RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 ANKLE2Q86XL3 938 aa8.69□□□□□ -1.02
PUM1-207ENST00000440538 E9PCH4 1651 aa8.68□□□□□ -1.02
PUM1-207ENST00000440538 RIMS1Q86UR5 1692 aaKnown RBP8.68□□□□□ -1.02
PUM1-207ENST00000440538 ERVK-7P63135 1459 aa8.68□□□□□ -1.02
PUM1-207ENST00000440538 EFCAB6Q5THR3 1501 aa8.67□□□□□ -1.02
PUM1-207ENST00000440538 UNC13BO14795 1591 aa8.67□□□□□ -1.02
PUM1-207ENST00000440538 HDGFP51858 240 aaKnown RBP8.67□□□□□ -1.02
PUM1-207ENST00000440538 IQGAP3Q86VI3 1631 aa8.67□□□□□ -1.02
PUM1-207ENST00000440538 PTPRMP28827 1452 aa8.67□□□□□ -1.02
PUM1-207ENST00000440538 SENP3-EIF4A1A0A087X0R7 540 aa8.66□□□□□ -1.02
PUM1-207ENST00000440538 PRAM1Q96QH2 718 aa8.66□□□□□ -1.02
PUM1-207ENST00000440538 CNTLNQ9NXG0 1405 aa8.66□□□□□ -1.02
PUM1-207ENST00000440538 RIMS2Q9UQ26 1411 aa8.66□□□□□ -1.02
PUM1-207ENST00000440538 SRPK2P78362 688 aaKnown RBP8.65□□□□□ -1.02
PUM1-207ENST00000440538 CAMSAP1Q5T5Y3 1602 aa8.65□□□□□ -1.03
PUM1-207ENST00000440538 AGLP35573 1532 aa8.65□□□□□ -1.03
PUM1-207ENST00000440538 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.03
PUM1-207ENST00000440538 CLTCL1P53675 1640 aa8.64□□□□□ -1.03
PUM1-207ENST00000440538 UHRF1BP1Q6BDS2 1440 aa8.64□□□□□ -1.03
PUM1-207ENST00000440538 C11orf95C9JLR9 678 aaPredicted RBP8.64□□□□□ -1.03
PUM1-207ENST00000440538 TET3O43151 1660 aa8.64□□□□□ -1.03
PUM1-207ENST00000440538 USP47Q96K76 1375 aa8.64□□□□□ -1.03
PUM1-207ENST00000440538 EIF2AK4Q9P2K8 1649 aaKnown RBP8.64□□□□□ -1.03
PUM1-207ENST00000440538 SOX12O15370 315 aa8.63□□□□□ -1.03
PUM1-207ENST00000440538 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.032e-7■□□□□ 10.7
PUM1-207ENST00000440538 AMOTL2Q9Y2J4 779 aa8.63□□□□□ -1.03
PUM1-207ENST00000440538 PTPRTO14522 1441 aa8.63□□□□□ -1.03
PUM1-207ENST00000440538 FER1L4A9Z1Z3 1794 aa8.63□□□□□ -1.03
PUM1-207ENST00000440538 CABP2Q9NPB3 220 aa8.63□□□□□ -1.03
PUM1-207ENST00000440538 TIMELESSQ9UNS1 1208 aa8.63□□□□□ -1.03
PUM1-207ENST00000440538 RNF17Q9BXT8 1623 aaKnown RBP8.63□□□□□ -1.03
PUM1-207ENST00000440538 LMOD2Q6P5Q4 547 aa8.62□□□□□ -1.03
PUM1-207ENST00000440538 TMEM2Q9UHN6 1383 aa8.62□□□□□ -1.03
PUM1-207ENST00000440538 KCNA6P17658 529 aa8.62□□□□□ -1.03
PUM1-207ENST00000440538 TNNT2P45379 298 aaPredicted RBP8.62□□□□□ -1.03
PUM1-207ENST00000440538 SPATA31E1Q6ZUB1 1445 aa8.62□□□□□ -1.03
PUM1-207ENST00000440538 SYNMO15061 1565 aa8.62□□□□□ -1.03
PUM1-207ENST00000440538 MSH5O43196 834 aa8.61□□□□□ -1.03
PUM1-207ENST00000440538 PROSER2Q86WR7 435 aaPredicted RBP8.61□□□□□ -1.03
PUM1-207ENST00000440538 DEPDC5O75140 1603 aa8.61□□□□□ -1.03
PUM1-207ENST00000440538 TRPM2O94759 1503 aa8.61□□□□□ -1.03
PUM1-207ENST00000440538 BCORL1Q5H9F3 1711 aa8.61□□□□□ -1.03
PUM1-207ENST00000440538 C14orf93Q9H972 538 aaKnown RBP8.61□□□□□ -1.03
PUM1-207ENST00000440538 A2ML1A8K2U0 1454 aa8.6□□□□□ -1.03
PUM1-207ENST00000440538 ARHGAP31Q2M1Z3 1444 aa8.6□□□□□ -1.03
PUM1-207ENST00000440538 METP08581 1390 aa8.6□□□□□ -1.03
PUM1-207ENST00000440538 XPCQ01831 940 aaPredicted RBP8.6□□□□□ -1.03
PUM1-207ENST00000440538 VWDEQ8N2E2 1590 aa8.6□□□□□ -1.03
PUM1-207ENST00000440538 IRX6P78412 446 aaPredicted RBP8.6□□□□□ -1.03
PUM1-207ENST00000440538 SPHKAPQ2M3C7 1700 aa8.6□□□□□ -1.03
PUM1-207ENST00000440538 ZBTB7CA1YPR0 619 aa8.6□□□□□ -1.03
PUM1-207ENST00000440538 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
PUM1-207ENST00000440538 PRAG1Q86YV5 1406 aa8.59□□□□□ -1.03
PUM1-207ENST00000440538 RPGRIP1LQ68CZ1 1315 aa8.59□□□□□ -1.03
PUM1-207ENST00000440538 ZNF335Q9H4Z2 1342 aaPredicted RBP8.59□□□□□ -1.03
PUM1-207ENST00000440538 PREX1Q8TCU6 1659 aa8.59□□□□□ -1.03
PUM1-207ENST00000440538 PIK3C2BO00750 1634 aa8.59□□□□□ -1.03
PUM1-207ENST00000440538 LMTK2Q8IWU2 1503 aa8.58□□□□□ -1.04
PUM1-207ENST00000440538 CENPJQ9HC77 1338 aaPredicted RBP8.58□□□□□ -1.04
PUM1-207ENST00000440538 CC2D1BQ5T0F9 858 aaKnown RBP8.58□□□□□ -1.04
PUM1-207ENST00000440538 C3P01024 1663 aa8.58□□□□□ -1.04
PUM1-207ENST00000440538 PLEKHH1Q9ULM0 1364 aa8.58□□□□□ -1.04
PUM1-207ENST00000440538 TMF1P82094 1093 aa8.58□□□□□ -1.04
PUM1-207ENST00000440538 NUTM2GQ5VZR2 741 aa8.58□□□□□ -1.04
PUM1-207ENST00000440538 PAK3O75914 559 aaPredicted RBP8.57□□□□□ -1.04
PUM1-207ENST00000440538 PIP4K2BP78356 416 aa8.57□□□□□ -1.04
PUM1-207ENST00000440538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.57□□□□□ -1.042e-6■■□□□ 13.8
PUM1-207ENST00000440538 SLC12A5Q9H2X9 1139 aa8.57□□□□□ -1.04
PUM1-207ENST00000440538 WASHC2AQ641Q2 1341 aa8.56□□□□□ -1.04
PUM1-207ENST00000440538 REREQ9P2R6 1566 aa8.56□□□□□ -1.04
PUM1-207ENST00000440538 MROH2AA6NES4 1674 aa8.56□□□□□ -1.04
PUM1-207ENST00000440538 DDX17Q92841 729 aaKnown RBP8.56□□□□□ -1.04
PUM1-207ENST00000440538 KIF7Q2M1P5 1343 aa8.56□□□□□ -1.04
PUM1-207ENST00000440538 MYO5BQ9ULV0 1848 aa8.55□□□□□ -1.04
PUM1-207ENST00000440538 CDK19Q9BWU1 502 aa8.55□□□□□ -1.04
PUM1-207ENST00000440538 KIF1BO60333 1816 aa8.55□□□□□ -1.04
PUM1-207ENST00000440538 PPM1GO15355 546 aaPredicted RBP8.55□□□□□ -1.04
PUM1-207ENST00000440538 SPATA31D1Q6ZQQ2 1576 aa8.54□□□□□ -1.04
PUM1-207ENST00000440538 ESCO1Q5FWF5 840 aa8.54□□□□□ -1.04
PUM1-207ENST00000440538 PANK3Q9H999 370 aa8.54□□□□□ -1.04
PUM1-207ENST00000440538 NEFLP07196 543 aa8.54□□□□□ -1.04
PUM1-207ENST00000440538 CABP1Q9NZU7 370 aa8.54□□□□□ -1.04
PUM1-207ENST00000440538 NLRP1Q9C000 1473 aa8.54□□□□□ -1.04
PUM1-207ENST00000440538 DISP3Q9P2K9 1392 aa8.53□□□□□ -1.04
PUM1-207ENST00000440538 SCAF11Q99590 1463 aaKnown RBP8.53□□□□□ -1.04
PUM1-207ENST00000440538 NGDNQ8NEJ9 315 aaKnown RBP8.53□□□□□ -1.04
PUM1-207ENST00000440538 ADAMTSL3P82987 1691 aa8.53□□□□□ -1.04
PUM1-207ENST00000440538 ADGRB3O60242 1522 aa8.53□□□□□ -1.04
PUM1-207ENST00000440538 FBLN1P23142 703 aa8.52□□□□□ -1.04
PUM1-207ENST00000440538 ZC3H13Q5T200 1668 aaKnown RBP8.52□□□□□ -1.04
PUM1-207ENST00000440538 CEP170BQ9Y4F5 1589 aaPredicted RBP8.52□□□□□ -1.05
PUM1-207ENST00000440538 TBX22Q9Y458 520 aa8.52□□□□□ -1.05
PUM1-207ENST00000440538 NPHP4O75161 1426 aaPredicted RBP8.52□□□□□ -1.05
PUM1-207ENST00000440538 YTHDC2Q9H6S0 1430 aaKnown RBP8.52□□□□□ -1.05
PUM1-207ENST00000440538 ROBO2Q9HCK4 1378 aa8.52□□□□□ -1.05
PUM1-207ENST00000440538 FOXO3O43524 673 aa8.52□□□□□ -1.05
PUM1-207ENST00000440538 ATF3P18847 181 aa8.51□□□□□ -1.05
PUM1-207ENST00000440538 TESK2Q96S53 571 aa8.51□□□□□ -1.05
PUM1-207ENST00000440538 PIK3C2GO75747 1445 aa8.51□□□□□ -1.05
PUM1-207ENST00000440538 TMEM131LA2VDJ0 1609 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms