RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 RNF17Q9BXT8 1623 aaKnown RBP6.76□□□□□ -1.33
EDEM3-203ENST00000439962 RIMS2Q9UQ26 1411 aa6.76□□□□□ -1.33
EDEM3-203ENST00000439962 EFCAB6Q5THR3 1501 aa6.76□□□□□ -1.33
EDEM3-203ENST00000439962 NLRP1Q9C000 1473 aa6.75□□□□□ -1.33
EDEM3-203ENST00000439962 DDX17Q92841 729 aaKnown RBP6.75□□□□□ -1.33
EDEM3-203ENST00000439962 AMOTL2Q9Y2J4 779 aa6.75□□□□□ -1.33
EDEM3-203ENST00000439962 EIF2AK4Q9P2K8 1649 aaKnown RBP6.75□□□□□ -1.33
EDEM3-203ENST00000439962 SYNMO15061 1565 aa6.75□□□□□ -1.33
EDEM3-203ENST00000439962 ADGRF5Q8IZF2 1346 aa6.75□□□□□ -1.33
EDEM3-203ENST00000439962 SCAF11Q99590 1463 aaKnown RBP6.75□□□□□ -1.33
EDEM3-203ENST00000439962 HDGFP51858 240 aaKnown RBP6.75□□□□□ -1.33
EDEM3-203ENST00000439962 HIRIP3Q9BW71 556 aaPredicted RBP6.75□□□□□ -1.33
EDEM3-203ENST00000439962 MROH2AA6NES4 1674 aa6.75□□□□□ -1.33
EDEM3-203ENST00000439962 CCDC144AA2RUR9 1427 aa6.75□□□□□ -1.33
EDEM3-203ENST00000439962 E9PCH4 1651 aa6.74□□□□□ -1.33
EDEM3-203ENST00000439962 HSPA1LP34931 641 aa6.74□□□□□ -1.33
EDEM3-203ENST00000439962 WAPLQ7Z5K2 1190 aa6.74□□□□□ -1.33
EDEM3-203ENST00000439962 MYO5BQ9ULV0 1848 aa6.74□□□□□ -1.33
EDEM3-203ENST00000439962 SPATA31D1Q6ZQQ2 1576 aa6.74□□□□□ -1.33
EDEM3-203ENST00000439962 NOS1P29475 1434 aa6.74□□□□□ -1.33
EDEM3-203ENST00000439962 XPCQ01831 940 aaPredicted RBP6.74□□□□□ -1.33
EDEM3-203ENST00000439962 TMEM94Q12767 1356 aa6.74□□□□□ -1.33
EDEM3-203ENST00000439962 TOM1O60784 492 aa6.73□□□□□ -1.33
EDEM3-203ENST00000439962 CFAP70Q5T0N1 1121 aa6.73□□□□□ -1.33
EDEM3-203ENST00000439962 ARHGAP31Q2M1Z3 1444 aa6.73□□□□□ -1.33
EDEM3-203ENST00000439962 DEPDC5O75140 1603 aa6.73□□□□□ -1.33
EDEM3-203ENST00000439962 PLA2R1Q13018 1463 aa6.72□□□□□ -1.33
EDEM3-203ENST00000439962 TRAK1Q9UPV9 953 aa6.72□□□□□ -1.33
EDEM3-203ENST00000439962 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.72□□□□□ -1.33
EDEM3-203ENST00000439962 UBR1Q8IWV7 1749 aa6.72□□□□□ -1.33
EDEM3-203ENST00000439962 METP08581 1390 aa6.72□□□□□ -1.33
EDEM3-203ENST00000439962 ZC3H13Q5T200 1668 aaKnown RBP6.71□□□□□ -1.33
EDEM3-203ENST00000439962 VGFO15240 615 aaPredicted RBP6.71□□□□□ -1.33
EDEM3-203ENST00000439962 TET3O43151 1660 aa6.71□□□□□ -1.34
EDEM3-203ENST00000439962 NUTM2BA6NNL0 878 aaPredicted RBP6.71□□□□□ -1.34
EDEM3-203ENST00000439962 NUTM2EB1AL46 878 aaPredicted RBP6.71□□□□□ -1.34
EDEM3-203ENST00000439962 ATF3P18847 181 aa6.71□□□□□ -1.34
EDEM3-203ENST00000439962 LMOD2Q6P5Q4 547 aa6.71□□□□□ -1.34
EDEM3-203ENST00000439962 NUTM2AQ8IVF1 878 aaPredicted RBP6.71□□□□□ -1.34
EDEM3-203ENST00000439962 NEURL4Q96JN8 1562 aa6.71□□□□□ -1.34
EDEM3-203ENST00000439962 PTPRTO14522 1441 aa6.71□□□□□ -1.34
EDEM3-203ENST00000439962 UNC13BO14795 1591 aa6.7□□□□□ -1.34
EDEM3-203ENST00000439962 VWDEQ8N2E2 1590 aa6.7□□□□□ -1.34
EDEM3-203ENST00000439962 IQGAP3Q86VI3 1631 aa6.7□□□□□ -1.34
EDEM3-203ENST00000439962 EP400Q96L91 3159 aa6.7□□□□□ -1.34
EDEM3-203ENST00000439962 POLR1AO95602 1720 aaPredicted RBP6.7□□□□□ -1.34
EDEM3-203ENST00000439962 DISP3Q9P2K9 1392 aa6.69□□□□□ -1.34
EDEM3-203ENST00000439962 LMTK2Q8IWU2 1503 aa6.69□□□□□ -1.34
EDEM3-203ENST00000439962 IQGAP1P46940 1657 aa6.69□□□□□ -1.34
EDEM3-203ENST00000439962 RPRD2Q5VT52 1461 aaKnown RBP6.69□□□□□ -1.34
EDEM3-203ENST00000439962 ADGRB3O60242 1522 aa6.69□□□□□ -1.34
EDEM3-203ENST00000439962 CLTCL1P53675 1640 aa6.69□□□□□ -1.34
EDEM3-203ENST00000439962 POGKQ9P215 609 aa6.69□□□□□ -1.34
EDEM3-203ENST00000439962 SLAIN2Q9P270 581 aa6.69□□□□□ -1.34
EDEM3-203ENST00000439962 MINK1Q8N4C8 1332 aaPredicted RBP6.68□□□□□ -1.34
EDEM3-203ENST00000439962 ZNF142P52746 1687 aaPredicted RBP6.68□□□□□ -1.34
EDEM3-203ENST00000439962 NBPF1Q3BBV0 1214 aa6.68□□□□□ -1.34
EDEM3-203ENST00000439962 ORAI2Q96SN7 254 aa6.68□□□□□ -1.34
EDEM3-203ENST00000439962 TBX22Q9Y458 520 aa6.68□□□□□ -1.34
EDEM3-203ENST00000439962 ESCO1Q5FWF5 840 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 L3MBTL2Q969R5 705 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 PHF23Q9BUL5 403 aaPredicted RBP6.67□□□□□ -1.34
EDEM3-203ENST00000439962 MSH6P52701 1360 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 TMEM131LA2VDJ0 1609 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 LTBP4Q8N2S1 1624 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 SPHKAPQ2M3C7 1700 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 ZFYVE9O95405 1425 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 PLEKHG1Q9ULL1 1385 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 PMFBP1Q8TBY8 1022 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 PRAM1Q96QH2 718 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 LRRC7Q96NW7 1537 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 GOLGB1Q14789 3259 aaKnown RBP6.67□□□□□ -1.34
EDEM3-203ENST00000439962 FOXO3O43524 673 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 POLR3GLQ9BT43 218 aa6.67□□□□□ -1.34
EDEM3-203ENST00000439962 UTRNP46939 3433 aa6.66□□□□□ -1.34
EDEM3-203ENST00000439962 ADAMTS13Q76LX8 1427 aa6.66□□□□□ -1.34
EDEM3-203ENST00000439962 PTPRUQ92729 1446 aa6.66□□□□□ -1.34
EDEM3-203ENST00000439962 MIER1Q8N108 512 aa6.66□□□□□ -1.34
EDEM3-203ENST00000439962 STRCP1A6NGW2 1772 aa6.66□□□□□ -1.34
EDEM3-203ENST00000439962 ARHGAP23Q9P227 1491 aa6.66□□□□□ -1.34
EDEM3-203ENST00000439962 PLEKHH1Q9ULM0 1364 aa6.66□□□□□ -1.34
EDEM3-203ENST00000439962 CNGB1Q14028 1251 aaPredicted RBP6.66□□□□□ -1.34
EDEM3-203ENST00000439962 SLIT1O75093 1534 aa6.66□□□□□ -1.34
EDEM3-203ENST00000439962 ANKRD30BQ9BXX2 1392 aa6.65□□□□□ -1.34
EDEM3-203ENST00000439962 ROBO2Q9HCK4 1378 aa6.65□□□□□ -1.34
EDEM3-203ENST00000439962 ADAMTS2O95450 1211 aa6.65□□□□□ -1.34
EDEM3-203ENST00000439962 C19orf44Q9H6X5 657 aa6.65□□□□□ -1.34
EDEM3-203ENST00000439962 NUTM2GQ5VZR2 741 aa6.65□□□□□ -1.35
EDEM3-203ENST00000439962 MED14O60244 1454 aa6.64□□□□□ -1.35
EDEM3-203ENST00000439962 PAK3O75914 559 aaPredicted RBP6.64□□□□□ -1.35
EDEM3-203ENST00000439962 TONSLQ96HA7 1378 aa6.64□□□□□ -1.35
EDEM3-203ENST00000439962 TRPM2O94759 1503 aa6.64□□□□□ -1.35
EDEM3-203ENST00000439962 ZBTB7CA1YPR0 619 aa6.64□□□□□ -1.35
EDEM3-203ENST00000439962 SOX12O15370 315 aa6.64□□□□□ -1.35
EDEM3-203ENST00000439962 MEX3CQ5U5Q3 659 aaKnown RBP6.64□□□□□ -1.35
EDEM3-203ENST00000439962 CADPS2Q86UW7 1296 aa6.64□□□□□ -1.35
EDEM3-203ENST00000439962 KIF1BO60333 1816 aa6.64□□□□□ -1.35
EDEM3-203ENST00000439962 CCER2I3L3R5 266 aa6.63□□□□□ -1.35
EDEM3-203ENST00000439962 ILDR2Q71H61 639 aa6.63□□□□□ -1.35
EDEM3-203ENST00000439962 HAP1P54257 671 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms