RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 ZFYVE9O95405 1425 aa33.45■■■□□ 2.95
LMBR1-211ENST00000444719 PPP1R15AO75807 674 aaPredicted RBP33.45■■■□□ 2.95
LMBR1-211ENST00000444719 NUTM2DQ5VT03 806 aaPredicted RBP33.44■■■□□ 2.94
LMBR1-211ENST00000444719 HDGFP51858 240 aaKnown RBP33.43■■■□□ 2.94
LMBR1-211ENST00000444719 SLC4A1APQ9BWU0 796 aaKnown RBP33.41■■■□□ 2.94
LMBR1-211ENST00000444719 LRRC7Q96NW7 1537 aa33.4■■■□□ 2.94
LMBR1-211ENST00000444719 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.37■■■□□ 2.93
LMBR1-211ENST00000444719 CLTCL1P53675 1640 aa33.36■■■□□ 2.93
LMBR1-211ENST00000444719 PLEKHG1Q9ULL1 1385 aa33.35■■■□□ 2.93
LMBR1-211ENST00000444719 SCAF1Q9H7N4 1312 aaKnown RBP33.34■■■□□ 2.93
LMBR1-211ENST00000444719 TRPM2O94759 1503 aa33.33■■■□□ 2.93
LMBR1-211ENST00000444719 TOM1O60784 492 aa33.33■■■□□ 2.93
LMBR1-211ENST00000444719 PIP4K2BP78356 416 aa33.33■■■□□ 2.93
LMBR1-211ENST00000444719 ZNF326Q5BKZ1 582 aaKnown RBP33.33■■■□□ 2.93
LMBR1-211ENST00000444719 KIF1BO60333 1816 aa33.31■■■□□ 2.92
LMBR1-211ENST00000444719 XIRP1Q702N8 1843 aaKnown RBP33.31■■■□□ 2.92
LMBR1-211ENST00000444719 KCNA6P17658 529 aa33.31■■■□□ 2.92
LMBR1-211ENST00000444719 FOXD1Q16676 465 aa33.3■■■□□ 2.92
LMBR1-211ENST00000444719 SETD5Q9C0A6 1442 aa33.26■■■□□ 2.91
LMBR1-211ENST00000444719 CHD2O14647 1828 aaKnown RBP33.25■■■□□ 2.91
LMBR1-211ENST00000444719 PROSER2Q86WR7 435 aaPredicted RBP33.24■■■□□ 2.91
LMBR1-211ENST00000444719 RBM33Q96EV2 1170 aaKnown RBP33.24■■■□□ 2.91
LMBR1-211ENST00000444719 MPHOSPH9Q99550 1183 aa33.24■■■□□ 2.91
LMBR1-211ENST00000444719 TBX22Q9Y458 520 aa33.24■■■□□ 2.91
LMBR1-211ENST00000444719 ALKQ9UM73 1620 aa33.23■■■□□ 2.91
LMBR1-211ENST00000444719 ADAMTS13Q76LX8 1427 aa33.21■■■□□ 2.91
LMBR1-211ENST00000444719 NWD1Q149M9 1564 aa33.2■■■□□ 2.91
LMBR1-211ENST00000444719 TMEM94Q12767 1356 aa33.19■■■□□ 2.9
LMBR1-211ENST00000444719 NEXMIFQ5QGS0 1516 aa33.16■■■□□ 2.9
LMBR1-211ENST00000444719 DIP2AQ14689 1571 aa33.15■■■□□ 2.9
LMBR1-211ENST00000444719 RAB3GAP2Q9H2M9 1393 aa33.15■■■□□ 2.9
LMBR1-211ENST00000444719 NKTRP30414 1462 aaKnown RBP33.14■■■□□ 2.9
LMBR1-211ENST00000444719 NRXN3Q9Y4C0 1643 aa33.13■■■□□ 2.89
LMBR1-211ENST00000444719 HSPA1LP34931 641 aa33.12■■■□□ 2.89
LMBR1-211ENST00000444719 ACIN1Q9UKV3 1341 aaKnown RBP33.09■■■□□ 2.89
LMBR1-211ENST00000444719 SETBP1Q9Y6X0 1596 aa33.09■■■□□ 2.89
LMBR1-211ENST00000444719 CCDC144AA2RUR9 1427 aa33.06■■■□□ 2.88
LMBR1-211ENST00000444719 PIK3R4Q99570 1358 aa33.06■■■□□ 2.88
LMBR1-211ENST00000444719 AMOTL2Q9Y2J4 779 aa33.05■■■□□ 2.88
LMBR1-211ENST00000444719 PTPRUQ92729 1446 aa33.04■■■□□ 2.88
LMBR1-211ENST00000444719 PPLO60437 1756 aa33.04■■■□□ 2.88
LMBR1-211ENST00000444719 VGFO15240 615 aaPredicted RBP33.02■■■□□ 2.88
LMBR1-211ENST00000444719 RGL3Q3MIN7 710 aa33.02■■■□□ 2.88
LMBR1-211ENST00000444719 RPGRIP1LQ68CZ1 1315 aa33.02■■■□□ 2.88
LMBR1-211ENST00000444719 MSH6P52701 1360 aa33.01■■■□□ 2.88
LMBR1-211ENST00000444719 METP08581 1390 aa33■■■□□ 2.87
LMBR1-211ENST00000444719 C14orf37Q86TY3 774 aa32.99■■■□□ 2.87
LMBR1-211ENST00000444719 DISP3Q9P2K9 1392 aa32.94■■■□□ 2.86
LMBR1-211ENST00000444719 XRN1Q8IZH2 1706 aaKnown RBP32.94■■■□□ 2.86
LMBR1-211ENST00000444719 SPATA31E1Q6ZUB1 1445 aa32.94■■■□□ 2.86
LMBR1-211ENST00000444719 NCOA3Q9Y6Q9 1424 aa32.9■■■□□ 2.86
LMBR1-211ENST00000444719 SETD1AO15047 1707 aaKnown RBP32.9■■■□□ 2.86
LMBR1-211ENST00000444719 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.9■■■□□ 2.86
LMBR1-211ENST00000444719 ROBO1Q9Y6N7 1651 aa32.89■■■□□ 2.86
LMBR1-211ENST00000444719 FAM135BQ49AJ0 1406 aa32.89■■■□□ 2.86
LMBR1-211ENST00000444719 SLAIN2Q9P270 581 aa32.89■■■□□ 2.86
LMBR1-211ENST00000444719 IFT172Q9UG01 1749 aa32.88■■■□□ 2.85
LMBR1-211ENST00000444719 ADGRF5Q8IZF2 1346 aa32.88■■■□□ 2.85
LMBR1-211ENST00000444719 HRCP23327 699 aa32.87■■■□□ 2.85
LMBR1-211ENST00000444719 C19orf44Q9H6X5 657 aa32.87■■■□□ 2.85
LMBR1-211ENST00000444719 ATF3P18847 181 aa32.83■■■□□ 2.85
LMBR1-211ENST00000444719 ANKRD30BQ9BXX2 1392 aa32.82■■■□□ 2.84
LMBR1-211ENST00000444719 CADPS2Q86UW7 1296 aa32.81■■■□□ 2.84
LMBR1-211ENST00000444719 MED1Q15648 1581 aaPredicted RBP32.74■■■□□ 2.83
LMBR1-211ENST00000444719 ROBO2Q9HCK4 1378 aa32.72■■■□□ 2.83
LMBR1-211ENST00000444719 NALCNQ8IZF0 1738 aa32.72■■■□□ 2.83
LMBR1-211ENST00000444719 PHLPP1O60346 1717 aa32.71■■■□□ 2.83
LMBR1-211ENST00000444719 TMEM132EQ6IEE7 984 aa32.7■■■□□ 2.83
LMBR1-211ENST00000444719 STK26Q9P289 416 aa32.69■■■□□ 2.82
LMBR1-211ENST00000444719 PIK3C2GO75747 1445 aa32.68■■■□□ 2.82
LMBR1-211ENST00000444719 PTCH1Q13635 1447 aa32.68■■■□□ 2.82
LMBR1-211ENST00000444719 ADGRL3Q9HAR2 1447 aa32.68■■■□□ 2.82
LMBR1-211ENST00000444719 DCCP43146 1447 aa32.68■■■□□ 2.82
LMBR1-211ENST00000444719 ILDR2Q71H61 639 aa32.67■■■□□ 2.82
LMBR1-211ENST00000444719 ASXL1Q8IXJ9 1541 aa32.63■■■□□ 2.81
LMBR1-211ENST00000444719 KDM2AQ9Y2K7 1162 aa32.63■■■□□ 2.81
LMBR1-211ENST00000444719 MYOM2P54296 1465 aa32.62■■■□□ 2.81
LMBR1-211ENST00000444719 MST1RQ04912 1400 aa32.62■■■□□ 2.81
LMBR1-211ENST00000444719 CFAP70Q5T0N1 1121 aa32.62■■■□□ 2.81
LMBR1-211ENST00000444719 BRINP3Q76B58 766 aa32.62■■■□□ 2.81
LMBR1-211ENST00000444719 PRAG1Q86YV5 1406 aa32.61■■■□□ 2.81
LMBR1-211ENST00000444719 C14orf93Q9H972 538 aaKnown RBP32.61■■■□□ 2.81
LMBR1-211ENST00000444719 NRXN1Q9ULB1 1477 aa32.61■■■□□ 2.81
LMBR1-211ENST00000444719 LRPPRCP42704 1394 aaKnown RBP32.59■■■□□ 2.81
LMBR1-211ENST00000444719 DCAF11Q8TEB1 546 aa32.59■■■□□ 2.81
LMBR1-211ENST00000444719 WAPLQ7Z5K2 1190 aa32.58■■■□□ 2.81
LMBR1-211ENST00000444719 COL16A1Q07092 1604 aaPredicted RBP32.57■■■□□ 2.8
LMBR1-211ENST00000444719 PHF23Q9BUL5 403 aaPredicted RBP32.56■■■□□ 2.8
LMBR1-211ENST00000444719 YTHDC2Q9H6S0 1430 aaKnown RBP32.55■■■□□ 2.8
LMBR1-211ENST00000444719 ABCC11Q96J66 1382 aa32.55■■■□□ 2.8
LMBR1-211ENST00000444719 LAMC1P11047 1609 aa32.55■■■□□ 2.8
LMBR1-211ENST00000444719 KNDC1Q76NI1 1749 aa32.54■■■□□ 2.8
LMBR1-211ENST00000444719 AHDC1Q5TGY3 1603 aaPredicted RBP32.54■■■□□ 2.8
LMBR1-211ENST00000444719 TECPR2O15040 1411 aa32.52■■■□□ 2.8
LMBR1-211ENST00000444719 PLEKHH1Q9ULM0 1364 aa32.51■■■□□ 2.79
LMBR1-211ENST00000444719 C1orf167Q5SNV9 1468 aa32.5■■■□□ 2.79
LMBR1-211ENST00000444719 DHX57Q6P158 1386 aaKnown RBP32.5■■■□□ 2.79
LMBR1-211ENST00000444719 JCADQ9P266 1359 aa32.5■■■□□ 2.79
LMBR1-211ENST00000444719 DDX17Q92841 729 aaKnown RBP32.49■■■□□ 2.79
LMBR1-211ENST00000444719 ORAI2Q96SN7 254 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms