RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 NEXMIFQ5QGS0 1516 aa23.77■■□□□ 1.4
SNRPB-202ENST00000438552 NPHP4O75161 1426 aaPredicted RBP23.76■■□□□ 1.39
SNRPB-202ENST00000438552 LTKP29376 864 aa23.76■■□□□ 1.39
SNRPB-202ENST00000438552 PPLO60437 1756 aa23.75■■□□□ 1.39
SNRPB-202ENST00000438552 IFT172Q9UG01 1749 aa23.74■■□□□ 1.39
SNRPB-202ENST00000438552 TXNDC2Q86VQ3 553 aa23.74■■□□□ 1.39
SNRPB-202ENST00000438552 DHX57Q6P158 1386 aaKnown RBP23.74■■□□□ 1.39
SNRPB-202ENST00000438552 EID1Q9Y6B2 187 aa23.73■■□□□ 1.39
SNRPB-202ENST00000438552 SPATA31E1Q6ZUB1 1445 aa23.73■■□□□ 1.39
SNRPB-202ENST00000438552 ZNF326Q5BKZ1 582 aaKnown RBP23.72■■□□□ 1.39
SNRPB-202ENST00000438552 DMRT2Q9Y5R5 561 aa23.72■■□□□ 1.39
SNRPB-202ENST00000438552 NUTM2DQ5VT03 806 aaPredicted RBP23.69■■□□□ 1.38
SNRPB-202ENST00000438552 PPP1R15AO75807 674 aaPredicted RBP23.68■■□□□ 1.38
SNRPB-202ENST00000438552 PLEKHG1Q9ULL1 1385 aa23.66■■□□□ 1.38
SNRPB-202ENST00000438552 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
SNRPB-202ENST00000438552 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
SNRPB-202ENST00000438552 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.65■■□□□ 1.38
SNRPB-202ENST00000438552 RGL3Q3MIN7 710 aa23.63■■□□□ 1.37
SNRPB-202ENST00000438552 SETBP1Q9Y6X0 1596 aa23.63■■□□□ 1.37
SNRPB-202ENST00000438552 HDGFP51858 240 aaKnown RBP23.62■■□□□ 1.37
SNRPB-202ENST00000438552 STRCP1A6NGW2 1772 aa23.62■■□□□ 1.37
SNRPB-202ENST00000438552 DIP2AQ14689 1571 aa23.61■■□□□ 1.37
SNRPB-202ENST00000438552 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
SNRPB-202ENST00000438552 ZNF335Q9H4Z2 1342 aaPredicted RBP23.59■■□□□ 1.37
SNRPB-202ENST00000438552 LTBP4Q8N2S1 1624 aa23.59■■□□□ 1.37
SNRPB-202ENST00000438552 BCANQ96GW7 911 aa23.59■■□□□ 1.37
SNRPB-202ENST00000438552 SETD1AO15047 1707 aaKnown RBP23.59■■□□□ 1.37
SNRPB-202ENST00000438552 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
SNRPB-202ENST00000438552 SLC26A8Q96RN1 970 aa23.58■■□□□ 1.37
SNRPB-202ENST00000438552 MYOM2P54296 1465 aa23.56■■□□□ 1.36
SNRPB-202ENST00000438552 NWD1Q149M9 1564 aa23.54■■□□□ 1.36
SNRPB-202ENST00000438552 CHD2O14647 1828 aaKnown RBP23.54■■□□□ 1.36
SNRPB-202ENST00000438552 VGFO15240 615 aaPredicted RBP23.52■■□□□ 1.36
SNRPB-202ENST00000438552 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
SNRPB-202ENST00000438552 ADGRF5Q8IZF2 1346 aa23.52■■□□□ 1.36
SNRPB-202ENST00000438552 ALKQ9UM73 1620 aa23.51■■□□□ 1.35
SNRPB-202ENST00000438552 NRXN1Q9ULB1 1477 aa23.5■■□□□ 1.35
SNRPB-202ENST00000438552 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
SNRPB-202ENST00000438552 CPS1P31327 1500 aa23.49■■□□□ 1.35
SNRPB-202ENST00000438552 LAMC1P11047 1609 aa23.48■■□□□ 1.35
SNRPB-202ENST00000438552 XRN1Q8IZH2 1706 aaKnown RBP23.47■■□□□ 1.35
SNRPB-202ENST00000438552 NEUROD1Q13562 356 aa23.47■■□□□ 1.35
SNRPB-202ENST00000438552 TBX22Q9Y458 520 aa23.47■■□□□ 1.35
SNRPB-202ENST00000438552 DCAF11Q8TEB1 546 aa23.45■■□□□ 1.34
SNRPB-202ENST00000438552 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
SNRPB-202ENST00000438552 ASXL1Q8IXJ9 1541 aa23.44■■□□□ 1.34
SNRPB-202ENST00000438552 PTPRUQ92729 1446 aa23.44■■□□□ 1.34
SNRPB-202ENST00000438552 METP08581 1390 aa23.44■■□□□ 1.34
SNRPB-202ENST00000438552 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
SNRPB-202ENST00000438552 SOCS7O14512 581 aa23.43■■□□□ 1.34
SNRPB-202ENST00000438552 KDM2AQ9Y2K7 1162 aa23.43■■□□□ 1.34
SNRPB-202ENST00000438552 PIK3R4Q99570 1358 aa23.42■■□□□ 1.34
SNRPB-202ENST00000438552 LRRC7Q96NW7 1537 aa23.42■■□□□ 1.34
SNRPB-202ENST00000438552 KCNA6P17658 529 aa23.4■■□□□ 1.34
SNRPB-202ENST00000438552 CERKQ8TCT0 537 aa23.39■■□□□ 1.33
SNRPB-202ENST00000438552 ILDR2Q71H61 639 aa23.37■■□□□ 1.33
SNRPB-202ENST00000438552 L3MBTL2Q969R5 705 aa23.37■■□□□ 1.33
SNRPB-202ENST00000438552 IQSEC2Q5JU85 1478 aa23.36■■□□□ 1.33
SNRPB-202ENST00000438552 KNDC1Q76NI1 1749 aa23.36■■□□□ 1.33
SNRPB-202ENST00000438552 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
SNRPB-202ENST00000438552 PRAG1Q86YV5 1406 aa23.35■■□□□ 1.33
SNRPB-202ENST00000438552 CCER1Q8TC90 406 aaPredicted RBP23.35■■□□□ 1.33
SNRPB-202ENST00000438552 TONSLQ96HA7 1378 aa23.35■■□□□ 1.33
SNRPB-202ENST00000438552 AMOTL2Q9Y2J4 779 aa23.34■■□□□ 1.33
SNRPB-202ENST00000438552 ADGRB1O14514 1584 aa23.33■■□□□ 1.33
SNRPB-202ENST00000438552 CFAP70Q5T0N1 1121 aa23.33■■□□□ 1.33
SNRPB-202ENST00000438552 STAC3Q96MF2 364 aa23.33■■□□□ 1.33
SNRPB-202ENST00000438552 CLSPNQ9HAW4 1339 aa23.33■■□□□ 1.32
SNRPB-202ENST00000438552 C14orf93Q9H972 538 aaKnown RBP23.32■■□□□ 1.32
SNRPB-202ENST00000438552 TMEM94Q12767 1356 aa23.31■■□□□ 1.32
SNRPB-202ENST00000438552 TRPM1Q7Z4N2 1603 aa23.31■■□□□ 1.32
SNRPB-202ENST00000438552 TMEM132EQ6IEE7 984 aa23.3■■□□□ 1.32
SNRPB-202ENST00000438552 PROSER2Q86WR7 435 aaPredicted RBP23.3■■□□□ 1.32
SNRPB-202ENST00000438552 RBM33Q96EV2 1170 aaKnown RBP23.3■■□□□ 1.32
SNRPB-202ENST00000438552 PTCH1Q13635 1447 aa23.3■■□□□ 1.32
SNRPB-202ENST00000438552 NALCNQ8IZF0 1738 aa23.29■■□□□ 1.32
SNRPB-202ENST00000438552 YTHDC2Q9H6S0 1430 aaKnown RBP23.28■■□□□ 1.32
SNRPB-202ENST00000438552 LRPPRCP42704 1394 aaKnown RBP23.27■■□□□ 1.32
SNRPB-202ENST00000438552 DISP3Q9P2K9 1392 aa23.27■■□□□ 1.32
SNRPB-202ENST00000438552 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.31
SNRPB-202ENST00000438552 TECPR2O15040 1411 aa23.26■■□□□ 1.31
SNRPB-202ENST00000438552 STK26Q9P289 416 aa23.25■■□□□ 1.31
SNRPB-202ENST00000438552 ARHGEF28Q8N1W1 1705 aaKnown RBP23.24■■□□□ 1.31
SNRPB-202ENST00000438552 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.24■■□□□ 1.31
SNRPB-202ENST00000438552 ABCC11Q96J66 1382 aa23.22■■□□□ 1.31
SNRPB-202ENST00000438552 DLC1Q96QB1 1528 aa23.21■■□□□ 1.31
SNRPB-202ENST00000438552 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.3
SNRPB-202ENST00000438552 NBPF8Q3BBV2 869 aa23.19■■□□□ 1.3
SNRPB-202ENST00000438552 ADGRL3Q9HAR2 1447 aa23.18■■□□□ 1.3
SNRPB-202ENST00000438552 MSH6P52701 1360 aa23.18■■□□□ 1.3
SNRPB-202ENST00000438552 C14orf37Q86TY3 774 aa23.18■■□□□ 1.3
SNRPB-202ENST00000438552 PLEKHH1Q9ULM0 1364 aa23.17■■□□□ 1.3
SNRPB-202ENST00000438552 NBPF1Q3BBV0 1214 aa23.17■■□□□ 1.3
SNRPB-202ENST00000438552 RALGAPBQ86X10 1494 aa23.17■■□□□ 1.3
SNRPB-202ENST00000438552 UBAP1LF5GYI3 381 aa23.16■■□□□ 1.3
SNRPB-202ENST00000438552 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
SNRPB-202ENST00000438552 WAPLQ7Z5K2 1190 aa23.14■■□□□ 1.29
SNRPB-202ENST00000438552 TRAK1Q9UPV9 953 aa23.14■■□□□ 1.29
SNRPB-202ENST00000438552 ROCK2O75116 1388 aaKnown RBP23.14■■□□□ 1.29
SNRPB-202ENST00000438552 CDC42BPGQ6DT37 1551 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms