RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 GGT6Q6P531 493 aa21.81■■□□□ 1.08
PMS1-213ENST00000441310 CHGAP10645 457 aaKnown RBP21.79■■□□□ 1.08
PMS1-213ENST00000441310 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
PMS1-213ENST00000441310 HSP90AA1P07900 732 aaKnown RBP21.79■■□□□ 1.08
PMS1-213ENST00000441310 RTEL1-TNFRSF6BF6WH68 1400 aa21.79■■□□□ 1.08
PMS1-213ENST00000441310 FAM161AQ3B820 660 aa21.78■■□□□ 1.08
PMS1-213ENST00000441310 PNNQ9H307 717 aaKnown RBP21.78■■□□□ 1.08
PMS1-213ENST00000441310 RAPGEF3O95398 923 aa21.78■■□□□ 1.08
PMS1-213ENST00000441310 ATP7AQ04656 1500 aa21.78■■□□□ 1.08
PMS1-213ENST00000441310 KANK1Q14678 1352 aa21.77■■□□□ 1.08
PMS1-213ENST00000441310 ARID4BQ4LE39 1312 aaPredicted RBP21.77■■□□□ 1.08
PMS1-213ENST00000441310 C8orf34Q49A92 452 aa21.77■■□□□ 1.08
PMS1-213ENST00000441310 MAGI2Q86UL8 1455 aa21.76■■□□□ 1.07
PMS1-213ENST00000441310 CD109Q6YHK3 1445 aa21.76■■□□□ 1.07
PMS1-213ENST00000441310 LRPPRCP42704 1394 aaKnown RBP21.76■■□□□ 1.07
PMS1-213ENST00000441310 RGS3P49796 1198 aa21.76■■□□□ 1.07
PMS1-213ENST00000441310 POLR1AO95602 1720 aaPredicted RBP21.76■■□□□ 1.07
PMS1-213ENST00000441310 CC2D1BQ5T0F9 858 aaKnown RBP21.75■■□□□ 1.07
PMS1-213ENST00000441310 TESK2Q96S53 571 aa21.75■■□□□ 1.07
PMS1-213ENST00000441310 ABCA9Q8IUA7 1624 aa21.74■■□□□ 1.07
PMS1-213ENST00000441310 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
PMS1-213ENST00000441310 C20orf194Q5TEA3 1177 aa21.74■■□□□ 1.07
PMS1-213ENST00000441310 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
PMS1-213ENST00000441310 L1TD1Q5T7N2 865 aaKnown RBP21.73■■□□□ 1.07
PMS1-213ENST00000441310 ATP10AO60312 1499 aa21.73■■□□□ 1.07
PMS1-213ENST00000441310 ARAP3Q8WWN8 1544 aa21.72■■□□□ 1.07
PMS1-213ENST00000441310 RRP9O43818 475 aaKnown RBP21.72■■□□□ 1.07
PMS1-213ENST00000441310 TRPM1Q7Z4N2 1603 aa21.72■■□□□ 1.07
PMS1-213ENST00000441310 E9PCH4 1651 aa21.72■■□□□ 1.07
PMS1-213ENST00000441310 SLKQ9H2G2 1235 aaPredicted RBP21.71■■□□□ 1.07
PMS1-213ENST00000441310 PODXL2Q9NZ53 605 aa21.71■■□□□ 1.07
PMS1-213ENST00000441310 PLEKHG5O94827 1062 aa21.7■■□□□ 1.07
PMS1-213ENST00000441310 PANK3Q9H999 370 aa21.7■■□□□ 1.07
PMS1-213ENST00000441310 KTN1Q86UP2 1357 aaKnown RBP21.7■■□□□ 1.06
PMS1-213ENST00000441310 PDE3BQ13370 1112 aa21.7■■□□□ 1.06
PMS1-213ENST00000441310 MYBBP1AQ9BQG0 1328 aaKnown RBP21.69■■□□□ 1.06
PMS1-213ENST00000441310 TMF1P82094 1093 aa21.68■■□□□ 1.06
PMS1-213ENST00000441310 CFAP65Q6ZU64 1925 aaKnown RBP21.68■■□□□ 1.06
PMS1-213ENST00000441310 UGGT1Q9NYU2 1555 aa21.68■■□□□ 1.06
PMS1-213ENST00000441310 BRD4O60885 1362 aaPredicted RBP21.68■■□□□ 1.06
PMS1-213ENST00000441310 GPRASP1Q5JY77 1395 aa21.67■■□□□ 1.06
PMS1-213ENST00000441310 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
PMS1-213ENST00000441310 KDM2BQ8NHM5 1336 aa21.67■■□□□ 1.06
PMS1-213ENST00000441310 CENPQQ7L2Z9 268 aaPredicted RBP21.66■■□□□ 1.06
PMS1-213ENST00000441310 INO80Q9ULG1 1556 aaPredicted RBP21.65■■□□□ 1.06
PMS1-213ENST00000441310 NUTM2DQ5VT03 806 aaPredicted RBP21.64■■□□□ 1.05
PMS1-213ENST00000441310 ADGRF5Q8IZF2 1346 aa21.64■■□□□ 1.05
PMS1-213ENST00000441310 PER1O15534 1290 aaPredicted RBP21.63■■□□□ 1.05
PMS1-213ENST00000441310 PANK2Q9BZ23 570 aa21.63■■□□□ 1.05
PMS1-213ENST00000441310 XRCC6P12956 609 aaKnown RBP eCLIP21.63■■□□□ 1.05
PMS1-213ENST00000441310 CLCN1P35523 988 aa21.63■■□□□ 1.05
PMS1-213ENST00000441310 ZNF518AQ6AHZ1 1483 aa21.62■■□□□ 1.05
PMS1-213ENST00000441310 CLTCL1P53675 1640 aa21.62■■□□□ 1.05
PMS1-213ENST00000441310 RALBP1Q15311 655 aa21.61■■□□□ 1.05
PMS1-213ENST00000441310 PTPRTO14522 1441 aa21.61■■□□□ 1.05
PMS1-213ENST00000441310 GZF1Q9H116 711 aaPredicted RBP21.61■■□□□ 1.05
PMS1-213ENST00000441310 KIDINS220Q9ULH0 1771 aa21.6■■□□□ 1.05
PMS1-213ENST00000441310 TRPM2O94759 1503 aa21.6■■□□□ 1.05
PMS1-213ENST00000441310 GOLGA6L3A6NEY3 463 aa21.59■■□□□ 1.05
PMS1-213ENST00000441310 PRDM15P57071 1507 aaPredicted RBP21.58■■□□□ 1.05
PMS1-213ENST00000441310 SPHKAPQ2M3C7 1700 aa21.57■■□□□ 1.04
PMS1-213ENST00000441310 COL17A1Q9UMD9 1497 aaPredicted RBP21.57■■□□□ 1.04
PMS1-213ENST00000441310 POGZQ7Z3K3 1410 aa21.56■■□□□ 1.04
PMS1-213ENST00000441310 TET3O43151 1660 aa21.56■■□□□ 1.04
PMS1-213ENST00000441310 NLRP13Q86W25 1043 aa21.55■■□□□ 1.04
PMS1-213ENST00000441310 DEPDC5O75140 1603 aa21.55■■□□□ 1.04
PMS1-213ENST00000441310 MROH1Q8NDA8 1641 aa21.54■■□□□ 1.04
PMS1-213ENST00000441310 EIF2AK4Q9P2K8 1649 aaKnown RBP21.54■■□□□ 1.04
PMS1-213ENST00000441310 BECN1Q14457 450 aa21.53■■□□□ 1.04
PMS1-213ENST00000441310 TMEM132EQ6IEE7 984 aa21.53■■□□□ 1.04
PMS1-213ENST00000441310 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.04
PMS1-213ENST00000441310 KNSTRNQ9Y448 316 aa21.52■■□□□ 1.04
PMS1-213ENST00000441310 MADDQ8WXG6 1647 aa21.52■■□□□ 1.03
PMS1-213ENST00000441310 TRAK1Q9UPV9 953 aa21.51■■□□□ 1.03
PMS1-213ENST00000441310 VWDEQ8N2E2 1590 aa21.51■■□□□ 1.03
PMS1-213ENST00000441310 USP19O94966 1318 aa21.51■■□□□ 1.03
PMS1-213ENST00000441310 SEC24BO95487 1268 aa21.51■■□□□ 1.03
PMS1-213ENST00000441310 PARD3Q8TEW0 1356 aa21.49■■□□□ 1.03
PMS1-213ENST00000441310 SPRYD3Q8NCJ5 442 aa21.49■■□□□ 1.03
PMS1-213ENST00000441310 NPATQ14207 1427 aa21.49■■□□□ 1.03
PMS1-213ENST00000441310 CEP152O94986 1710 aa21.48■■□□□ 1.03
PMS1-213ENST00000441310 NOS1P29475 1434 aa21.48■■□□□ 1.03
PMS1-213ENST00000441310 SCAF11Q99590 1463 aaKnown RBP21.48■■□□□ 1.03
PMS1-213ENST00000441310 PPRC1Q5VV67 1664 aaKnown RBP21.47■■□□□ 1.03
PMS1-213ENST00000441310 EFCAB6Q5THR3 1501 aa21.47■■□□□ 1.03
PMS1-213ENST00000441310 FSD2A1L4K1 749 aa21.46■■□□□ 1.03
PMS1-213ENST00000441310 MLH3Q9UHC1 1453 aa21.45■■□□□ 1.03
PMS1-213ENST00000441310 STAC3Q96MF2 364 aa21.45■■□□□ 1.02
PMS1-213ENST00000441310 FRMPD1Q5SYB0 1578 aa21.45■■□□□ 1.02
PMS1-213ENST00000441310 YEATS2Q9ULM3 1422 aa21.44■■□□□ 1.02
PMS1-213ENST00000441310 ANTXR1Q9H6X2 564 aa21.44■■□□□ 1.02
PMS1-213ENST00000441310 ESPNB1AK53 854 aa21.43■■□□□ 1.02
PMS1-213ENST00000441310 CDCA8Q53HL2 280 aa21.43■■□□□ 1.02
PMS1-213ENST00000441310 LAMC1P11047 1609 aa21.43■■□□□ 1.02
PMS1-213ENST00000441310 SAFB2Q14151 953 aaKnown RBP eCLIP21.42■■□□□ 1.02
PMS1-213ENST00000441310 RNF17Q9BXT8 1623 aaKnown RBP21.42■■□□□ 1.02
PMS1-213ENST00000441310 ERBB4Q15303 1308 aa21.42■■□□□ 1.02
PMS1-213ENST00000441310 HECW2Q9P2P5 1572 aa21.42■■□□□ 1.02
PMS1-213ENST00000441310 A0A0U1RQG5 324 aaPredicted RBP21.41■■□□□ 1.02
PMS1-213ENST00000441310 MYH16Q9H6N6 1097 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms