RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 FOXD1Q16676 465 aa7.53□□□□□ -1.2
PCDH15-219ENST00000448885 ZNF592Q92610 1267 aa7.53□□□□□ -1.2
PCDH15-219ENST00000448885 DHX16O60231 1041 aaKnown RBP7.53□□□□□ -1.2
PCDH15-219ENST00000448885 CLUAP1Q96AJ1 413 aa7.53□□□□□ -1.2
PCDH15-219ENST00000448885 COG3Q96JB2 828 aa7.53□□□□□ -1.2
PCDH15-219ENST00000448885 DDX49Q9Y6V7 483 aaKnown RBP7.53□□□□□ -1.2
PCDH15-219ENST00000448885 MYBBP1AQ9BQG0 1328 aaKnown RBP7.53□□□□□ -1.2
PCDH15-219ENST00000448885 MEX3CQ5U5Q3 659 aaKnown RBP7.53□□□□□ -1.2
PCDH15-219ENST00000448885 ZKSCAN1P17029 563 aaPredicted RBP7.52□□□□□ -1.2
PCDH15-219ENST00000448885 NOM1Q5C9Z4 860 aaKnown RBP7.52□□□□□ -1.2
PCDH15-219ENST00000448885 ANKRD45Q5TZF3 282 aa7.52□□□□□ -1.2
PCDH15-219ENST00000448885 NFXL1Q6ZNB6 911 aa7.52□□□□□ -1.2
PCDH15-219ENST00000448885 FAM161AQ3B820 660 aa7.52□□□□□ -1.21
PCDH15-219ENST00000448885 NLRP13Q86W25 1043 aa7.52□□□□□ -1.21
PCDH15-219ENST00000448885 VPS37DQ86XT2 251 aa7.52□□□□□ -1.21
PCDH15-219ENST00000448885 IFIT2P09913 472 aaKnown RBP7.52□□□□□ -1.21
PCDH15-219ENST00000448885 RNF20Q5VTR2 975 aa7.52□□□□□ -1.21
PCDH15-219ENST00000448885 ZKSCAN2Q63HK3 967 aa7.52□□□□□ -1.21
PCDH15-219ENST00000448885 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.52□□□□□ -1.21
PCDH15-219ENST00000448885 WASHC2CQ9Y4E1 1318 aa7.52□□□□□ -1.21
PCDH15-219ENST00000448885 VPS8Q8N3P4 1428 aa7.52□□□□□ -1.21
PCDH15-219ENST00000448885 CPLX1O14810 134 aa7.52□□□□□ -1.21
PCDH15-219ENST00000448885 ODF2Q5BJF6 829 aa7.51□□□□□ -1.21
PCDH15-219ENST00000448885 CT47A1Q5JQC4 288 aaPredicted RBP7.51□□□□□ -1.21
PCDH15-219ENST00000448885 E9PSI1 815 aa7.51□□□□□ -1.21
PCDH15-219ENST00000448885 KIF3BO15066 747 aa7.51□□□□□ -1.21
PCDH15-219ENST00000448885 REC8O95072 547 aa7.51□□□□□ -1.21
PCDH15-219ENST00000448885 TRDNQ13061 729 aa7.51□□□□□ -1.21
PCDH15-219ENST00000448885 CCDC18Q5T9S5 1454 aa7.51□□□□□ -1.21
PCDH15-219ENST00000448885 RDXP35241 583 aaKnown RBP7.51□□□□□ -1.21
PCDH15-219ENST00000448885 ARGLU1Q9NWB6 273 aaPredicted RBP7.51□□□□□ -1.21
PCDH15-219ENST00000448885 RAB3GAP2Q9H2M9 1393 aa7.51□□□□□ -1.21
PCDH15-219ENST00000448885 NAP1L1P55209 391 aaKnown RBP7.51□□□□□ -1.21
PCDH15-219ENST00000448885 HOMER1Q86YM7 354 aa7.51□□□□□ -1.21
PCDH15-219ENST00000448885 BRMS1Q9HCU9 246 aa7.51□□□□□ -1.21
PCDH15-219ENST00000448885 CGNL1Q0VF96 1302 aa7.5□□□□□ -1.21
PCDH15-219ENST00000448885 DDX58O95786 925 aaKnown RBP7.5□□□□□ -1.21
PCDH15-219ENST00000448885 APPP05067 770 aa7.5□□□□□ -1.21
PCDH15-219ENST00000448885 RSPH4AQ5TD94 716 aa7.5□□□□□ -1.21
PCDH15-219ENST00000448885 NUTM2DQ5VT03 806 aaPredicted RBP7.5□□□□□ -1.21
PCDH15-219ENST00000448885 MYO6Q9UM54 1294 aa7.5□□□□□ -1.21
PCDH15-219ENST00000448885 C9orf78Q9NZ63 289 aaPredicted RBP7.5□□□□□ -1.21
PCDH15-219ENST00000448885 HSP90AB2PQ58FF8 381 aa7.5□□□□□ -1.21
PCDH15-219ENST00000448885 BICD2Q8TD16 824 aa7.5□□□□□ -1.21
PCDH15-219ENST00000448885 EPS15P42566 896 aa7.5□□□□□ -1.21
PCDH15-219ENST00000448885 SASS6Q6UVJ0 657 aa7.5□□□□□ -1.21
PCDH15-219ENST00000448885 EVC2Q86UK5 1308 aa7.49□□□□□ -1.21
PCDH15-219ENST00000448885 TEFQ10587 303 aa7.49□□□□□ -1.21
PCDH15-219ENST00000448885 SAFBQ15424 915 aaKnown RBP eCLIP7.49□□□□□ -1.21
PCDH15-219ENST00000448885 DCTN1Q14203 1278 aa7.49□□□□□ -1.21
PCDH15-219ENST00000448885 OLFM4Q6UX06 510 aa7.49□□□□□ -1.21
PCDH15-219ENST00000448885 CCDC173Q0VFZ6 552 aa7.49□□□□□ -1.21
PCDH15-219ENST00000448885 TARBP1Q13395 1621 aaKnown RBP7.48□□□□□ -1.21
PCDH15-219ENST00000448885 G3BP1Q13283 466 aaKnown RBP eCLIP7.48□□□□□ -1.21
PCDH15-219ENST00000448885 RBM33Q96EV2 1170 aaKnown RBP7.48□□□□□ -1.21
PCDH15-219ENST00000448885 PDS5BQ9NTI5 1447 aa7.48□□□□□ -1.21
PCDH15-219ENST00000448885 R3HCC1Q9Y3T6 440 aaKnown RBP7.48□□□□□ -1.21
PCDH15-219ENST00000448885 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.48□□□□□ -1.21
PCDH15-219ENST00000448885 ERCC4Q92889 916 aaPredicted RBP7.48□□□□□ -1.21
PCDH15-219ENST00000448885 WWC2Q6AWC2 1192 aa7.48□□□□□ -1.21
PCDH15-219ENST00000448885 MNS1Q8NEH6 495 aa7.48□□□□□ -1.21
PCDH15-219ENST00000448885 NAT10Q9H0A0 1025 aaKnown RBP7.48□□□□□ -1.21
PCDH15-219ENST00000448885 DDX19BQ9UMR2 479 aa7.48□□□□□ -1.21
PCDH15-219ENST00000448885 RRP7AQ9Y3A4 280 aaKnown RBP7.48□□□□□ -1.21
PCDH15-219ENST00000448885 NINLQ9Y2I6 1382 aa7.48□□□□□ -1.21
PCDH15-219ENST00000448885 HSP90AB4PQ58FF6 505 aa7.48□□□□□ -1.21
PCDH15-219ENST00000448885 CCDC144AA2RUR9 1427 aa7.48□□□□□ -1.21
PCDH15-219ENST00000448885 ERC2O15083 957 aa7.48□□□□□ -1.21
PCDH15-219ENST00000448885 GSE1Q14687 1217 aa7.48□□□□□ -1.21
PCDH15-219ENST00000448885 WASHC2AQ641Q2 1341 aa7.47□□□□□ -1.21
PCDH15-219ENST00000448885 API5Q9BZZ5 524 aaKnown RBP7.47□□□□□ -1.21
PCDH15-219ENST00000448885 EIF2S2P20042 333 aaKnown RBP7.47□□□□□ -1.21
PCDH15-219ENST00000448885 HNRNPMP52272 730 aaKnown RBP eCLIP7.47□□□□□ -1.21
PCDH15-219ENST00000448885 FOXD4L6Q3SYB3 417 aaPredicted RBP7.47□□□□□ -1.21
PCDH15-219ENST00000448885 INTS3Q68E01 1043 aaKnown RBP7.47□□□□□ -1.21
PCDH15-219ENST00000448885 FOXD4L3Q6VB84 417 aaPredicted RBP7.47□□□□□ -1.21
PCDH15-219ENST00000448885 CCDC73Q6ZRK6 1079 aa7.47□□□□□ -1.21
PCDH15-219ENST00000448885 CAGE1Q8TC20 777 aa7.47□□□□□ -1.21
PCDH15-219ENST00000448885 LAMC3Q9Y6N6 1575 aa7.47□□□□□ -1.21
PCDH15-219ENST00000448885 XBP1P17861 261 aa7.47□□□□□ -1.21
PCDH15-219ENST00000448885 SMC3Q9UQE7 1217 aa7.47□□□□□ -1.21
PCDH15-219ENST00000448885 NGEFQ8N5V2 710 aa7.46□□□□□ -1.21
PCDH15-219ENST00000448885 TRAK1Q9UPV9 953 aa7.46□□□□□ -1.21
PCDH15-219ENST00000448885 SOGA1O94964 1423 aa7.46□□□□□ -1.22
PCDH15-219ENST00000448885 RRP1P56182 461 aaKnown RBP7.46□□□□□ -1.22
PCDH15-219ENST00000448885 ABCA5Q8WWZ7 1642 aa7.46□□□□□ -1.22
PCDH15-219ENST00000448885 HSP90B2PQ58FF3 399 aa7.46□□□□□ -1.22
PCDH15-219ENST00000448885 CCDC191Q8NCU4 936 aa7.46□□□□□ -1.22
PCDH15-219ENST00000448885 CCP110O43303 1012 aa7.45□□□□□ -1.22
PCDH15-219ENST00000448885 MAP7D2Q96T17 732 aa7.45□□□□□ -1.22
PCDH15-219ENST00000448885 CWC15Q9P013 229 aaKnown RBP7.45□□□□□ -1.22
PCDH15-219ENST00000448885 LETM1O95202 739 aaPredicted RBP7.45□□□□□ -1.22
PCDH15-219ENST00000448885 PDE4AP27815 886 aa7.45□□□□□ -1.22
PCDH15-219ENST00000448885 PANK3Q9H999 370 aa7.45□□□□□ -1.22
PCDH15-219ENST00000448885 CCDC39Q9UFE4 941 aa7.45□□□□□ -1.22
PCDH15-219ENST00000448885 TSHZ2Q9NRE2 1034 aa7.45□□□□□ -1.22
PCDH15-219ENST00000448885 NUTM2FA1L443 756 aa7.45□□□□□ -1.22
PCDH15-219ENST00000448885 VGFO15240 615 aaPredicted RBP7.45□□□□□ -1.22
PCDH15-219ENST00000448885 NUCB2P80303 420 aa7.45□□□□□ -1.22
PCDH15-219ENST00000448885 ZRSR2Q15696 482 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms