RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 Q6ZNB5 142 aa6.41□□□□□ -1.38
PMS1-216ENST00000447734 CCDC97Q96F63 343 aaPredicted RBP6.41□□□□□ -1.38
PMS1-216ENST00000447734 RAD21O60216 631 aa6.4□□□□□ -1.38
PMS1-216ENST00000447734 PROSER2Q86WR7 435 aaPredicted RBP6.4□□□□□ -1.38
PMS1-216ENST00000447734 AEBP1Q8IUX7 1158 aa6.4□□□□□ -1.38
PMS1-216ENST00000447734 ANKK1Q8NFD2 765 aa6.4□□□□□ -1.38
PMS1-216ENST00000447734 WBP1LQ9NX94 342 aa6.4□□□□□ -1.38
PMS1-216ENST00000447734 SERPINA10Q9UK55 444 aa6.4□□□□□ -1.38
PMS1-216ENST00000447734 ZNF777Q9ULD5 760 aaPredicted RBP6.4□□□□□ -1.38
PMS1-216ENST00000447734 ZFRQ96KR1 1074 aaKnown RBP6.39□□□□□ -1.39
PMS1-216ENST00000447734 GNPATO15228 680 aa6.38□□□□□ -1.39
PMS1-216ENST00000447734 LAPTM4BQ86VI4 370 aa6.38□□□□□ -1.39
PMS1-216ENST00000447734 KIAA1468Q9P260 1216 aa6.38□□□□□ -1.39
PMS1-216ENST00000447734 MAP3K9P80192 1104 aa6.37□□□□□ -1.39
PMS1-216ENST00000447734 GRXCR2A6NFK2 248 aa6.36□□□□□ -1.39
PMS1-216ENST00000447734 HIC1Q14526 733 aa6.36□□□□□ -1.39
PMS1-216ENST00000447734 TMCO4Q5TGY1 634 aa6.36□□□□□ -1.39
PMS1-216ENST00000447734 GIGYF2Q6Y7W6 1299 aaKnown RBP6.36□□□□□ -1.39
PMS1-216ENST00000447734 SEPT9Q9UHD8 586 aaPredicted RBP6.36□□□□□ -1.39
PMS1-216ENST00000447734 FCHSD2O94868 740 aa6.35□□□□□ -1.39
PMS1-216ENST00000447734 PHF14O94880 888 aa6.35□□□□□ -1.39
PMS1-216ENST00000447734 MS4A1P11836 297 aa6.35□□□□□ -1.39
PMS1-216ENST00000447734 KCNC4Q03721 635 aa6.35□□□□□ -1.39
PMS1-216ENST00000447734 NYAP1Q6ZVC0 841 aa6.35□□□□□ -1.39
PMS1-216ENST00000447734 SH3D19Q5HYK7 790 aa6.34□□□□□ -1.39
PMS1-216ENST00000447734 TYW1BQ6NUM6 668 aa6.34□□□□□ -1.39
PMS1-216ENST00000447734 FNBP4Q8N3X1 1017 aaPredicted RBP6.34□□□□□ -1.39
PMS1-216ENST00000447734 FECHP22830 423 aa6.33□□□□□ -1.4
PMS1-216ENST00000447734 C6orf132Q5T0Z8 1188 aa6.33□□□□□ -1.4
PMS1-216ENST00000447734 RETREG2Q8NC44 543 aa6.33□□□□□ -1.4
PMS1-216ENST00000447734 RGS22Q8NE09 1264 aa6.33□□□□□ -1.4
PMS1-216ENST00000447734 POM121Q96HA1 1249 aa6.33□□□□□ -1.4
PMS1-216ENST00000447734 TRIM6-TRIM34B2RNG4 842 aa6.32□□□□□ -1.4
PMS1-216ENST00000447734 FBXW7Q969H0 707 aa6.32□□□□□ -1.4
PMS1-216ENST00000447734 ATP1B4Q9UN42 357 aaPredicted RBP6.32□□□□□ -1.4
PMS1-216ENST00000447734 MTMR7Q9Y216 660 aa6.32□□□□□ -1.4
PMS1-216ENST00000447734 MFAP1P55081 439 aaKnown RBP6.31□□□□□ -1.4
PMS1-216ENST00000447734 FAM98CQ17RN3 349 aaKnown RBP6.31□□□□□ -1.4
PMS1-216ENST00000447734 TRAF7Q6Q0C0 670 aa6.31□□□□□ -1.4
PMS1-216ENST00000447734 GZF1Q9H116 711 aaPredicted RBP6.31□□□□□ -1.4
PMS1-216ENST00000447734 TSR3Q9UJK0 312 aaKnown RBP6.3□□□□□ -1.4
PMS1-216ENST00000447734 HPS5Q9UPZ3 1129 aa6.3□□□□□ -1.4
PMS1-216ENST00000447734 GFRA3O60609 400 aa6.29□□□□□ -1.4
PMS1-216ENST00000447734 OSBPP22059 807 aa6.29□□□□□ -1.4
PMS1-216ENST00000447734 LAPTM4AQ15012 233 aa6.29□□□□□ -1.4
PMS1-216ENST00000447734 SKIV2LQ15477 1246 aaKnown RBP6.29□□□□□ -1.4
PMS1-216ENST00000447734 TJAP1Q5JTD0 557 aa6.29□□□□□ -1.4
PMS1-216ENST00000447734 RBM33Q96EV2 1170 aaKnown RBP6.29□□□□□ -1.4
PMS1-216ENST00000447734 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.29□□□□□ -1.4
PMS1-216ENST00000447734 TSKSQ9UJT2 592 aa6.29□□□□□ -1.4
PMS1-216ENST00000447734 C3orf80F5H4A9 247 aa6.28□□□□□ -1.4
PMS1-216ENST00000447734 RBM25P49756 843 aaKnown RBP6.28□□□□□ -1.4
PMS1-216ENST00000447734 REPIN1Q9BWE0 567 aaKnown RBP6.28□□□□□ -1.4
PMS1-216ENST00000447734 SPDYE5A6NIY4 337 aa6.27□□□□□ -1.41
PMS1-216ENST00000447734 IRF5Q13568 498 aa6.27□□□□□ -1.41
PMS1-216ENST00000447734 FOXD4L5Q5VV16 416 aaPredicted RBP6.27□□□□□ -1.41
PMS1-216ENST00000447734 FOXD4L4Q8WXT5 416 aaPredicted RBP6.27□□□□□ -1.41
PMS1-216ENST00000447734 LRCH3Q96II8 777 aa6.27□□□□□ -1.41
PMS1-216ENST00000447734 EPAS1Q99814 870 aa6.27□□□□□ -1.41
PMS1-216ENST00000447734 COG6Q9Y2V7 657 aa6.27□□□□□ -1.41
PMS1-216ENST00000447734 ZNF330Q9Y3S2 320 aaPredicted RBP6.27□□□□□ -1.41
PMS1-216ENST00000447734 CLCN1P35523 988 aa6.26□□□□□ -1.41
PMS1-216ENST00000447734 PDE4CQ08493 712 aa6.26□□□□□ -1.41
PMS1-216ENST00000447734 TSR1Q2NL82 804 aaKnown RBP6.26□□□□□ -1.41
PMS1-216ENST00000447734 DDX12PQ92771 950 aa6.26□□□□□ -1.41
PMS1-216ENST00000447734 FAM198AQ9UFP1 575 aa6.26□□□□□ -1.41
PMS1-216ENST00000447734 PPP1R15AO75807 674 aaPredicted RBP6.25□□□□□ -1.41
PMS1-216ENST00000447734 PTGDRQ13258 359 aa6.25□□□□□ -1.41
PMS1-216ENST00000447734 PRKD2Q9BZL6 878 aa6.25□□□□□ -1.41
PMS1-216ENST00000447734 GPCPD1Q9NPB8 672 aa6.25□□□□□ -1.41
PMS1-216ENST00000447734 LOC105371045A0A1W2PR82 267 aa6.24□□□□□ -1.41
PMS1-216ENST00000447734 PATL2C9JE40 543 aaKnown RBP6.24□□□□□ -1.41
PMS1-216ENST00000447734 SMAPO00193 183 aa6.24□□□□□ -1.41
PMS1-216ENST00000447734 NRG2O14511 850 aaPredicted RBP6.24□□□□□ -1.41
PMS1-216ENST00000447734 PRIM1P49642 420 aaKnown RBP6.24□□□□□ -1.41
PMS1-216ENST00000447734 PPP1R18Q6NYC8 613 aa6.24□□□□□ -1.41
PMS1-216ENST00000447734 PROCA1Q8NCQ7 364 aaPredicted RBP6.24□□□□□ -1.41
PMS1-216ENST00000447734 POLR3EQ9NVU0 708 aa6.24□□□□□ -1.41
PMS1-216ENST00000447734 ACIN1Q9UKV3 1341 aaKnown RBP6.24□□□□□ -1.41
PMS1-216ENST00000447734 SSTR3P32745 418 aaPredicted RBP6.23□□□□□ -1.41
PMS1-216ENST00000447734 MDM2Q00987 491 aaPredicted RBP6.23□□□□□ -1.41
PMS1-216ENST00000447734 ZNF428Q96B54 188 aa6.23□□□□□ -1.41
PMS1-216ENST00000447734 MTRQ99707 1265 aa6.23□□□□□ -1.41
PMS1-216ENST00000447734 BEGAINQ9BUH8 593 aa6.23□□□□□ -1.41
PMS1-216ENST00000447734 TMUB1Q9BVT8 246 aa6.23□□□□□ -1.41
PMS1-216ENST00000447734 IGSF3O75054 1194 aa6.22□□□□□ -1.41
PMS1-216ENST00000447734 EN1Q05925 392 aaPredicted RBP6.22□□□□□ -1.41
PMS1-216ENST00000447734 SAMD7Q7Z3H4 446 aa6.22□□□□□ -1.41
PMS1-216ENST00000447734 WWC1Q8IX03 1113 aa6.22□□□□□ -1.41
PMS1-216ENST00000447734 BANK1Q8NDB2 785 aa6.22□□□□□ -1.41
PMS1-216ENST00000447734 ZNF516Q92618 1163 aa6.22□□□□□ -1.41
PMS1-216ENST00000447734 PPP4CP60510 307 aa6.21□□□□□ -1.42
PMS1-216ENST00000447734 CALR3Q96L12 384 aaKnown RBP6.21□□□□□ -1.42
PMS1-216ENST00000447734 V9GY48 417 aaPredicted RBP6.21□□□□□ -1.42
PMS1-216ENST00000447734 SHROOM4Q9ULL8 1493 aa6.21□□□□□ -1.42
PMS1-216ENST00000447734 E9PSI1 815 aa6.2□□□□□ -1.42
PMS1-216ENST00000447734 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.2□□□□□ -1.42
PMS1-216ENST00000447734 SNRKQ9NRH2 765 aa6.2□□□□□ -1.42
PMS1-216ENST00000447734 RFC5P40937 340 aa6.19□□□□□ -1.42
PMS1-216ENST00000447734 CLK2P49760 499 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms