RNA–Protein interactions for RNA: ENST00000437615.1

LINC00242-201, long intergenic non-protein coding RNA 242, humanhuman

TSL 2 BASIC

Gene LINC00242, Length 2,418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242-201ENST00000437615 ARHGAP31Q2M1Z3 1444 aa16.9■□□□□ 0.3
LINC00242-201ENST00000437615 IDI1Q13907 227 aa16.89■□□□□ 0.29
LINC00242-201ENST00000437615 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
LINC00242-201ENST00000437615 CDCA8Q53HL2 280 aa16.89■□□□□ 0.29
LINC00242-201ENST00000437615 ZMYM4Q5VZL5 1548 aa16.89■□□□□ 0.29
LINC00242-201ENST00000437615 CAMSAP1Q5T5Y3 1602 aa16.89■□□□□ 0.29
LINC00242-201ENST00000437615 ADGRB3O60242 1522 aa16.89■□□□□ 0.29
LINC00242-201ENST00000437615 TMC1Q8TDI8 760 aa16.89■□□□□ 0.29
LINC00242-201ENST00000437615 KTN1Q86UP2 1357 aaKnown RBP16.88■□□□□ 0.29
LINC00242-201ENST00000437615 SLC52A1Q9NWF4 448 aa16.88■□□□□ 0.29
LINC00242-201ENST00000437615 SUPT16HQ9Y5B9 1047 aaKnown RBP16.88■□□□□ 0.29
LINC00242-201ENST00000437615 MYBBP1AQ9BQG0 1328 aaKnown RBP16.87■□□□□ 0.29
LINC00242-201ENST00000437615 C14orf93Q9H972 538 aaKnown RBP16.87■□□□□ 0.29
LINC00242-201ENST00000437615 NRXN1Q9ULB1 1477 aa16.87■□□□□ 0.29
LINC00242-201ENST00000437615 MROH2AA6NES4 1674 aa16.87■□□□□ 0.29
LINC00242-201ENST00000437615 NUTM2DQ5VT03 806 aaPredicted RBP16.86■□□□□ 0.29
LINC00242-201ENST00000437615 IQGAP1P46940 1657 aa16.86■□□□□ 0.29
LINC00242-201ENST00000437615 VGFO15240 615 aaPredicted RBP16.85■□□□□ 0.29
LINC00242-201ENST00000437615 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
LINC00242-201ENST00000437615 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
LINC00242-201ENST00000437615 FBXO31Q5XUX0 539 aaPredicted RBP16.85■□□□□ 0.29
LINC00242-201ENST00000437615 PNISRQ8TF01 805 aaKnown RBP16.85■□□□□ 0.29
LINC00242-201ENST00000437615 CC2D1BQ5T0F9 858 aaKnown RBP16.84■□□□□ 0.29
LINC00242-201ENST00000437615 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
LINC00242-201ENST00000437615 SIGLEC1Q9BZZ2 1709 aa16.83■□□□□ 0.28
LINC00242-201ENST00000437615 MLECQ14165 292 aa16.83■□□□□ 0.28
LINC00242-201ENST00000437615 SYNMO15061 1565 aa16.83■□□□□ 0.28
LINC00242-201ENST00000437615 TMEM132EQ6IEE7 984 aa16.82■□□□□ 0.28
LINC00242-201ENST00000437615 PIK3C2GO75747 1445 aa16.82■□□□□ 0.28
LINC00242-201ENST00000437615 TRAK1Q9UPV9 953 aa16.82■□□□□ 0.28
LINC00242-201ENST00000437615 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
LINC00242-201ENST00000437615 ZC3H13Q5T200 1668 aaKnown RBP16.82■□□□□ 0.28
LINC00242-201ENST00000437615 BRD4O60885 1362 aaPredicted RBP16.82■□□□□ 0.28
LINC00242-201ENST00000437615 PARD3Q8TEW0 1356 aa16.82■□□□□ 0.28
LINC00242-201ENST00000437615 ZBED9Q6R2W3 1325 aa16.81■□□□□ 0.28
LINC00242-201ENST00000437615 FKBP8Q14318 412 aa16.8■□□□□ 0.28
LINC00242-201ENST00000437615 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
LINC00242-201ENST00000437615 NLRP13Q86W25 1043 aa16.8■□□□□ 0.28
LINC00242-201ENST00000437615 AGLP35573 1532 aa16.79■□□□□ 0.28
LINC00242-201ENST00000437615 PIK3C2BO00750 1634 aa16.79■□□□□ 0.28
LINC00242-201ENST00000437615 NEFLP07196 543 aa16.78■□□□□ 0.28
LINC00242-201ENST00000437615 CENPJQ9HC77 1338 aaPredicted RBP16.78■□□□□ 0.28
LINC00242-201ENST00000437615 REREQ9P2R6 1566 aa16.77■□□□□ 0.28
LINC00242-201ENST00000437615 PPLO60437 1756 aa16.77■□□□□ 0.27
LINC00242-201ENST00000437615 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.27
LINC00242-201ENST00000437615 KIF13AQ9H1H9 1805 aa16.76■□□□□ 0.27
LINC00242-201ENST00000437615 SETBP1Q9Y6X0 1596 aa16.76■□□□□ 0.27
LINC00242-201ENST00000437615 SENP3Q9H4L4 574 aaPredicted RBP16.76■□□□□ 0.27
LINC00242-201ENST00000437615 ESF1Q9H501 851 aaKnown RBP16.75■□□□□ 0.27
LINC00242-201ENST00000437615 NEXMIFQ5QGS0 1516 aa16.74■□□□□ 0.27
LINC00242-201ENST00000437615 ERVK-7P63135 1459 aa16.74■□□□□ 0.27
LINC00242-201ENST00000437615 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
LINC00242-201ENST00000437615 PREX1Q8TCU6 1659 aa16.73■□□□□ 0.27
LINC00242-201ENST00000437615 SBNO2Q9Y2G9 1366 aa16.73■□□□□ 0.27
LINC00242-201ENST00000437615 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
LINC00242-201ENST00000437615 ZFYVE9O95405 1425 aa16.72■□□□□ 0.27
LINC00242-201ENST00000437615 LRPPRCP42704 1394 aaKnown RBP16.72■□□□□ 0.27
LINC00242-201ENST00000437615 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
LINC00242-201ENST00000437615 BCANQ96GW7 911 aa16.71■□□□□ 0.27
LINC00242-201ENST00000437615 MYT1Q01538 1121 aa16.7■□□□□ 0.26
LINC00242-201ENST00000437615 STK26Q9P289 416 aa16.69■□□□□ 0.26
LINC00242-201ENST00000437615 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
LINC00242-201ENST00000437615 ARHGEF40Q8TER5 1519 aa16.69■□□□□ 0.26
LINC00242-201ENST00000437615 ZMYM3Q14202 1370 aa16.68■□□□□ 0.26
LINC00242-201ENST00000437615 CARD14Q9BXL6 1004 aa16.68■□□□□ 0.26
LINC00242-201ENST00000437615 CLTCQ00610 1675 aaKnown RBP16.67■□□□□ 0.26
LINC00242-201ENST00000437615 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
LINC00242-201ENST00000437615 KDM5AP29375 1690 aaKnown RBP16.67■□□□□ 0.26
LINC00242-201ENST00000437615 MYO3AQ8NEV4 1616 aa16.67■□□□□ 0.26
LINC00242-201ENST00000437615 SAFB2Q14151 953 aaKnown RBP eCLIP16.66■□□□□ 0.26
LINC00242-201ENST00000437615 SLC12A5Q9H2X9 1139 aa16.66■□□□□ 0.26
LINC00242-201ENST00000437615 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
LINC00242-201ENST00000437615 NPC1L1Q9UHC9 1359 aa16.65■□□□□ 0.26
LINC00242-201ENST00000437615 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
LINC00242-201ENST00000437615 SPATA31D1Q6ZQQ2 1576 aa16.63■□□□□ 0.25
LINC00242-201ENST00000437615 MYOM1P52179 1685 aa16.63■□□□□ 0.25
LINC00242-201ENST00000437615 MYO5BQ9ULV0 1848 aa16.62■□□□□ 0.25
LINC00242-201ENST00000437615 A2ML1A8K2U0 1454 aa16.62■□□□□ 0.25
LINC00242-201ENST00000437615 IRX6P78412 446 aaPredicted RBP16.62■□□□□ 0.25
LINC00242-201ENST00000437615 PUS7Q96PZ0 661 aaKnown RBP16.62■□□□□ 0.25
LINC00242-201ENST00000437615 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
LINC00242-201ENST00000437615 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
LINC00242-201ENST00000437615 NUDCQ9Y266 331 aa16.61■□□□□ 0.25
LINC00242-201ENST00000437615 POGKQ9P215 609 aa16.61■□□□□ 0.25
LINC00242-201ENST00000437615 SMG6Q86US8 1419 aaKnown RBP16.61■□□□□ 0.25
LINC00242-201ENST00000437615 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
LINC00242-201ENST00000437615 PRAM1Q96QH2 718 aa16.6■□□□□ 0.25
LINC00242-201ENST00000437615 QRICH2Q9H0J4 1663 aa16.6■□□□□ 0.25
LINC00242-201ENST00000437615 ADAMTS8Q9UP79 889 aa16.59■□□□□ 0.25
LINC00242-201ENST00000437615 RIMS2Q9UQ26 1411 aa16.59■□□□□ 0.25
LINC00242-201ENST00000437615 YTHDC2Q9H6S0 1430 aaKnown RBP16.59■□□□□ 0.25
LINC00242-201ENST00000437615 WDR43Q15061 677 aaKnown RBP eCLIP16.58■□□□□ 0.24
LINC00242-201ENST00000437615 SRPK2P78362 688 aaKnown RBP16.57■□□□□ 0.24
LINC00242-201ENST00000437615 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC00242-201ENST00000437615 MINK1Q8N4C8 1332 aaPredicted RBP16.57■□□□□ 0.24
LINC00242-201ENST00000437615 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
LINC00242-201ENST00000437615 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
LINC00242-201ENST00000437615 INSRP06213 1382 aa16.56■□□□□ 0.24
LINC00242-201ENST00000437615 NSD3Q9BZ95 1437 aa16.56■□□□□ 0.24
LINC00242-201ENST00000437615 TNRQ92752 1358 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms