RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 ZNF326Q5BKZ1 582 aaKnown RBP26.81■■□□□ 1.88
LRCH1-204ENST00000443945 LTBP4Q8N2S1 1624 aa26.8■■□□□ 1.88
LRCH1-204ENST00000443945 PPP1R15AO75807 674 aaPredicted RBP26.8■■□□□ 1.88
LRCH1-204ENST00000443945 BCANQ96GW7 911 aa26.78■■□□□ 1.88
LRCH1-204ENST00000443945 SLC26A8Q96RN1 970 aa26.78■■□□□ 1.88
LRCH1-204ENST00000443945 ACIN1Q9UKV3 1341 aaKnown RBP26.78■■□□□ 1.88
LRCH1-204ENST00000443945 CERKQ8TCT0 537 aa26.78■■□□□ 1.88
LRCH1-204ENST00000443945 KIF1BO60333 1816 aa26.76■■□□□ 1.87
LRCH1-204ENST00000443945 HRCP23327 699 aa26.76■■□□□ 1.87
LRCH1-204ENST00000443945 CCDC144AA2RUR9 1427 aa26.75■■□□□ 1.87
LRCH1-204ENST00000443945 HDGFP51858 240 aaKnown RBP26.71■■□□□ 1.87
LRCH1-204ENST00000443945 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.71■■□□□ 1.87
LRCH1-204ENST00000443945 PLEKHG1Q9ULL1 1385 aa26.71■■□□□ 1.87
LRCH1-204ENST00000443945 RGL3Q3MIN7 710 aa26.69■■□□□ 1.86
LRCH1-204ENST00000443945 STRCP1A6NGW2 1772 aa26.69■■□□□ 1.86
LRCH1-204ENST00000443945 NEXMIFQ5QGS0 1516 aa26.68■■□□□ 1.86
LRCH1-204ENST00000443945 ANKRD30BQ9BXX2 1392 aa26.65■■□□□ 1.86
LRCH1-204ENST00000443945 SPATA31E1Q6ZUB1 1445 aa26.63■■□□□ 1.85
LRCH1-204ENST00000443945 ADAMTS13Q76LX8 1427 aa26.63■■□□□ 1.85
LRCH1-204ENST00000443945 ILDR1Q86SU0 546 aaPredicted RBP26.63■■□□□ 1.85
LRCH1-204ENST00000443945 CPS1P31327 1500 aa26.6■■□□□ 1.85
LRCH1-204ENST00000443945 NRXN3Q9Y4C0 1643 aa26.59■■□□□ 1.85
LRCH1-204ENST00000443945 FBXO41Q8TF61 875 aa26.58■■□□□ 1.84
LRCH1-204ENST00000443945 RBM33Q96EV2 1170 aaKnown RBP26.58■■□□□ 1.84
LRCH1-204ENST00000443945 PPLO60437 1756 aa26.57■■□□□ 1.84
LRCH1-204ENST00000443945 TBX22Q9Y458 520 aa26.56■■□□□ 1.84
LRCH1-204ENST00000443945 LRRC7Q96NW7 1537 aa26.55■■□□□ 1.84
LRCH1-204ENST00000443945 PCGF6Q9BYE7 350 aa26.55■■□□□ 1.84
LRCH1-204ENST00000443945 RPGRIP1LQ68CZ1 1315 aa26.55■■□□□ 1.84
LRCH1-204ENST00000443945 VGFO15240 615 aaPredicted RBP26.54■■□□□ 1.84
LRCH1-204ENST00000443945 KCNA6P17658 529 aa26.54■■□□□ 1.84
LRCH1-204ENST00000443945 SETBP1Q9Y6X0 1596 aa26.54■■□□□ 1.84
LRCH1-204ENST00000443945 ADGRF5Q8IZF2 1346 aa26.53■■□□□ 1.84
LRCH1-204ENST00000443945 DIP2AQ14689 1571 aa26.51■■□□□ 1.83
LRCH1-204ENST00000443945 METP08581 1390 aa26.51■■□□□ 1.83
LRCH1-204ENST00000443945 CHD2O14647 1828 aaKnown RBP26.5■■□□□ 1.83
LRCH1-204ENST00000443945 IFT172Q9UG01 1749 aa26.5■■□□□ 1.83
LRCH1-204ENST00000443945 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
LRCH1-204ENST00000443945 PTPRUQ92729 1446 aa26.49■■□□□ 1.83
LRCH1-204ENST00000443945 NWD1Q149M9 1564 aa26.49■■□□□ 1.83
LRCH1-204ENST00000443945 PROSER2Q86WR7 435 aaPredicted RBP26.48■■□□□ 1.83
LRCH1-204ENST00000443945 UBAP1LF5GYI3 381 aa26.48■■□□□ 1.83
LRCH1-204ENST00000443945 TMEM94Q12767 1356 aa26.47■■□□□ 1.83
LRCH1-204ENST00000443945 DHX57Q6P158 1386 aaKnown RBP26.46■■□□□ 1.83
LRCH1-204ENST00000443945 XIRP1Q702N8 1843 aaKnown RBP26.46■■□□□ 1.83
LRCH1-204ENST00000443945 AMOTL2Q9Y2J4 779 aa26.45■■□□□ 1.83
LRCH1-204ENST00000443945 ALKQ9UM73 1620 aa26.44■■□□□ 1.82
LRCH1-204ENST00000443945 NKTRP30414 1462 aaKnown RBP26.43■■□□□ 1.82
LRCH1-204ENST00000443945 KDM2AQ9Y2K7 1162 aa26.42■■□□□ 1.82
LRCH1-204ENST00000443945 PIK3R4Q99570 1358 aa26.42■■□□□ 1.82
LRCH1-204ENST00000443945 SETD1AO15047 1707 aaKnown RBP26.42■■□□□ 1.82
LRCH1-204ENST00000443945 SIN3AQ96ST3 1273 aa26.42■■□□□ 1.82
LRCH1-204ENST00000443945 SLC24A1O60721 1099 aa26.4■■□□□ 1.82
LRCH1-204ENST00000443945 DCAF11Q8TEB1 546 aa26.4■■□□□ 1.82
LRCH1-204ENST00000443945 PIK3C2GO75747 1445 aa26.39■■□□□ 1.82
LRCH1-204ENST00000443945 PIP4K2BP78356 416 aa26.38■■□□□ 1.81
LRCH1-204ENST00000443945 SCAF1Q9H7N4 1312 aaKnown RBP26.38■■□□□ 1.81
LRCH1-204ENST00000443945 XRN1Q8IZH2 1706 aaKnown RBP26.37■■□□□ 1.81
LRCH1-204ENST00000443945 NEUROD1Q13562 356 aa26.36■■□□□ 1.81
LRCH1-204ENST00000443945 TMEM132EQ6IEE7 984 aa26.36■■□□□ 1.81
LRCH1-204ENST00000443945 MYOM2P54296 1465 aa26.36■■□□□ 1.81
LRCH1-204ENST00000443945 TOM1O60784 492 aa26.34■■□□□ 1.81
LRCH1-204ENST00000443945 CFAP70Q5T0N1 1121 aa26.34■■□□□ 1.81
LRCH1-204ENST00000443945 C14orf37Q86TY3 774 aa26.34■■□□□ 1.81
LRCH1-204ENST00000443945 NRXN1Q9ULB1 1477 aa26.33■■□□□ 1.81
LRCH1-204ENST00000443945 ASXL1Q8IXJ9 1541 aa26.32■■□□□ 1.8
LRCH1-204ENST00000443945 STK26Q9P289 416 aa26.32■■□□□ 1.8
LRCH1-204ENST00000443945 ROBO2Q9HCK4 1378 aa26.29■■□□□ 1.8
LRCH1-204ENST00000443945 C14orf93Q9H972 538 aaKnown RBP26.29■■□□□ 1.8
LRCH1-204ENST00000443945 MSH6P52701 1360 aa26.28■■□□□ 1.8
LRCH1-204ENST00000443945 L3MBTL2Q969R5 705 aa26.24■■□□□ 1.79
LRCH1-204ENST00000443945 PTCH1Q13635 1447 aa26.22■■□□□ 1.79
LRCH1-204ENST00000443945 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.21■■□□□ 1.79
LRCH1-204ENST00000443945 YTHDC2Q9H6S0 1430 aaKnown RBP26.21■■□□□ 1.79
LRCH1-204ENST00000443945 C19orf44Q9H6X5 657 aa26.21■■□□□ 1.79
LRCH1-204ENST00000443945 LAMC1P11047 1609 aa26.21■■□□□ 1.79
LRCH1-204ENST00000443945 LRPPRCP42704 1394 aaKnown RBP26.2■■□□□ 1.79
LRCH1-204ENST00000443945 NCOA3Q9Y6Q9 1424 aa26.2■■□□□ 1.79
LRCH1-204ENST00000443945 WAPLQ7Z5K2 1190 aa26.2■■□□□ 1.78
LRCH1-204ENST00000443945 NALCNQ8IZF0 1738 aa26.19■■□□□ 1.78
LRCH1-204ENST00000443945 PLEKHH1Q9ULM0 1364 aa26.18■■□□□ 1.78
LRCH1-204ENST00000443945 ATF3P18847 181 aa26.17■■□□□ 1.78
LRCH1-204ENST00000443945 HSPA1LP34931 641 aa26.17■■□□□ 1.78
LRCH1-204ENST00000443945 STAC3Q96MF2 364 aa26.17■■□□□ 1.78
LRCH1-204ENST00000443945 ADGRB1O14514 1584 aa26.16■■□□□ 1.78
LRCH1-204ENST00000443945 PRAG1Q86YV5 1406 aa26.16■■□□□ 1.78
LRCH1-204ENST00000443945 ADGRL3Q9HAR2 1447 aa26.16■■□□□ 1.78
LRCH1-204ENST00000443945 ABCC11Q96J66 1382 aa26.16■■□□□ 1.78
LRCH1-204ENST00000443945 SLAIN2Q9P270 581 aa26.16■■□□□ 1.78
LRCH1-204ENST00000443945 TECPR2O15040 1411 aa26.15■■□□□ 1.78
LRCH1-204ENST00000443945 SAFB2Q14151 953 aaKnown RBP eCLIP26.13■■□□□ 1.77
LRCH1-204ENST00000443945 CADPS2Q86UW7 1296 aa26.13■■□□□ 1.77
LRCH1-204ENST00000443945 TRAK1Q9UPV9 953 aa26.13■■□□□ 1.77
LRCH1-204ENST00000443945 KNDC1Q76NI1 1749 aa26.12■■□□□ 1.77
LRCH1-204ENST00000443945 ROBO1Q9Y6N7 1651 aa26.12■■□□□ 1.77
LRCH1-204ENST00000443945 NBPF1Q3BBV0 1214 aa26.11■■□□□ 1.77
LRCH1-204ENST00000443945 PRAM1Q96QH2 718 aa26.1■■□□□ 1.77
LRCH1-204ENST00000443945 DCCP43146 1447 aa26.08■■□□□ 1.77
LRCH1-204ENST00000443945 FAM135BQ49AJ0 1406 aa26.08■■□□□ 1.77
LRCH1-204ENST00000443945 TONSLQ96HA7 1378 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms