RNA–Protein interactions for RNA: ENST00000438075.6

LST1-217, leukocyte specific transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LST1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-217ENST00000438075 C9orf84Q5VXU9 1444 aa19.1■□□□□ 0.65
LST1-217ENST00000438075 MLECQ14165 292 aa19.1■□□□□ 0.65
LST1-217ENST00000438075 AFAP1Q8N556 730 aa19.09■□□□□ 0.65
LST1-217ENST00000438075 FAM163AQ96GL9 167 aaPredicted RBP19.09■□□□□ 0.65
LST1-217ENST00000438075 MYT1LQ9UL68 1186 aa19.09■□□□□ 0.65
LST1-217ENST00000438075 ABCA6Q8N139 1617 aa19.08■□□□□ 0.65
LST1-217ENST00000438075 DIP2CQ9Y2E4 1556 aa19.08■□□□□ 0.65
LST1-217ENST00000438075 GTPBP6O43824 516 aaPredicted RBP19.08■□□□□ 0.64
LST1-217ENST00000438075 ARHGEF12Q9NZN5 1544 aa19.08■□□□□ 0.64
LST1-217ENST00000438075 SAMD9LQ8IVG5 1584 aa19.06■□□□□ 0.64
LST1-217ENST00000438075 TRAPPC8Q9Y2L5 1435 aa19.06■□□□□ 0.64
LST1-217ENST00000438075 RYDENQ9NUL5 291 aaKnown RBP19.05■□□□□ 0.64
LST1-217ENST00000438075 SNPHO15079 494 aa19.04■□□□□ 0.64
LST1-217ENST00000438075 ZNF777Q9ULD5 760 aaPredicted RBP19.04■□□□□ 0.64
LST1-217ENST00000438075 SYCP2Q9BX26 1530 aa19.04■□□□□ 0.64
LST1-217ENST00000438075 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
LST1-217ENST00000438075 KIF3CO14782 793 aa19.03■□□□□ 0.64
LST1-217ENST00000438075 ST18O60284 1047 aa19.03■□□□□ 0.64
LST1-217ENST00000438075 GPATCH8Q9UKJ3 1502 aaKnown RBP19.03■□□□□ 0.64
LST1-217ENST00000438075 HOXB3P14651 431 aaPredicted RBP19.02■□□□□ 0.64
LST1-217ENST00000438075 MLH3Q9UHC1 1453 aa19.02■□□□□ 0.63
LST1-217ENST00000438075 KIDINS220Q9ULH0 1771 aa19.01■□□□□ 0.63
LST1-217ENST00000438075 EHBP1L1Q8N3D4 1523 aa19.01■□□□□ 0.63
LST1-217ENST00000438075 LMTK3Q96Q04 1460 aa19.01■□□□□ 0.63
LST1-217ENST00000438075 REREQ9P2R6 1566 aa19.01■□□□□ 0.63
LST1-217ENST00000438075 CCNB3Q8WWL7 1395 aa19■□□□□ 0.63
LST1-217ENST00000438075 TIAM1Q13009 1591 aa18.99■□□□□ 0.63
LST1-217ENST00000438075 BBXQ8WY36 941 aaPredicted RBP18.96■□□□□ 0.63
LST1-217ENST00000438075 LOC105371045A0A1W2PR82 267 aa18.95■□□□□ 0.62
LST1-217ENST00000438075 POTEMA6NI47 508 aa18.95■□□□□ 0.62
LST1-217ENST00000438075 CFDP1Q9UEE9 299 aaPredicted RBP18.95■□□□□ 0.62
LST1-217ENST00000438075 C2orf72A6NCS6 295 aa18.94■□□□□ 0.62
LST1-217ENST00000438075 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
LST1-217ENST00000438075 POTEGQ6S5H5 508 aa18.94■□□□□ 0.62
LST1-217ENST00000438075 PLEKHH2Q8IVE3 1493 aa18.93■□□□□ 0.62
LST1-217ENST00000438075 AGLP35573 1532 aa18.93■□□□□ 0.62
LST1-217ENST00000438075 ATP7AQ04656 1500 aa18.93■□□□□ 0.62
LST1-217ENST00000438075 INO80Q9ULG1 1556 aaPredicted RBP18.93■□□□□ 0.62
LST1-217ENST00000438075 PREX1Q8TCU6 1659 aa18.92■□□□□ 0.62
LST1-217ENST00000438075 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
LST1-217ENST00000438075 SPAG9O60271 1321 aaKnown RBP18.91■□□□□ 0.62
LST1-217ENST00000438075 CEBPAP49715 358 aaPredicted RBP18.9■□□□□ 0.62
LST1-217ENST00000438075 HSPA2P54652 639 aa18.9■□□□□ 0.62
LST1-217ENST00000438075 KIAA1107Q9UPP5 1409 aa18.9■□□□□ 0.62
LST1-217ENST00000438075 C3P01024 1663 aa18.89■□□□□ 0.61
LST1-217ENST00000438075 VPS8Q8N3P4 1428 aa18.89■□□□□ 0.61
LST1-217ENST00000438075 NCOA2Q15596 1464 aa18.87■□□□□ 0.61
LST1-217ENST00000438075 ZNF644Q9H582 1327 aaPredicted RBP18.87■□□□□ 0.61
LST1-217ENST00000438075 DOK7Q18PE1 504 aa18.85■□□□□ 0.61
LST1-217ENST00000438075 ESF1Q9H501 851 aaKnown RBP18.85■□□□□ 0.61
LST1-217ENST00000438075 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
LST1-217ENST00000438075 PLXNC1O60486 1568 aa18.84■□□□□ 0.61
LST1-217ENST00000438075 TMC2Q8TDI7 906 aa18.83■□□□□ 0.6
LST1-217ENST00000438075 A2MP01023 1474 aa18.83■□□□□ 0.6
LST1-217ENST00000438075 CAMSAP2Q08AD1 1489 aa18.83■□□□□ 0.6
LST1-217ENST00000438075 MBD5Q9P267 1494 aa18.82■□□□□ 0.6
LST1-217ENST00000438075 LRRC9Q6ZRR7 1453 aa18.81■□□□□ 0.6
LST1-217ENST00000438075 MROH2AA6NES4 1674 aa18.81■□□□□ 0.6
LST1-217ENST00000438075 CLTCQ00610 1675 aaKnown RBP18.81■□□□□ 0.6
LST1-217ENST00000438075 UHRF1BP1Q6BDS2 1440 aa18.8■□□□□ 0.6
LST1-217ENST00000438075 GPHNQ9NQX3 736 aaPredicted RBP18.79■□□□□ 0.6
LST1-217ENST00000438075 CNTLNQ9NXG0 1405 aa18.79■□□□□ 0.6
LST1-217ENST00000438075 CRISPLD2Q9H0B8 497 aa18.78■□□□□ 0.6
LST1-217ENST00000438075 CCDC141Q6ZP82 1450 aa18.77■□□□□ 0.6
LST1-217ENST00000438075 SETD1BQ9UPS6 1966 aaKnown RBP18.76■□□□□ 0.59
LST1-217ENST00000438075 MARVELD3Q96A59 401 aa18.76■□□□□ 0.59
LST1-217ENST00000438075 HOXB1P14653 301 aaPredicted RBP18.75■□□□□ 0.59
LST1-217ENST00000438075 FOXK1P85037 733 aa18.75■□□□□ 0.59
LST1-217ENST00000438075 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
LST1-217ENST00000438075 RTEL1-TNFRSF6BF6WH68 1400 aa18.74■□□□□ 0.59
LST1-217ENST00000438075 STRCQ7RTU9 1775 aa18.74■□□□□ 0.59
LST1-217ENST00000438075 ZNF710Q8N1W2 664 aa18.74■□□□□ 0.59
LST1-217ENST00000438075 ZSWIM6Q9HCJ5 1215 aa18.74■□□□□ 0.59
LST1-217ENST00000438075 MAP3K1Q13233 1512 aa18.74■□□□□ 0.59
LST1-217ENST00000438075 ARHGEF5Q12774 1597 aa18.73■□□□□ 0.59
LST1-217ENST00000438075 GGT6Q6P531 493 aa18.73■□□□□ 0.59
LST1-217ENST00000438075 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
LST1-217ENST00000438075 GPR153Q6NV75 609 aa18.72■□□□□ 0.59
LST1-217ENST00000438075 RIMBP2O15034 1052 aa18.71■□□□□ 0.59
LST1-217ENST00000438075 ZMYM3Q14202 1370 aa18.7■□□□□ 0.58
LST1-217ENST00000438075 DSG2Q14126 1118 aa18.7■□□□□ 0.58
LST1-217ENST00000438075 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.7■□□□□ 0.58
LST1-217ENST00000438075 SLC34A2O95436 690 aa18.69■□□□□ 0.58
LST1-217ENST00000438075 CADPS2Q86UW7 1296 aa18.69■□□□□ 0.58
LST1-217ENST00000438075 DHX29Q7Z478 1369 aaKnown RBP18.68■□□□□ 0.58
LST1-217ENST00000438075 NPATQ14207 1427 aa18.68■□□□□ 0.58
LST1-217ENST00000438075 MYO3AQ8NEV4 1616 aa18.68■□□□□ 0.58
LST1-217ENST00000438075 SPRYD3Q8NCJ5 442 aa18.68■□□□□ 0.58
LST1-217ENST00000438075 MYOM3Q5VTT5 1437 aa18.67■□□□□ 0.58
LST1-217ENST00000438075 EMP3P54852 163 aa18.67■□□□□ 0.58
LST1-217ENST00000438075 RSPH4AQ5TD94 716 aa18.66■□□□□ 0.58
LST1-217ENST00000438075 FBXO41Q8TF61 875 aa18.66■□□□□ 0.58
LST1-217ENST00000438075 PLPP6Q8IY26 295 aa18.65■□□□□ 0.58
LST1-217ENST00000438075 ZNF142P52746 1687 aaPredicted RBP18.65■□□□□ 0.58
LST1-217ENST00000438075 MAST1Q9Y2H9 1570 aa18.64■□□□□ 0.58
LST1-217ENST00000438075 KIF3BO15066 747 aa18.64■□□□□ 0.57
LST1-217ENST00000438075 TSPY4P0CV99 314 aa18.63■□□□□ 0.57
LST1-217ENST00000438075 TSPY10P0CW01 314 aa18.63■□□□□ 0.57
LST1-217ENST00000438075 PTPRKQ15262 1439 aa18.63■□□□□ 0.57
LST1-217ENST00000438075 MIA2Q96PC5 1412 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms