RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 HRCP23327 699 aa21.1■□□□□ 0.97
SREBF1-207ENST00000447641 IDI1Q13907 227 aa21.1■□□□□ 0.97
SREBF1-207ENST00000447641 RGS17Q9UGC6 210 aaPredicted RBP21.1■□□□□ 0.97
SREBF1-207ENST00000447641 RAB3GAP2Q9H2M9 1393 aa21.1■□□□□ 0.97
SREBF1-207ENST00000447641 SLC52A1Q9NWF4 448 aa21.09■□□□□ 0.97
SREBF1-207ENST00000447641 ROBO1Q9Y6N7 1651 aa21.07■□□□□ 0.96
SREBF1-207ENST00000447641 SLC4A1APQ9BWU0 796 aaKnown RBP21.05■□□□□ 0.96
SREBF1-207ENST00000447641 NWD1Q149M9 1564 aa21.05■□□□□ 0.96
SREBF1-207ENST00000447641 SPHKAPQ2M3C7 1700 aa21.04■□□□□ 0.96
SREBF1-207ENST00000447641 MPHOSPH9Q99550 1183 aa21.03■□□□□ 0.96
SREBF1-207ENST00000447641 TMEM2Q9UHN6 1383 aa21.02■□□□□ 0.96
SREBF1-207ENST00000447641 TXNDC2Q86VQ3 553 aa21.01■□□□□ 0.95
SREBF1-207ENST00000447641 MYO5BQ9ULV0 1848 aa21.01■□□□□ 0.95
SREBF1-207ENST00000447641 SETD1AO15047 1707 aaKnown RBP21.01■□□□□ 0.95
SREBF1-207ENST00000447641 FAM135BQ49AJ0 1406 aa21■□□□□ 0.95
SREBF1-207ENST00000447641 ADGRB3O60242 1522 aa20.99■□□□□ 0.95
SREBF1-207ENST00000447641 TRIM26Q12899 539 aaPredicted RBP20.99■□□□□ 0.95
SREBF1-207ENST00000447641 TMEM131LA2VDJ0 1609 aa20.99■□□□□ 0.95
SREBF1-207ENST00000447641 TRPM2O94759 1503 aa20.98■□□□□ 0.95
SREBF1-207ENST00000447641 TMEM94Q12767 1356 aa20.97■□□□□ 0.95
SREBF1-207ENST00000447641 FOXD1Q16676 465 aa20.94■□□□□ 0.94
SREBF1-207ENST00000447641 STAG3Q9UJ98 1225 aa20.94■□□□□ 0.94
SREBF1-207ENST00000447641 CHD2O14647 1828 aaKnown RBP20.94■□□□□ 0.94
SREBF1-207ENST00000447641 NKTRP30414 1462 aaKnown RBP20.94■□□□□ 0.94
SREBF1-207ENST00000447641 CLTCL1P53675 1640 aa20.93■□□□□ 0.94
SREBF1-207ENST00000447641 PHLPP1O60346 1717 aa20.93■□□□□ 0.94
SREBF1-207ENST00000447641 POTEAQ6S8J7 498 aa20.93■□□□□ 0.94
SREBF1-207ENST00000447641 EID1Q9Y6B2 187 aa20.91■□□□□ 0.94
SREBF1-207ENST00000447641 ZFYVE9O95405 1425 aa20.9■□□□□ 0.94
SREBF1-207ENST00000447641 RBM33Q96EV2 1170 aaKnown RBP20.9■□□□□ 0.94
SREBF1-207ENST00000447641 COL16A1Q07092 1604 aaPredicted RBP20.89■□□□□ 0.94
SREBF1-207ENST00000447641 KCNA6P17658 529 aa20.88■□□□□ 0.93
SREBF1-207ENST00000447641 SLC26A8Q96RN1 970 aa20.87■□□□□ 0.93
SREBF1-207ENST00000447641 KIF1BO60333 1816 aa20.87■□□□□ 0.93
SREBF1-207ENST00000447641 RIMS2Q9UQ26 1411 aa20.86■□□□□ 0.93
SREBF1-207ENST00000447641 CHGAP10645 457 aaKnown RBP20.85■□□□□ 0.93
SREBF1-207ENST00000447641 ANKRD30BQ9BXX2 1392 aa20.84■□□□□ 0.93
SREBF1-207ENST00000447641 HDGFP51858 240 aaKnown RBP20.83■□□□□ 0.93
SREBF1-207ENST00000447641 LRP6O75581 1613 aa20.82■□□□□ 0.92
SREBF1-207ENST00000447641 CCDC144AA2RUR9 1427 aa20.82■□□□□ 0.92
SREBF1-207ENST00000447641 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.82■□□□□ 0.92
SREBF1-207ENST00000447641 PROSER2Q86WR7 435 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-207ENST00000447641 SPATA31E1Q6ZUB1 1445 aa20.79■□□□□ 0.92
SREBF1-207ENST00000447641 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.79■□□□□ 0.92
SREBF1-207ENST00000447641 PLEKHG1Q9ULL1 1385 aa20.79■□□□□ 0.92
SREBF1-207ENST00000447641 SHPRHQ149N8 1683 aa20.78■□□□□ 0.92
SREBF1-207ENST00000447641 MSH6P52701 1360 aa20.78■□□□□ 0.92
SREBF1-207ENST00000447641 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
SREBF1-207ENST00000447641 AHDC1Q5TGY3 1603 aaPredicted RBP20.77■□□□□ 0.92
SREBF1-207ENST00000447641 RPGRIP1LQ68CZ1 1315 aa20.77■□□□□ 0.91
SREBF1-207ENST00000447641 ZNF326Q5BKZ1 582 aaKnown RBP20.76■□□□□ 0.91
SREBF1-207ENST00000447641 JCADQ9P266 1359 aa20.75■□□□□ 0.91
SREBF1-207ENST00000447641 DIP2AQ14689 1571 aa20.74■□□□□ 0.91
SREBF1-207ENST00000447641 ADAMTS13Q76LX8 1427 aa20.74■□□□□ 0.91
SREBF1-207ENST00000447641 PPLO60437 1756 aa20.73■□□□□ 0.91
SREBF1-207ENST00000447641 PPP1R15AO75807 674 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-207ENST00000447641 NUTM2DQ5VT03 806 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-207ENST00000447641 SLAIN2Q9P270 581 aa20.72■□□□□ 0.91
SREBF1-207ENST00000447641 TBX22Q9Y458 520 aa20.71■□□□□ 0.91
SREBF1-207ENST00000447641 VGFO15240 615 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-207ENST00000447641 SETBP1Q9Y6X0 1596 aa20.7■□□□□ 0.9
SREBF1-207ENST00000447641 NRXN3Q9Y4C0 1643 aa20.7■□□□□ 0.9
SREBF1-207ENST00000447641 IFT172Q9UG01 1749 aa20.7■□□□□ 0.9
SREBF1-207ENST00000447641 DHX57Q6P158 1386 aaKnown RBP20.69■□□□□ 0.9
SREBF1-207ENST00000447641 NCOA3Q9Y6Q9 1424 aa20.69■□□□□ 0.9
SREBF1-207ENST00000447641 RGL3Q3MIN7 710 aa20.68■□□□□ 0.9
SREBF1-207ENST00000447641 XRN1Q8IZH2 1706 aaKnown RBP20.67■□□□□ 0.9
SREBF1-207ENST00000447641 PTPRUQ92729 1446 aa20.66■□□□□ 0.9
SREBF1-207ENST00000447641 NHSL1Q5SYE7 1610 aa20.65■□□□□ 0.9
SREBF1-207ENST00000447641 BCANQ96GW7 911 aa20.65■□□□□ 0.9
SREBF1-207ENST00000447641 PCGF6Q9BYE7 350 aa20.65■□□□□ 0.9
SREBF1-207ENST00000447641 PIK3R4Q99570 1358 aa20.63■□□□□ 0.89
SREBF1-207ENST00000447641 ADGRF5Q8IZF2 1346 aa20.62■□□□□ 0.89
SREBF1-207ENST00000447641 SPATA31A6Q5VVP1 1343 aa20.61■□□□□ 0.89
SREBF1-207ENST00000447641 ASXL1Q8IXJ9 1541 aa20.6■□□□□ 0.89
SREBF1-207ENST00000447641 NRXN1Q9ULB1 1477 aa20.6■□□□□ 0.89
SREBF1-207ENST00000447641 MYOM2P54296 1465 aa20.59■□□□□ 0.89
SREBF1-207ENST00000447641 SRCAPQ6ZRS2 3230 aa20.59■□□□□ 0.89
SREBF1-207ENST00000447641 METP08581 1390 aa20.59■□□□□ 0.89
SREBF1-207ENST00000447641 UPF1Q92900 1129 aaKnown RBP eCLIP20.58■□□□□ 0.89
SREBF1-207ENST00000447641 STAC3Q96MF2 364 aa20.58■□□□□ 0.89
SREBF1-207ENST00000447641 NALCNQ8IZF0 1738 aa20.58■□□□□ 0.88
SREBF1-207ENST00000447641 PIK3C2GO75747 1445 aa20.57■□□□□ 0.88
SREBF1-207ENST00000447641 DCCP43146 1447 aa20.56■□□□□ 0.88
SREBF1-207ENST00000447641 BRINP3Q76B58 766 aa20.55■□□□□ 0.88
SREBF1-207ENST00000447641 MST1RQ04912 1400 aa20.54■□□□□ 0.88
SREBF1-207ENST00000447641 SIN3AQ96ST3 1273 aa20.54■□□□□ 0.88
SREBF1-207ENST00000447641 C19orf44Q9H6X5 657 aa20.54■□□□□ 0.88
SREBF1-207ENST00000447641 CDK12Q9NYV4 1490 aaPredicted RBP20.54■□□□□ 0.88
SREBF1-207ENST00000447641 CADPS2Q86UW7 1296 aa20.53■□□□□ 0.88
SREBF1-207ENST00000447641 DCAF11Q8TEB1 546 aa20.53■□□□□ 0.88
SREBF1-207ENST00000447641 AMOTL2Q9Y2J4 779 aa20.53■□□□□ 0.88
SREBF1-207ENST00000447641 C14orf93Q9H972 538 aaKnown RBP20.52■□□□□ 0.88
SREBF1-207ENST00000447641 MEX3CQ5U5Q3 659 aaKnown RBP20.51■□□□□ 0.87
SREBF1-207ENST00000447641 ZNF772Q68DY9 489 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-207ENST00000447641 C14orf37Q86TY3 774 aa20.51■□□□□ 0.87
SREBF1-207ENST00000447641 PRAG1Q86YV5 1406 aa20.5■□□□□ 0.87
SREBF1-207ENST00000447641 ATF3P18847 181 aa20.49■□□□□ 0.87
SREBF1-207ENST00000447641 KDM2AQ9Y2K7 1162 aa20.49■□□□□ 0.87
SREBF1-207ENST00000447641 RGS12O14924 1447 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms