RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 KIF3AQ9Y496 699 aa13.42□□□□□ -0.26
LINC00342-202ENST00000448494 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
LINC00342-202ENST00000448494 FAM193AP78312 1265 aa13.4□□□□□ -0.26
LINC00342-202ENST00000448494 RALBP1Q15311 655 aa13.4□□□□□ -0.26
LINC00342-202ENST00000448494 TBC1D32Q96NH3 1257 aa13.4□□□□□ -0.26
LINC00342-202ENST00000448494 FEZ1Q99689 392 aa13.4□□□□□ -0.26
LINC00342-202ENST00000448494 ZNF608Q9ULD9 1512 aaPredicted RBP13.4□□□□□ -0.26
LINC00342-202ENST00000448494 CERS3Q8IU89 383 aa13.4□□□□□ -0.26
LINC00342-202ENST00000448494 EFCC1Q9HA90 598 aa13.4□□□□□ -0.26
LINC00342-202ENST00000448494 TIAM1Q13009 1591 aa13.4□□□□□ -0.26
LINC00342-202ENST00000448494 IFT140Q96RY7 1462 aa13.4□□□□□ -0.26
LINC00342-202ENST00000448494 PLIN1O60240 522 aa13.39□□□□□ -0.27
LINC00342-202ENST00000448494 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
LINC00342-202ENST00000448494 PANK3Q9H999 370 aa13.39□□□□□ -0.27
LINC00342-202ENST00000448494 BRD4O60885 1362 aaPredicted RBP13.39□□□□□ -0.27
LINC00342-202ENST00000448494 MAPK8IP3Q9UPT6 1336 aa13.38□□□□□ -0.27
LINC00342-202ENST00000448494 AEBP1Q8IUX7 1158 aa13.38□□□□□ -0.27
LINC00342-202ENST00000448494 CCDC18Q5T9S5 1454 aa13.38□□□□□ -0.27
LINC00342-202ENST00000448494 GBP4Q96PP9 640 aa13.38□□□□□ -0.27
LINC00342-202ENST00000448494 ZMYM3Q14202 1370 aa13.38□□□□□ -0.27
LINC00342-202ENST00000448494 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
LINC00342-202ENST00000448494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC00342-202ENST00000448494 SPATA31E1Q6ZUB1 1445 aa13.37□□□□□ -0.27
LINC00342-202ENST00000448494 CALCOCO1Q9P1Z2 691 aa13.37□□□□□ -0.27
LINC00342-202ENST00000448494 SEC24BO95487 1268 aa13.36□□□□□ -0.27
LINC00342-202ENST00000448494 GRIPAP1Q4V328 841 aa13.36□□□□□ -0.27
LINC00342-202ENST00000448494 CCDC39Q9UFE4 941 aa13.36□□□□□ -0.27
LINC00342-202ENST00000448494 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
LINC00342-202ENST00000448494 PDCL2Q8N4E4 241 aa13.36□□□□□ -0.27
LINC00342-202ENST00000448494 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
LINC00342-202ENST00000448494 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
LINC00342-202ENST00000448494 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
LINC00342-202ENST00000448494 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
LINC00342-202ENST00000448494 OGFRQ9NZT2 677 aa13.35□□□□□ -0.27
LINC00342-202ENST00000448494 INSRP06213 1382 aa13.35□□□□□ -0.27
LINC00342-202ENST00000448494 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
LINC00342-202ENST00000448494 LRRC9Q6ZRR7 1453 aa13.34□□□□□ -0.27
LINC00342-202ENST00000448494 CAPN2P17655 700 aa13.34□□□□□ -0.27
LINC00342-202ENST00000448494 CC2D1BQ5T0F9 858 aaKnown RBP13.34□□□□□ -0.27
LINC00342-202ENST00000448494 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
LINC00342-202ENST00000448494 NCOA3Q9Y6Q9 1424 aa13.33□□□□□ -0.27
LINC00342-202ENST00000448494 CYB5RLQ6IPT4 315 aa13.33□□□□□ -0.28
LINC00342-202ENST00000448494 CTTNBP2Q8WZ74 1663 aa13.33□□□□□ -0.28
LINC00342-202ENST00000448494 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
LINC00342-202ENST00000448494 CHD1O14646 1710 aa13.32□□□□□ -0.28
LINC00342-202ENST00000448494 DDIT3P35638 169 aa13.32□□□□□ -0.28
LINC00342-202ENST00000448494 ZNF445P59923 1031 aa13.32□□□□□ -0.28
LINC00342-202ENST00000448494 C20orf194Q5TEA3 1177 aa13.32□□□□□ -0.28
LINC00342-202ENST00000448494 SLFN14P0C7P3 912 aa13.32□□□□□ -0.28
LINC00342-202ENST00000448494 PLEKHH2Q8IVE3 1493 aa13.32□□□□□ -0.28
LINC00342-202ENST00000448494 ZMYM4Q5VZL5 1548 aa13.32□□□□□ -0.28
LINC00342-202ENST00000448494 HFM1A2PYH4 1435 aa13.31□□□□□ -0.28
LINC00342-202ENST00000448494 KIAA2012Q0VF49 1180 aa13.31□□□□□ -0.28
LINC00342-202ENST00000448494 C14orf37Q86TY3 774 aa13.31□□□□□ -0.28
LINC00342-202ENST00000448494 PRXQ9BXM0 1461 aa13.31□□□□□ -0.28
LINC00342-202ENST00000448494 MIA2Q96PC5 1412 aa13.31□□□□□ -0.28
LINC00342-202ENST00000448494 IGSF3O75054 1194 aa13.31□□□□□ -0.28
LINC00342-202ENST00000448494 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
LINC00342-202ENST00000448494 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
LINC00342-202ENST00000448494 KIAA1107Q9UPP5 1409 aa13.3□□□□□ -0.28
LINC00342-202ENST00000448494 SENP3-EIF4A1A0A087X0R7 540 aa13.3□□□□□ -0.28
LINC00342-202ENST00000448494 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
LINC00342-202ENST00000448494 MFAP1P55081 439 aaKnown RBP13.3□□□□□ -0.28
LINC00342-202ENST00000448494 CEP120Q8N960 986 aa13.3□□□□□ -0.28
LINC00342-202ENST00000448494 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.3□□□□□ -0.28
LINC00342-202ENST00000448494 ANKRD7Q92527 254 aa13.3□□□□□ -0.28
LINC00342-202ENST00000448494 PHF14O94880 888 aa13.29□□□□□ -0.28
LINC00342-202ENST00000448494 CREBRFQ8IUR6 639 aa13.29□□□□□ -0.28
LINC00342-202ENST00000448494 TNPO1Q92973 898 aaKnown RBP13.29□□□□□ -0.28
LINC00342-202ENST00000448494 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
LINC00342-202ENST00000448494 KLHL40Q2TBA0 621 aa13.29□□□□□ -0.28
LINC00342-202ENST00000448494 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
LINC00342-202ENST00000448494 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
LINC00342-202ENST00000448494 BCL2L12Q9HB09 334 aa13.29□□□□□ -0.28
LINC00342-202ENST00000448494 ARHGAP31Q2M1Z3 1444 aa13.29□□□□□ -0.28
LINC00342-202ENST00000448494 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
LINC00342-202ENST00000448494 PATL2C9JE40 543 aaKnown RBP13.28□□□□□ -0.28
LINC00342-202ENST00000448494 SPRYD3Q8NCJ5 442 aa13.28□□□□□ -0.28
LINC00342-202ENST00000448494 CDCA7LQ96GN5 454 aa13.28□□□□□ -0.28
LINC00342-202ENST00000448494 ARHGAP35Q9NRY4 1499 aa13.28□□□□□ -0.28
LINC00342-202ENST00000448494 KIF15Q9NS87 1388 aa13.27□□□□□ -0.28
LINC00342-202ENST00000448494 U2AF2P26368 475 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC00342-202ENST00000448494 RAB3GAP1Q15042 981 aa13.27□□□□□ -0.29
LINC00342-202ENST00000448494 GOLGA6L22H0YM25 854 aa13.26□□□□□ -0.29
LINC00342-202ENST00000448494 CTR9Q6PD62 1173 aa13.26□□□□□ -0.29
LINC00342-202ENST00000448494 HSCBQ8IWL3 235 aa13.26□□□□□ -0.29
LINC00342-202ENST00000448494 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
LINC00342-202ENST00000448494 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
LINC00342-202ENST00000448494 TERF2Q15554 542 aa13.25□□□□□ -0.29
LINC00342-202ENST00000448494 CHMP4CQ96CF2 233 aa13.25□□□□□ -0.29
LINC00342-202ENST00000448494 TSC1Q92574 1164 aa13.25□□□□□ -0.29
LINC00342-202ENST00000448494 MCCP23508 829 aa13.24□□□□□ -0.29
LINC00342-202ENST00000448494 LMOD3Q0VAK6 560 aa13.24□□□□□ -0.29
LINC00342-202ENST00000448494 CLEC17AQ6ZS10 378 aa13.24□□□□□ -0.29
LINC00342-202ENST00000448494 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
LINC00342-202ENST00000448494 MYCBPQ99417 103 aaPredicted RBP13.24□□□□□ -0.29
LINC00342-202ENST00000448494 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
LINC00342-202ENST00000448494 FMN1Q68DA7 1419 aa13.24□□□□□ -0.29
LINC00342-202ENST00000448494 DNMBPQ6XZF7 1577 aa13.24□□□□□ -0.29
LINC00342-202ENST00000448494 LOC102724159A0A0B4J2E5 919 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms