20.92■□□□□ 0.94
RTFDC1-204ENST00000449062 NKTRP30414 1462 aaKnown RBP20.91■□□□□ 0.94
RTFDC1-204ENST00000449062 PTPRUQ92729 1446 aa20.91■□□□□ 0.94
RTFDC1-204ENST00000449062 CHD2O14647 1828 aaKnown RBP20.9■□□□□ 0.94
RTFDC1-204ENST00000449062 VGFO15240 615 aaPredicted RBP20.9■□□□□ 0.94
RTFDC1-204ENST00000449062 HSPA1LP34931 641 aa20.9■□□□□ 0.94
RTFDC1-204ENST00000449062 AMOTL2Q9Y2J4 779 aa20.9■□□□□ 0.94
RTFDC1-204ENST00000449062 SPATA31E1Q6ZUB1 1445 aa20.89■□□□□ 0.94
RTFDC1-204ENST00000449062 SETBP1Q9Y6X0 1596 aa20.89■□□□□ 0.93
RTFDC1-204ENST00000449062 METP08581 1390 aa20.88■□□□□ 0.93
RTFDC1-204ENST00000449062 NRXN3Q9Y4C0 1643 aa20.88■□□□□ 0.93
RTFDC1-204ENST00000449062 DIP2AQ14689 1571 aa20.88■□□□□ 0.93
RTFDC1-204ENST00000449062 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
RTFDC1-204ENST00000449062 SCAF1Q9H7N4 1312 aaKnown RBP20.86■□□□□ 0.93
RTFDC1-204ENST00000449062 KIF1BO60333 1816 aa20.86■□□□□ 0.93
RTFDC1-204ENST00000449062 NCOA3Q9Y6Q9 1424 aa20.86■□□□□ 0.93
RTFDC1-204ENST00000449062 RGL3Q3MIN7 710 aa20.84■□□□□ 0.93
RTFDC1-204ENST00000449062 ANKRD30BQ9BXX2 1392 aa20.83■□□□□ 0.92
RTFDC1-204ENST00000449062 FAM135BQ49AJ0 1406 aa20.82■□□□□ 0.92
RTFDC1-204ENST00000449062 ADGRF5Q8IZF2 1346 aa20.81■□□□□ 0.92
RTFDC1-204ENST00000449062 C19orf44Q9H6X5 657 aa20.81■□□□□ 0.92
RTFDC1-204ENST00000449062 SLAIN2Q9P270 581 aa20.8■□□□□ 0.92
RTFDC1-204ENST00000449062 MSH6P52701 1360 aa20.79■□□□□ 0.92
RTFDC1-204ENST00000449062 XRN1Q8IZH2 1706 aaKnown RBP20.75■□□□□ 0.91
RTFDC1-204ENST00000449062 PPLO60437 1756 aa20.75■□□□□ 0.91
RTFDC1-204ENST00000449062 CADPS2Q86UW7 1296 aa20.72■□□□□ 0.91
RTFDC1-204ENST00000449062 PRAG1Q86YV5 1406 aa20.71■□□□□ 0.91
RTFDC1-204ENST00000449062 SETD1AO15047 1707 aaKnown RBP20.71■□□□□ 0.91
RTFDC1-204ENST00000449062 C14orf37Q86TY3 774 aa20.71■□□□□ 0.91
RTFDC1-204ENST00000449062 ROBO2Q9HCK4 1378 aa20.71■□□□□ 0.91
RTFDC1-204ENST00000449062 C14orf93Q9H972 538 aaKnown RBP20.7■□□□□ 0.9
RTFDC1-204ENST00000449062 ATF3P18847 181 aa20.69■□□□□ 0.9
RTFDC1-204ENST00000449062 PIK3C2GO75747 1445 aa20.69■□□□□ 0.9
RTFDC1-204ENST00000449062 NRXN1Q9ULB1 1477 aa20.68■□□□□ 0.9
RTFDC1-204ENST00000449062 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.67■□□□□ 0.9
RTFDC1-204ENST00000449062 DISP3Q9P2K9 1392 aa20.67■□□□□ 0.9
RTFDC1-204ENST00000449062 PTCH1Q13635 1447 aa20.67■□□□□ 0.9
RTFDC1-204ENST00000449062 IFT172Q9UG01 1749 aa20.67■□□□□ 0.9
RTFDC1-204ENST00000449062 TMEM132EQ6IEE7 984 aa20.66■□□□□ 0.9
RTFDC1-204ENST00000449062 DCCP43146 1447 aa20.66■□□□□ 0.9
RTFDC1-204ENST00000449062 ABCC11Q96J66 1382 aa20.65■□□□□ 0.9
RTFDC1-204ENST00000449062 ADGRL3Q9HAR2 1447 aa20.64■□□□□ 0.89
RTFDC1-204ENST00000449062 LRPPRCP42704 1394 aaKnown RBP20.64■□□□□ 0.89
RTFDC1-204ENST00000449062 CFAP70Q5T0N1 1121 aa20.64■□□□□ 0.89
RTFDC1-204ENST00000449062 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.89
RTFDC1-204ENST00000449062 DHX57Q6P158 1386 aaKnown RBP20.63■□□□□ 0.89
RTFDC1-204ENST00000449062 BRINP3Q76B58 766 aa20.63■□□□□ 0.89
RTFDC1-204ENST00000449062 MYOM2P54296 1465 aa20.62■□□□□ 0.89
RTFDC1-204ENST00000449062 TECPR2O15040 1411 aa20.62■□□□□ 0.89
RTFDC1-204ENST00000449062 SIRT1Q96EB6 747 aa20.62■□□□□ 0.89
RTFDC1-204ENST00000449062 STAC3Q96MF2 364 aa20.62■□□□□ 0.89
RTFDC1-204ENST00000449062 MST1RQ04912 1400 aa20.61■□□□□ 0.89
RTFDC1-204ENST00000449062 STK26Q9P289 416 aa20.61■□□□□ 0.89
RTFDC1-204ENST00000449062 ASXL1Q8IXJ9 1541 aa20.61■□□□□ 0.89
RTFDC1-204ENST00000449062 ILDR2Q71H61 639 aa20.6■□□□□ 0.89
RTFDC1-204ENST00000449062 WAPLQ7Z5K2 1190 aa20.6■□□□□ 0.89
RTFDC1-204ENST00000449062 DCAF11Q8TEB1 546 aa20.6■□□□□ 0.89
RTFDC1-204ENST00000449062 KDM2AQ9Y2K7 1162 aa20.58■□□□□ 0.89
RTFDC1-204ENST00000449062 YTHDC2Q9H6S0 1430 aaKnown RBP20.58■□□□□ 0.88
RTFDC1-204ENST00000449062 PLEKHH1Q9ULM0 1364 aa20.55■□□□□ 0.88
RTFDC1-204ENST00000449062 MED1Q15648 1581 aaPredicted RBP20.54■□□□□ 0.88
RTFDC1-204ENST00000449062 NALCNQ8IZF0 1738 aa20.53■□□□□ 0.88
RTFDC1-204ENST00000449062 C1orf167Q5SNV9 1468 aa20.53■□□□□ 0.88
RTFDC1-204ENST00000449062 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
RTFDC1-204ENST00000449062 AHDC1Q5TGY3 1603 aaPredicted RBP20.52■□□□□ 0.88
RTFDC1-204ENST00000449062 TRIM26Q12899 539 aaPredicted RBP20.51■□□□□ 0.87
RTFDC1-204ENST00000449062 JCADQ9P266 1359 aa20.5■□□□□ 0.87
RTFDC1-204ENST00000449062 RGS17Q9UGC6 210 aaPredicted RBP20.5■□□□□ 0.87
RTFDC1-204ENST00000449062 ADGRB1O14514 1584 aa20.5■□□□□ 0.87
RTFDC1-204ENST00000449062 COL16A1Q07092 1604 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms