RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 IFT172Q9UG01 1749 aa24.88■■□□□ 1.57
TARDBP-203ENST00000439080 NPHP4O75161 1426 aaPredicted RBP24.87■■□□□ 1.57
TARDBP-203ENST00000439080 LTKP29376 864 aa24.84■■□□□ 1.57
TARDBP-203ENST00000439080 EID1Q9Y6B2 187 aa24.84■■□□□ 1.57
TARDBP-203ENST00000439080 DHX57Q6P158 1386 aaKnown RBP24.84■■□□□ 1.57
TARDBP-203ENST00000439080 SPATA31E1Q6ZUB1 1445 aa24.84■■□□□ 1.57
TARDBP-203ENST00000439080 TXNDC2Q86VQ3 553 aa24.83■■□□□ 1.57
TARDBP-203ENST00000439080 DMRT2Q9Y5R5 561 aa24.83■■□□□ 1.57
TARDBP-203ENST00000439080 ZNF326Q5BKZ1 582 aaKnown RBP24.81■■□□□ 1.56
TARDBP-203ENST00000439080 NRXN3Q9Y4C0 1643 aa24.78■■□□□ 1.56
TARDBP-203ENST00000439080 PPP1R15AO75807 674 aaPredicted RBP24.77■■□□□ 1.56
TARDBP-203ENST00000439080 PLEKHG1Q9ULL1 1385 aa24.76■■□□□ 1.55
TARDBP-203ENST00000439080 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.76■■□□□ 1.55
TARDBP-203ENST00000439080 NUTM2DQ5VT03 806 aaPredicted RBP24.75■■□□□ 1.55
TARDBP-203ENST00000439080 SETBP1Q9Y6X0 1596 aa24.75■■□□□ 1.55
TARDBP-203ENST00000439080 DIP2AQ14689 1571 aa24.74■■□□□ 1.55
TARDBP-203ENST00000439080 HDGFP51858 240 aaKnown RBP24.74■■□□□ 1.55
TARDBP-203ENST00000439080 STRCP1A6NGW2 1772 aa24.71■■□□□ 1.55
TARDBP-203ENST00000439080 RPGRIP1LQ68CZ1 1315 aa24.71■■□□□ 1.55
TARDBP-203ENST00000439080 RGL3Q3MIN7 710 aa24.7■■□□□ 1.55
TARDBP-203ENST00000439080 SETD1AO15047 1707 aaKnown RBP24.7■■□□□ 1.54
TARDBP-203ENST00000439080 LTBP4Q8N2S1 1624 aa24.69■■□□□ 1.54
TARDBP-203ENST00000439080 SENP3Q9H4L4 574 aaPredicted RBP24.68■■□□□ 1.54
TARDBP-203ENST00000439080 ADAMTS13Q76LX8 1427 aa24.67■■□□□ 1.54
TARDBP-203ENST00000439080 MYOM2P54296 1465 aa24.67■■□□□ 1.54
TARDBP-203ENST00000439080 BCANQ96GW7 911 aa24.67■■□□□ 1.54
TARDBP-203ENST00000439080 NWD1Q149M9 1564 aa24.66■■□□□ 1.54
TARDBP-203ENST00000439080 ZNF335Q9H4Z2 1342 aaPredicted RBP24.65■■□□□ 1.54
TARDBP-203ENST00000439080 CHD2O14647 1828 aaKnown RBP24.65■■□□□ 1.54
TARDBP-203ENST00000439080 SLC26A8Q96RN1 970 aa24.64■■□□□ 1.53
TARDBP-203ENST00000439080 VGFO15240 615 aaPredicted RBP24.62■■□□□ 1.53
TARDBP-203ENST00000439080 NRXN1Q9ULB1 1477 aa24.62■■□□□ 1.53
TARDBP-203ENST00000439080 CPS1P31327 1500 aa24.61■■□□□ 1.53
TARDBP-203ENST00000439080 LAMC1P11047 1609 aa24.61■■□□□ 1.53
TARDBP-203ENST00000439080 ALKQ9UM73 1620 aa24.61■■□□□ 1.53
TARDBP-203ENST00000439080 PIK3C2GO75747 1445 aa24.61■■□□□ 1.53
TARDBP-203ENST00000439080 SIN3AQ96ST3 1273 aa24.59■■□□□ 1.53
TARDBP-203ENST00000439080 XRN1Q8IZH2 1706 aaKnown RBP24.58■■□□□ 1.53
TARDBP-203ENST00000439080 ADGRF5Q8IZF2 1346 aa24.58■■□□□ 1.53
TARDBP-203ENST00000439080 TBX22Q9Y458 520 aa24.55■■□□□ 1.52
TARDBP-203ENST00000439080 XIRP1Q702N8 1843 aaKnown RBP24.55■■□□□ 1.52
TARDBP-203ENST00000439080 NKTRP30414 1462 aaKnown RBP24.55■■□□□ 1.52
TARDBP-203ENST00000439080 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
TARDBP-203ENST00000439080 ASXL1Q8IXJ9 1541 aa24.54■■□□□ 1.52
TARDBP-203ENST00000439080 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
TARDBP-203ENST00000439080 DCAF11Q8TEB1 546 aa24.53■■□□□ 1.52
TARDBP-203ENST00000439080 METP08581 1390 aa24.51■■□□□ 1.51
TARDBP-203ENST00000439080 PTPRUQ92729 1446 aa24.51■■□□□ 1.51
TARDBP-203ENST00000439080 LRRC7Q96NW7 1537 aa24.5■■□□□ 1.51
TARDBP-203ENST00000439080 KNDC1Q76NI1 1749 aa24.5■■□□□ 1.51
TARDBP-203ENST00000439080 KIAA1210Q9ULL0 1709 aa24.49■■□□□ 1.51
TARDBP-203ENST00000439080 IQSEC2Q5JU85 1478 aa24.49■■□□□ 1.51
TARDBP-203ENST00000439080 KCNA6P17658 529 aa24.48■■□□□ 1.51
TARDBP-203ENST00000439080 KDM2AQ9Y2K7 1162 aa24.48■■□□□ 1.51
TARDBP-203ENST00000439080 CERKQ8TCT0 537 aa24.45■■□□□ 1.5
TARDBP-203ENST00000439080 STAC3Q96MF2 364 aa24.45■■□□□ 1.5
TARDBP-203ENST00000439080 PRAG1Q86YV5 1406 aa24.45■■□□□ 1.5
TARDBP-203ENST00000439080 CLSPNQ9HAW4 1339 aa24.45■■□□□ 1.5
TARDBP-203ENST00000439080 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
TARDBP-203ENST00000439080 L3MBTL2Q969R5 705 aa24.44■■□□□ 1.5
TARDBP-203ENST00000439080 ADGRB1O14514 1584 aa24.43■■□□□ 1.5
TARDBP-203ENST00000439080 CCER1Q8TC90 406 aaPredicted RBP24.43■■□□□ 1.5
TARDBP-203ENST00000439080 TRPM1Q7Z4N2 1603 aa24.42■■□□□ 1.5
TARDBP-203ENST00000439080 PTCH1Q13635 1447 aa24.41■■□□□ 1.5
TARDBP-203ENST00000439080 C14orf93Q9H972 538 aaKnown RBP24.41■■□□□ 1.5
TARDBP-203ENST00000439080 AMOTL2Q9Y2J4 779 aa24.41■■□□□ 1.5
TARDBP-203ENST00000439080 CFAP70Q5T0N1 1121 aa24.4■■□□□ 1.5
TARDBP-203ENST00000439080 NALCNQ8IZF0 1738 aa24.39■■□□□ 1.5
TARDBP-203ENST00000439080 TMEM94Q12767 1356 aa24.38■■□□□ 1.49
TARDBP-203ENST00000439080 YTHDC2Q9H6S0 1430 aaKnown RBP24.38■■□□□ 1.49
TARDBP-203ENST00000439080 TECPR2O15040 1411 aa24.37■■□□□ 1.49
TARDBP-203ENST00000439080 LRPPRCP42704 1394 aaKnown RBP24.36■■□□□ 1.49
TARDBP-203ENST00000439080 TMEM132EQ6IEE7 984 aa24.35■■□□□ 1.49
TARDBP-203ENST00000439080 PROSER2Q86WR7 435 aaPredicted RBP24.35■■□□□ 1.49
TARDBP-203ENST00000439080 ARHGEF28Q8N1W1 1705 aaKnown RBP24.34■■□□□ 1.49
TARDBP-203ENST00000439080 ROBO2Q9HCK4 1378 aa24.33■■□□□ 1.49
TARDBP-203ENST00000439080 RBM33Q96EV2 1170 aaKnown RBP24.33■■□□□ 1.49
TARDBP-203ENST00000439080 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.33■■□□□ 1.49
TARDBP-203ENST00000439080 DLC1Q96QB1 1528 aa24.31■■□□□ 1.48
TARDBP-203ENST00000439080 NCOA3Q9Y6Q9 1424 aa24.3■■□□□ 1.48
TARDBP-203ENST00000439080 ABCC11Q96J66 1382 aa24.3■■□□□ 1.48
TARDBP-203ENST00000439080 STK26Q9P289 416 aa24.29■■□□□ 1.48
TARDBP-203ENST00000439080 MSH6P52701 1360 aa24.27■■□□□ 1.48
TARDBP-203ENST00000439080 ADGRL3Q9HAR2 1447 aa24.27■■□□□ 1.48
TARDBP-203ENST00000439080 RALGAPBQ86X10 1494 aa24.26■■□□□ 1.47
TARDBP-203ENST00000439080 FAM135BQ49AJ0 1406 aa24.25■■□□□ 1.47
TARDBP-203ENST00000439080 C14orf37Q86TY3 774 aa24.25■■□□□ 1.47
TARDBP-203ENST00000439080 NBPF8Q3BBV2 869 aa24.24■■□□□ 1.47
TARDBP-203ENST00000439080 PLEKHH1Q9ULM0 1364 aa24.23■■□□□ 1.47
TARDBP-203ENST00000439080 NBPF1Q3BBV0 1214 aa24.23■■□□□ 1.47
TARDBP-203ENST00000439080 DCCP43146 1447 aa24.23■■□□□ 1.47
TARDBP-203ENST00000439080 CDC42BPGQ6DT37 1551 aa24.22■■□□□ 1.47
TARDBP-203ENST00000439080 ROCK2O75116 1388 aaKnown RBP24.21■■□□□ 1.47
TARDBP-203ENST00000439080 UBAP1LF5GYI3 381 aa24.21■■□□□ 1.47
TARDBP-203ENST00000439080 TIMELESSQ9UNS1 1208 aa24.2■■□□□ 1.46
TARDBP-203ENST00000439080 QRICH2Q9H0J4 1663 aa24.2■■□□□ 1.46
TARDBP-203ENST00000439080 ADGRB2O60241 1585 aa24.19■■□□□ 1.46
TARDBP-203ENST00000439080 TRAK1Q9UPV9 953 aa24.19■■□□□ 1.46
TARDBP-203ENST00000439080 WAPLQ7Z5K2 1190 aa24.18■■□□□ 1.46
TARDBP-203ENST00000439080 FBXO41Q8TF61 875 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms