RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 RIMS2Q9UQ26 1411 aa28.22■■■□□ 2.11
LRRC42-204ENST00000444987 CHGAP10645 457 aaKnown RBP28.21■■■□□ 2.11
LRRC42-204ENST00000444987 CLTCL1P53675 1640 aa28.19■■■□□ 2.1
LRRC42-204ENST00000444987 PLEKHG1Q9ULL1 1385 aa28.18■■■□□ 2.1
LRRC42-204ENST00000444987 KIF1BO60333 1816 aa28.18■■■□□ 2.1
LRRC42-204ENST00000444987 PPP1R15AO75807 674 aaPredicted RBP28.15■■■□□ 2.1
LRRC42-204ENST00000444987 MPHOSPH9Q99550 1183 aa28.15■■■□□ 2.1
LRRC42-204ENST00000444987 STRCP1A6NGW2 1772 aa28.14■■■□□ 2.09
LRRC42-204ENST00000444987 RAB3GAP2Q9H2M9 1393 aa28.13■■■□□ 2.09
LRRC42-204ENST00000444987 HRCP23327 699 aa28.13■■■□□ 2.09
LRRC42-204ENST00000444987 DIP2AQ14689 1571 aa28.09■■■□□ 2.09
LRRC42-204ENST00000444987 BCANQ96GW7 911 aa28.07■■■□□ 2.08
LRRC42-204ENST00000444987 LRRC7Q96NW7 1537 aa28.07■■■□□ 2.08
LRRC42-204ENST00000444987 SLC26A8Q96RN1 970 aa28.06■■■□□ 2.08
LRRC42-204ENST00000444987 TBX22Q9Y458 520 aa28.06■■■□□ 2.08
LRRC42-204ENST00000444987 KCNA6P17658 529 aa28.05■■■□□ 2.08
LRRC42-204ENST00000444987 ZNF326Q5BKZ1 582 aaKnown RBP28.05■■■□□ 2.08
LRRC42-204ENST00000444987 NWD1Q149M9 1564 aa28.04■■■□□ 2.08
LRRC42-204ENST00000444987 NEXMIFQ5QGS0 1516 aa28.03■■■□□ 2.08
LRRC42-204ENST00000444987 CCDC144AA2RUR9 1427 aa28.03■■■□□ 2.08
LRRC42-204ENST00000444987 PIK3R4Q99570 1358 aa28.02■■■□□ 2.08
LRRC42-204ENST00000444987 RPGRIP1LQ68CZ1 1315 aa28.02■■■□□ 2.08
LRRC42-204ENST00000444987 CHD2O14647 1828 aaKnown RBP28.02■■■□□ 2.08
LRRC42-204ENST00000444987 FOXD1Q16676 465 aa28.01■■■□□ 2.07
LRRC42-204ENST00000444987 SETBP1Q9Y6X0 1596 aa28.01■■■□□ 2.07
LRRC42-204ENST00000444987 NKTRP30414 1462 aaKnown RBP28.01■■■□□ 2.07
LRRC42-204ENST00000444987 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.07
LRRC42-204ENST00000444987 UBAP1LF5GYI3 381 aa27.99■■■□□ 2.07
LRRC42-204ENST00000444987 TOM1O60784 492 aa27.98■■■□□ 2.07
LRRC42-204ENST00000444987 NUTM2DQ5VT03 806 aaPredicted RBP27.98■■■□□ 2.07
LRRC42-204ENST00000444987 VGFO15240 615 aaPredicted RBP27.96■■■□□ 2.07
LRRC42-204ENST00000444987 NRXN3Q9Y4C0 1643 aa27.95■■■□□ 2.06
LRRC42-204ENST00000444987 XIRP1Q702N8 1843 aaKnown RBP27.95■■■□□ 2.06
LRRC42-204ENST00000444987 PPLO60437 1756 aa27.94■■■□□ 2.06
LRRC42-204ENST00000444987 SPATA31E1Q6ZUB1 1445 aa27.92■■■□□ 2.06
LRRC42-204ENST00000444987 PROSER2Q86WR7 435 aaPredicted RBP27.89■■■□□ 2.06
LRRC42-204ENST00000444987 TMEM94Q12767 1356 aa27.88■■■□□ 2.05
LRRC42-204ENST00000444987 NCOA3Q9Y6Q9 1424 aa27.88■■■□□ 2.05
LRRC42-204ENST00000444987 SENP3Q9H4L4 574 aaPredicted RBP27.87■■■□□ 2.05
LRRC42-204ENST00000444987 IFT172Q9UG01 1749 aa27.86■■■□□ 2.05
LRRC42-204ENST00000444987 ANKRD30BQ9BXX2 1392 aa27.86■■■□□ 2.05
LRRC42-204ENST00000444987 ALKQ9UM73 1620 aa27.85■■■□□ 2.05
LRRC42-204ENST00000444987 XRN1Q8IZH2 1706 aaKnown RBP27.82■■■□□ 2.04
LRRC42-204ENST00000444987 AMOTL2Q9Y2J4 779 aa27.81■■■□□ 2.04
LRRC42-204ENST00000444987 PTPRUQ92729 1446 aa27.8■■■□□ 2.04
LRRC42-204ENST00000444987 SETD1AO15047 1707 aaKnown RBP27.8■■■□□ 2.04
LRRC42-204ENST00000444987 RGL3Q3MIN7 710 aa27.79■■■□□ 2.04
LRRC42-204ENST00000444987 METP08581 1390 aa27.78■■■□□ 2.04
LRRC42-204ENST00000444987 MSH6P52701 1360 aa27.78■■■□□ 2.04
LRRC42-204ENST00000444987 PIP4K2BP78356 416 aa27.76■■■□□ 2.03
LRRC42-204ENST00000444987 SCAF1Q9H7N4 1312 aaKnown RBP27.74■■■□□ 2.03
LRRC42-204ENST00000444987 MYOM2P54296 1465 aa27.73■■■□□ 2.03
LRRC42-204ENST00000444987 PRAG1Q86YV5 1406 aa27.73■■■□□ 2.03
LRRC42-204ENST00000444987 ADGRF5Q8IZF2 1346 aa27.71■■■□□ 2.03
LRRC42-204ENST00000444987 PIK3C2GO75747 1445 aa27.7■■■□□ 2.03
LRRC42-204ENST00000444987 RBM33Q96EV2 1170 aaKnown RBP27.7■■■□□ 2.02
LRRC42-204ENST00000444987 STAC3Q96MF2 364 aa27.7■■■□□ 2.02
LRRC42-204ENST00000444987 FAM135BQ49AJ0 1406 aa27.69■■■□□ 2.02
LRRC42-204ENST00000444987 C19orf44Q9H6X5 657 aa27.69■■■□□ 2.02
LRRC42-204ENST00000444987 NRXN1Q9ULB1 1477 aa27.69■■■□□ 2.02
LRRC42-204ENST00000444987 PTCH1Q13635 1447 aa27.68■■■□□ 2.02
LRRC42-204ENST00000444987 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
LRRC42-204ENST00000444987 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.67■■■□□ 2.02
LRRC42-204ENST00000444987 LAMC1P11047 1609 aa27.67■■■□□ 2.02
LRRC42-204ENST00000444987 DCCP43146 1447 aa27.67■■■□□ 2.02
LRRC42-204ENST00000444987 C14orf37Q86TY3 774 aa27.66■■■□□ 2.02
LRRC42-204ENST00000444987 CADPS2Q86UW7 1296 aa27.65■■■□□ 2.02
LRRC42-204ENST00000444987 HSPA1LP34931 641 aa27.63■■■□□ 2.01
LRRC42-204ENST00000444987 SLAIN2Q9P270 581 aa27.62■■■□□ 2.01
LRRC42-204ENST00000444987 ATF3P18847 181 aa27.61■■■□□ 2.01
LRRC42-204ENST00000444987 ROBO1Q9Y6N7 1651 aa27.6■■■□□ 2.01
LRRC42-204ENST00000444987 ADGRL3Q9HAR2 1447 aa27.59■■■□□ 2.01
LRRC42-204ENST00000444987 C14orf93Q9H972 538 aaKnown RBP27.59■■■□□ 2.01
LRRC42-204ENST00000444987 TECPR2O15040 1411 aa27.58■■■□□ 2.01
LRRC42-204ENST00000444987 KNDC1Q76NI1 1749 aa27.58■■■□□ 2.01
LRRC42-204ENST00000444987 LRPPRCP42704 1394 aaKnown RBP27.58■■■□□ 2.01
LRRC42-204ENST00000444987 ROBO2Q9HCK4 1378 aa27.57■■■□□ 2
LRRC42-204ENST00000444987 ABCC11Q96J66 1382 aa27.56■■■□□ 2
LRRC42-204ENST00000444987 ASXL1Q8IXJ9 1541 aa27.56■■■□□ 2
LRRC42-204ENST00000444987 NALCNQ8IZF0 1738 aa27.55■■■□□ 2
LRRC42-204ENST00000444987 DCAF11Q8TEB1 546 aa27.54■■■□□ 2
LRRC42-204ENST00000444987 DHX57Q6P158 1386 aaKnown RBP27.52■■■□□ 2
LRRC42-204ENST00000444987 YTHDC2Q9H6S0 1430 aaKnown RBP27.51■■□□□ 1.99
LRRC42-204ENST00000444987 SIRT1Q96EB6 747 aa27.51■■□□□ 1.99
LRRC42-204ENST00000444987 CFAP70Q5T0N1 1121 aa27.49■■□□□ 1.99
LRRC42-204ENST00000444987 TMEM132EQ6IEE7 984 aa27.48■■□□□ 1.99
LRRC42-204ENST00000444987 MST1RQ04912 1400 aa27.48■■□□□ 1.99
LRRC42-204ENST00000444987 KDM2AQ9Y2K7 1162 aa27.47■■□□□ 1.99
LRRC42-204ENST00000444987 STK26Q9P289 416 aa27.45■■□□□ 1.98
LRRC42-204ENST00000444987 PHLPP1O60346 1717 aa27.44■■□□□ 1.98
LRRC42-204ENST00000444987 ADGRB1O14514 1584 aa27.44■■□□□ 1.98
LRRC42-204ENST00000444987 CDC42BPGQ6DT37 1551 aa27.44■■□□□ 1.98
LRRC42-204ENST00000444987 DLC1Q96QB1 1528 aa27.43■■□□□ 1.98
LRRC42-204ENST00000444987 AHDC1Q5TGY3 1603 aaPredicted RBP27.43■■□□□ 1.98
LRRC42-204ENST00000444987 KIAA1210Q9ULL0 1709 aa27.42■■□□□ 1.98
LRRC42-204ENST00000444987 BRINP3Q76B58 766 aa27.4■■□□□ 1.98
LRRC42-204ENST00000444987 C1orf167Q5SNV9 1468 aa27.38■■□□□ 1.97
LRRC42-204ENST00000444987 WAPLQ7Z5K2 1190 aa27.37■■□□□ 1.97
LRRC42-204ENST00000444987 COL16A1Q07092 1604 aaPredicted RBP27.37■■□□□ 1.97
LRRC42-204ENST00000444987 MED1Q15648 1581 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms