RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 MROH2AA6NES4 1674 aa21.26■□□□□ 0.99
SGCE-205ENST00000437425 PREX1Q8TCU6 1659 aa21.26■□□□□ 0.99
SGCE-205ENST00000437425 SCAF11Q99590 1463 aaKnown RBP21.26■□□□□ 0.99
SGCE-205ENST00000437425 IQGAP1P46940 1657 aa21.24■□□□□ 0.99
SGCE-205ENST00000437425 PPLO60437 1756 aa21.23■□□□□ 0.99
SGCE-205ENST00000437425 CHGAP10645 457 aaKnown RBP21.22■□□□□ 0.99
SGCE-205ENST00000437425 ERVK-7P63135 1459 aa21.22■□□□□ 0.99
SGCE-205ENST00000437425 SETBP1Q9Y6X0 1596 aa21.22■□□□□ 0.99
SGCE-205ENST00000437425 VGFO15240 615 aaPredicted RBP21.21■□□□□ 0.99
SGCE-205ENST00000437425 CFAP65Q6ZU64 1925 aaKnown RBP21.21■□□□□ 0.99
SGCE-205ENST00000437425 ZFYVE9O95405 1425 aa21.21■□□□□ 0.99
SGCE-205ENST00000437425 TMF1P82094 1093 aa21.2■□□□□ 0.98
SGCE-205ENST00000437425 ESF1Q9H501 851 aaKnown RBP21.2■□□□□ 0.98
SGCE-205ENST00000437425 CDCA8Q53HL2 280 aa21.19■□□□□ 0.98
SGCE-205ENST00000437425 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
SGCE-205ENST00000437425 CLTCQ00610 1675 aaKnown RBP21.19■□□□□ 0.98
SGCE-205ENST00000437425 KDM4FA0A1W2PPD8 638 aa21.19■□□□□ 0.98
SGCE-205ENST00000437425 PIK3C2GO75747 1445 aa21.19■□□□□ 0.98
SGCE-205ENST00000437425 ADGRF5Q8IZF2 1346 aa21.18■□□□□ 0.98
SGCE-205ENST00000437425 IDI1Q13907 227 aa21.18■□□□□ 0.98
SGCE-205ENST00000437425 SPATA31D1Q6ZQQ2 1576 aa21.18■□□□□ 0.98
SGCE-205ENST00000437425 TESK2Q96S53 571 aa21.18■□□□□ 0.98
SGCE-205ENST00000437425 NEXMIFQ5QGS0 1516 aa21.15■□□□□ 0.98
SGCE-205ENST00000437425 KTN1Q86UP2 1357 aaKnown RBP21.15■□□□□ 0.98
SGCE-205ENST00000437425 PRKRIP1Q9H875 184 aaPredicted RBP21.14■□□□□ 0.98
SGCE-205ENST00000437425 C14orf93Q9H972 538 aaKnown RBP21.14■□□□□ 0.98
SGCE-205ENST00000437425 TMEM131LA2VDJ0 1609 aa21.14■□□□□ 0.98
SGCE-205ENST00000437425 CFAP70Q5T0N1 1121 aa21.13■□□□□ 0.97
SGCE-205ENST00000437425 POLR3GLQ9BT43 218 aa21.13■□□□□ 0.97
SGCE-205ENST00000437425 SBNO2Q9Y2G9 1366 aa21.1■□□□□ 0.97
SGCE-205ENST00000437425 ZMYM3Q14202 1370 aa21.09■□□□□ 0.97
SGCE-205ENST00000437425 MYO3AQ8NEV4 1616 aa21.09■□□□□ 0.97
SGCE-205ENST00000437425 MLECQ14165 292 aa21.09■□□□□ 0.97
SGCE-205ENST00000437425 FBXO31Q5XUX0 539 aaPredicted RBP21.08■□□□□ 0.96
SGCE-205ENST00000437425 DISP3Q9P2K9 1392 aa21.07■□□□□ 0.96
SGCE-205ENST00000437425 STAG3Q9UJ98 1225 aa21.07■□□□□ 0.96
SGCE-205ENST00000437425 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
SGCE-205ENST00000437425 KDM5AP29375 1690 aaKnown RBP21.03■□□□□ 0.96
SGCE-205ENST00000437425 RALBP1Q15311 655 aa21.03■□□□□ 0.96
SGCE-205ENST00000437425 HDGFP51858 240 aaKnown RBP21.02■□□□□ 0.96
SGCE-205ENST00000437425 A2ML1A8K2U0 1454 aa21.02■□□□□ 0.95
SGCE-205ENST00000437425 CENPJQ9HC77 1338 aaPredicted RBP21.01■□□□□ 0.95
SGCE-205ENST00000437425 MYO5BQ9ULV0 1848 aa21■□□□□ 0.95
SGCE-205ENST00000437425 ABCF1Q8NE71 845 aaKnown RBP eCLIP21■□□□□ 0.95
SGCE-205ENST00000437425 TNRQ92752 1358 aa20.99■□□□□ 0.95
SGCE-205ENST00000437425 ILDR1Q86SU0 546 aaPredicted RBP20.99■□□□□ 0.95
SGCE-205ENST00000437425 PUS7Q96PZ0 661 aaKnown RBP20.98■□□□□ 0.95
SGCE-205ENST00000437425 NLRP1Q9C000 1473 aa20.96■□□□□ 0.95
SGCE-205ENST00000437425 PER1O15534 1290 aaPredicted RBP20.95■□□□□ 0.94
SGCE-205ENST00000437425 MRS2Q9HD23 443 aa20.95■□□□□ 0.94
SGCE-205ENST00000437425 RIMS2Q9UQ26 1411 aa20.95■□□□□ 0.94
SGCE-205ENST00000437425 PANK3Q9H999 370 aa20.94■□□□□ 0.94
SGCE-205ENST00000437425 TRAK1Q9UPV9 953 aa20.93■□□□□ 0.94
SGCE-205ENST00000437425 MYBBP1AQ9BQG0 1328 aaKnown RBP20.93■□□□□ 0.94
SGCE-205ENST00000437425 QRICH2Q9H0J4 1663 aa20.91■□□□□ 0.94
SGCE-205ENST00000437425 BRD4O60885 1362 aaPredicted RBP20.91■□□□□ 0.94
SGCE-205ENST00000437425 PARD3Q8TEW0 1356 aa20.91■□□□□ 0.94
SGCE-205ENST00000437425 ALKQ9UM73 1620 aa20.91■□□□□ 0.94
SGCE-205ENST00000437425 TMEM132EQ6IEE7 984 aa20.9■□□□□ 0.94
SGCE-205ENST00000437425 NUTM2DQ5VT03 806 aaPredicted RBP20.89■□□□□ 0.94
SGCE-205ENST00000437425 ARHGEF28Q8N1W1 1705 aaKnown RBP20.89■□□□□ 0.94
SGCE-205ENST00000437425 NPC1L1Q9UHC9 1359 aa20.89■□□□□ 0.94
SGCE-205ENST00000437425 KNSTRNQ9Y448 316 aa20.88■□□□□ 0.93
SGCE-205ENST00000437425 FER1L4A9Z1Z3 1794 aa20.88■□□□□ 0.93
SGCE-205ENST00000437425 YTHDC2Q9H6S0 1430 aaKnown RBP20.87■□□□□ 0.93
SGCE-205ENST00000437425 EVC2Q86UK5 1308 aa20.87■□□□□ 0.93
SGCE-205ENST00000437425 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
SGCE-205ENST00000437425 MYOM1P52179 1685 aa20.86■□□□□ 0.93
SGCE-205ENST00000437425 NLRP13Q86W25 1043 aa20.85■□□□□ 0.93
SGCE-205ENST00000437425 TMC1Q8TDI8 760 aa20.85■□□□□ 0.93
SGCE-205ENST00000437425 DLC1Q96QB1 1528 aa20.85■□□□□ 0.93
SGCE-205ENST00000437425 UBR1Q8IWV7 1749 aa20.85■□□□□ 0.93
SGCE-205ENST00000437425 TMEM2Q9UHN6 1383 aa20.85■□□□□ 0.93
SGCE-205ENST00000437425 C3P01024 1663 aa20.84■□□□□ 0.93
SGCE-205ENST00000437425 NINLQ9Y2I6 1382 aa20.83■□□□□ 0.93
SGCE-205ENST00000437425 LRPPRCP42704 1394 aaKnown RBP20.82■□□□□ 0.92
SGCE-205ENST00000437425 PTPRMP28827 1452 aa20.81■□□□□ 0.92
SGCE-205ENST00000437425 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
SGCE-205ENST00000437425 CCDC184Q52MB2 194 aa20.81■□□□□ 0.92
SGCE-205ENST00000437425 HNRNPUQ00839 825 aaKnown RBP eCLIP20.8■□□□□ 0.92
SGCE-205ENST00000437425 ABCC11Q96J66 1382 aa20.8■□□□□ 0.92
SGCE-205ENST00000437425 GTF3C3Q9Y5Q9 886 aa20.79■□□□□ 0.92
SGCE-205ENST00000437425 SETD1AO15047 1707 aaKnown RBP20.79■□□□□ 0.92
SGCE-205ENST00000437425 FAM9BQ8IZU0 186 aa20.78■□□□□ 0.92
SGCE-205ENST00000437425 SIRT1Q96EB6 747 aa20.78■□□□□ 0.92
SGCE-205ENST00000437425 POGKQ9P215 609 aa20.78■□□□□ 0.92
SGCE-205ENST00000437425 AMER1Q5JTC6 1135 aaPredicted RBP20.78■□□□□ 0.92
SGCE-205ENST00000437425 INSRP06213 1382 aa20.77■□□□□ 0.92
SGCE-205ENST00000437425 PNISRQ8TF01 805 aaKnown RBP20.77■□□□□ 0.92
SGCE-205ENST00000437425 NRXN3Q9Y4C0 1643 aa20.76■□□□□ 0.91
SGCE-205ENST00000437425 ATAD2Q6PL18 1390 aa20.76■□□□□ 0.91
SGCE-205ENST00000437425 PLEKHG1Q9ULL1 1385 aa20.76■□□□□ 0.91
SGCE-205ENST00000437425 SLIT1O75093 1534 aa20.76■□□□□ 0.91
SGCE-205ENST00000437425 STK26Q9P289 416 aa20.76■□□□□ 0.91
SGCE-205ENST00000437425 EID1Q9Y6B2 187 aa20.76■□□□□ 0.91
SGCE-205ENST00000437425 TULP4Q9NRJ4 1543 aa20.75■□□□□ 0.91
SGCE-205ENST00000437425 CC2D1BQ5T0F9 858 aaKnown RBP20.75■□□□□ 0.91
SGCE-205ENST00000437425 THEMISQ8N1K5 641 aaPredicted RBP20.75■□□□□ 0.91
SGCE-205ENST00000437425 PRAM1Q96QH2 718 aa20.74■□□□□ 0.91
SGCE-205ENST00000437425 ARHGAP23Q9P227 1491 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms