RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 CHGAP10645 457 aaKnown RBP32.67■■■□□ 2.82
TRAF4-205ENST00000444415 CPS1P31327 1500 aa32.67■■■□□ 2.82
TRAF4-205ENST00000444415 FOXD1Q16676 465 aa32.66■■■□□ 2.82
TRAF4-205ENST00000444415 KIF1BO60333 1816 aa32.63■■■□□ 2.81
TRAF4-205ENST00000444415 MPHOSPH9Q99550 1183 aa32.63■■■□□ 2.81
TRAF4-205ENST00000444415 PLEKHG1Q9ULL1 1385 aa32.61■■■□□ 2.81
TRAF4-205ENST00000444415 NUTM2DQ5VT03 806 aaPredicted RBP32.59■■■□□ 2.81
TRAF4-205ENST00000444415 SLC26A8Q96RN1 970 aa32.58■■■□□ 2.81
TRAF4-205ENST00000444415 NEXMIFQ5QGS0 1516 aa32.57■■■□□ 2.8
TRAF4-205ENST00000444415 SENP3Q9H4L4 574 aaPredicted RBP32.56■■■□□ 2.8
TRAF4-205ENST00000444415 LRRC7Q96NW7 1537 aa32.56■■■□□ 2.8
TRAF4-205ENST00000444415 NRXN3Q9Y4C0 1643 aa32.55■■■□□ 2.8
TRAF4-205ENST00000444415 ADAMTS13Q76LX8 1427 aa32.55■■■□□ 2.8
TRAF4-205ENST00000444415 XIRP1Q702N8 1843 aaKnown RBP32.54■■■□□ 2.8
TRAF4-205ENST00000444415 NWD1Q149M9 1564 aa32.52■■■□□ 2.8
TRAF4-205ENST00000444415 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.52■■■□□ 2.8
TRAF4-205ENST00000444415 PPP1R15AO75807 674 aaPredicted RBP32.51■■■□□ 2.79
TRAF4-205ENST00000444415 HDGFP51858 240 aaKnown RBP32.49■■■□□ 2.79
TRAF4-205ENST00000444415 CHD2O14647 1828 aaKnown RBP32.49■■■□□ 2.79
TRAF4-205ENST00000444415 ACIN1Q9UKV3 1341 aaKnown RBP32.49■■■□□ 2.79
TRAF4-205ENST00000444415 ALKQ9UM73 1620 aa32.48■■■□□ 2.79
TRAF4-205ENST00000444415 SETBP1Q9Y6X0 1596 aa32.47■■■□□ 2.79
TRAF4-205ENST00000444415 DIP2AQ14689 1571 aa32.46■■■□□ 2.79
TRAF4-205ENST00000444415 ZNF326Q5BKZ1 582 aaKnown RBP32.46■■■□□ 2.79
TRAF4-205ENST00000444415 PPLO60437 1756 aa32.45■■■□□ 2.79
TRAF4-205ENST00000444415 CCDC144AA2RUR9 1427 aa32.44■■■□□ 2.78
TRAF4-205ENST00000444415 HRCP23327 699 aa32.44■■■□□ 2.78
TRAF4-205ENST00000444415 SPATA31E1Q6ZUB1 1445 aa32.43■■■□□ 2.78
TRAF4-205ENST00000444415 KCNA6P17658 529 aa32.42■■■□□ 2.78
TRAF4-205ENST00000444415 BCANQ96GW7 911 aa32.42■■■□□ 2.78
TRAF4-205ENST00000444415 TBX22Q9Y458 520 aa32.42■■■□□ 2.78
TRAF4-205ENST00000444415 NKTRP30414 1462 aaKnown RBP32.39■■■□□ 2.78
TRAF4-205ENST00000444415 IFT172Q9UG01 1749 aa32.39■■■□□ 2.78
TRAF4-205ENST00000444415 UBAP1LF5GYI3 381 aa32.37■■■□□ 2.77
TRAF4-205ENST00000444415 SETD1AO15047 1707 aaKnown RBP32.37■■■□□ 2.77
TRAF4-205ENST00000444415 PTPRUQ92729 1446 aa32.36■■■□□ 2.77
TRAF4-205ENST00000444415 TMEM94Q12767 1356 aa32.33■■■□□ 2.77
TRAF4-205ENST00000444415 ANKRD30BQ9BXX2 1392 aa32.33■■■□□ 2.77
TRAF4-205ENST00000444415 PIK3R4Q99570 1358 aa32.32■■■□□ 2.76
TRAF4-205ENST00000444415 RPGRIP1LQ68CZ1 1315 aa32.31■■■□□ 2.76
TRAF4-205ENST00000444415 XRN1Q8IZH2 1706 aaKnown RBP32.31■■■□□ 2.76
TRAF4-205ENST00000444415 RBM33Q96EV2 1170 aaKnown RBP32.3■■■□□ 2.76
TRAF4-205ENST00000444415 METP08581 1390 aa32.29■■■□□ 2.76
TRAF4-205ENST00000444415 RGL3Q3MIN7 710 aa32.25■■■□□ 2.75
TRAF4-205ENST00000444415 VGFO15240 615 aaPredicted RBP32.24■■■□□ 2.75
TRAF4-205ENST00000444415 PROSER2Q86WR7 435 aaPredicted RBP32.24■■■□□ 2.75
TRAF4-205ENST00000444415 TOM1O60784 492 aa32.23■■■□□ 2.75
TRAF4-205ENST00000444415 ADGRF5Q8IZF2 1346 aa32.22■■■□□ 2.75
TRAF4-205ENST00000444415 AMOTL2Q9Y2J4 779 aa32.21■■■□□ 2.75
TRAF4-205ENST00000444415 PIP4K2BP78356 416 aa32.18■■■□□ 2.74
TRAF4-205ENST00000444415 PIK3C2GO75747 1445 aa32.14■■■□□ 2.74
TRAF4-205ENST00000444415 NRXN1Q9ULB1 1477 aa32.14■■■□□ 2.74
TRAF4-205ENST00000444415 ASXL1Q8IXJ9 1541 aa32.13■■■□□ 2.73
TRAF4-205ENST00000444415 NCOA3Q9Y6Q9 1424 aa32.13■■■□□ 2.73
TRAF4-205ENST00000444415 SCAF1Q9H7N4 1312 aaKnown RBP32.12■■■□□ 2.73
TRAF4-205ENST00000444415 MYOM2P54296 1465 aa32.11■■■□□ 2.73
TRAF4-205ENST00000444415 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.11■■■□□ 2.73
TRAF4-205ENST00000444415 PRAG1Q86YV5 1406 aa32.1■■■□□ 2.73
TRAF4-205ENST00000444415 MSH6P52701 1360 aa32.08■■■□□ 2.73
TRAF4-205ENST00000444415 HSPA1LP34931 641 aa32.05■■■□□ 2.72
TRAF4-205ENST00000444415 PTCH1Q13635 1447 aa32.05■■■□□ 2.72
TRAF4-205ENST00000444415 NALCNQ8IZF0 1738 aa32.05■■■□□ 2.72
TRAF4-205ENST00000444415 TRIM26Q12899 539 aaPredicted RBP32.04■■■□□ 2.72
TRAF4-205ENST00000444415 ROBO2Q9HCK4 1378 aa32.04■■■□□ 2.72
TRAF4-205ENST00000444415 ROBO1Q9Y6N7 1651 aa32.03■■■□□ 2.72
TRAF4-205ENST00000444415 DHX57Q6P158 1386 aaKnown RBP32.03■■■□□ 2.72
TRAF4-205ENST00000444415 FAM135BQ49AJ0 1406 aa32■■■□□ 2.71
TRAF4-205ENST00000444415 LAMC1P11047 1609 aa31.99■■■□□ 2.71
TRAF4-205ENST00000444415 KNDC1Q76NI1 1749 aa31.98■■■□□ 2.71
TRAF4-205ENST00000444415 C19orf44Q9H6X5 657 aa31.97■■■□□ 2.71
TRAF4-205ENST00000444415 TECPR2O15040 1411 aa31.97■■■□□ 2.71
TRAF4-205ENST00000444415 ADGRL3Q9HAR2 1447 aa31.97■■■□□ 2.71
TRAF4-205ENST00000444415 DCCP43146 1447 aa31.95■■■□□ 2.71
TRAF4-205ENST00000444415 TMEM132EQ6IEE7 984 aa31.95■■■□□ 2.7
TRAF4-205ENST00000444415 C14orf37Q86TY3 774 aa31.95■■■□□ 2.7
TRAF4-205ENST00000444415 C14orf93Q9H972 538 aaKnown RBP31.95■■■□□ 2.7
TRAF4-205ENST00000444415 CFAP70Q5T0N1 1121 aa31.93■■■□□ 2.7
TRAF4-205ENST00000444415 SLAIN2Q9P270 581 aa31.93■■■□□ 2.7
TRAF4-205ENST00000444415 LRPPRCP42704 1394 aaKnown RBP31.93■■■□□ 2.7
TRAF4-205ENST00000444415 DCAF11Q8TEB1 546 aa31.91■■■□□ 2.7
TRAF4-205ENST00000444415 ADGRB1O14514 1584 aa31.91■■■□□ 2.7
TRAF4-205ENST00000444415 YTHDC2Q9H6S0 1430 aaKnown RBP31.9■■■□□ 2.7
TRAF4-205ENST00000444415 CADPS2Q86UW7 1296 aa31.89■■■□□ 2.7
TRAF4-205ENST00000444415 ABCC11Q96J66 1382 aa31.89■■■□□ 2.69
TRAF4-205ENST00000444415 MST1RQ04912 1400 aa31.88■■■□□ 2.69
TRAF4-205ENST00000444415 KDM2AQ9Y2K7 1162 aa31.88■■■□□ 2.69
TRAF4-205ENST00000444415 ATF3P18847 181 aa31.85■■■□□ 2.69
TRAF4-205ENST00000444415 STK26Q9P289 416 aa31.85■■■□□ 2.69
TRAF4-205ENST00000444415 PLEKHH1Q9ULM0 1364 aa31.85■■■□□ 2.69
TRAF4-205ENST00000444415 SIN3AQ96ST3 1273 aa31.83■■■□□ 2.69
TRAF4-205ENST00000444415 WAPLQ7Z5K2 1190 aa31.81■■■□□ 2.68
TRAF4-205ENST00000444415 PHLPP1O60346 1717 aa31.8■■■□□ 2.68
TRAF4-205ENST00000444415 STAC3Q96MF2 364 aa31.79■■■□□ 2.68
TRAF4-205ENST00000444415 CDC42BPGQ6DT37 1551 aa31.79■■■□□ 2.68
TRAF4-205ENST00000444415 COL16A1Q07092 1604 aaPredicted RBP31.78■■■□□ 2.68
TRAF4-205ENST00000444415 AHDC1Q5TGY3 1603 aaPredicted RBP31.77■■■□□ 2.68
TRAF4-205ENST00000444415 BRINP3Q76B58 766 aa31.77■■■□□ 2.68
TRAF4-205ENST00000444415 DLC1Q96QB1 1528 aa31.76■■■□□ 2.68
TRAF4-205ENST00000444415 C1orf167Q5SNV9 1468 aa31.74■■■□□ 2.67
TRAF4-205ENST00000444415 KIAA1210Q9ULL0 1709 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms