RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 STRCP1A6NGW2 1772 aa27.49■■□□□ 1.99
HMGN1-207ENST00000436324 MYO5BQ9ULV0 1848 aa27.48■■□□□ 1.99
HMGN1-207ENST00000436324 SCAF1Q9H7N4 1312 aaKnown RBP27.48■■□□□ 1.99
HMGN1-207ENST00000436324 ZFYVE9O95405 1425 aa27.48■■□□□ 1.99
HMGN1-207ENST00000436324 PIP4K2BP78356 416 aa27.46■■□□□ 1.99
HMGN1-207ENST00000436324 LRRC7Q96NW7 1537 aa27.46■■□□□ 1.99
HMGN1-207ENST00000436324 TOM1O60784 492 aa27.45■■□□□ 1.98
HMGN1-207ENST00000436324 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.45■■□□□ 1.98
HMGN1-207ENST00000436324 SLC4A1APQ9BWU0 796 aaKnown RBP27.44■■□□□ 1.98
HMGN1-207ENST00000436324 PLEKHG1Q9ULL1 1385 aa27.42■■□□□ 1.98
HMGN1-207ENST00000436324 SPHKAPQ2M3C7 1700 aa27.41■■□□□ 1.98
HMGN1-207ENST00000436324 KCNA6P17658 529 aa27.4■■□□□ 1.98
HMGN1-207ENST00000436324 ZNF326Q5BKZ1 582 aaKnown RBP27.4■■□□□ 1.98
HMGN1-207ENST00000436324 FOXD1Q16676 465 aa27.36■■□□□ 1.97
HMGN1-207ENST00000436324 PROSER2Q86WR7 435 aaPredicted RBP27.36■■□□□ 1.97
HMGN1-207ENST00000436324 RBM33Q96EV2 1170 aaKnown RBP27.36■■□□□ 1.97
HMGN1-207ENST00000436324 CLTCL1P53675 1640 aa27.34■■□□□ 1.97
HMGN1-207ENST00000436324 TRPM2O94759 1503 aa27.33■■□□□ 1.97
HMGN1-207ENST00000436324 TBX22Q9Y458 520 aa27.32■■□□□ 1.96
HMGN1-207ENST00000436324 TMEM94Q12767 1356 aa27.31■■□□□ 1.96
HMGN1-207ENST00000436324 HSPA1LP34931 641 aa27.29■■□□□ 1.96
HMGN1-207ENST00000436324 MPHOSPH9Q99550 1183 aa27.29■■□□□ 1.96
HMGN1-207ENST00000436324 ADAMTS13Q76LX8 1427 aa27.29■■□□□ 1.96
HMGN1-207ENST00000436324 ALKQ9UM73 1620 aa27.28■■□□□ 1.96
HMGN1-207ENST00000436324 SETD5Q9C0A6 1442 aa27.28■■□□□ 1.96
HMGN1-207ENST00000436324 NWD1Q149M9 1564 aa27.24■■□□□ 1.95
HMGN1-207ENST00000436324 XIRP1Q702N8 1843 aaKnown RBP27.24■■□□□ 1.95
HMGN1-207ENST00000436324 NKTRP30414 1462 aaKnown RBP27.23■■□□□ 1.95
HMGN1-207ENST00000436324 KIF1BO60333 1816 aa27.2■■□□□ 1.95
HMGN1-207ENST00000436324 RAB3GAP2Q9H2M9 1393 aa27.2■■□□□ 1.94
HMGN1-207ENST00000436324 DIP2AQ14689 1571 aa27.19■■□□□ 1.94
HMGN1-207ENST00000436324 CHD2O14647 1828 aaKnown RBP27.19■■□□□ 1.94
HMGN1-207ENST00000436324 NEXMIFQ5QGS0 1516 aa27.19■■□□□ 1.94
HMGN1-207ENST00000436324 AMOTL2Q9Y2J4 779 aa27.18■■□□□ 1.94
HMGN1-207ENST00000436324 DISP3Q9P2K9 1392 aa27.18■■□□□ 1.94
HMGN1-207ENST00000436324 PIK3R4Q99570 1358 aa27.17■■□□□ 1.94
HMGN1-207ENST00000436324 C14orf37Q86TY3 774 aa27.16■■□□□ 1.94
HMGN1-207ENST00000436324 PTPRUQ92729 1446 aa27.16■■□□□ 1.94
HMGN1-207ENST00000436324 MSH6P52701 1360 aa27.15■■□□□ 1.94
HMGN1-207ENST00000436324 CCDC144AA2RUR9 1427 aa27.15■■□□□ 1.94
HMGN1-207ENST00000436324 ACIN1Q9UKV3 1341 aaKnown RBP27.15■■□□□ 1.94
HMGN1-207ENST00000436324 SETBP1Q9Y6X0 1596 aa27.14■■□□□ 1.94
HMGN1-207ENST00000436324 VGFO15240 615 aaPredicted RBP27.14■■□□□ 1.94
HMGN1-207ENST00000436324 RGL3Q3MIN7 710 aa27.14■■□□□ 1.94
HMGN1-207ENST00000436324 NRXN3Q9Y4C0 1643 aa27.14■■□□□ 1.94
HMGN1-207ENST00000436324 RPGRIP1LQ68CZ1 1315 aa27.13■■□□□ 1.93
HMGN1-207ENST00000436324 METP08581 1390 aa27.12■■□□□ 1.93
HMGN1-207ENST00000436324 SLAIN2Q9P270 581 aa27.06■■□□□ 1.92
HMGN1-207ENST00000436324 FAM135BQ49AJ0 1406 aa27.06■■□□□ 1.92
HMGN1-207ENST00000436324 NCOA3Q9Y6Q9 1424 aa27.05■■□□□ 1.92
HMGN1-207ENST00000436324 C19orf44Q9H6X5 657 aa27.03■■□□□ 1.92
HMGN1-207ENST00000436324 SPATA31E1Q6ZUB1 1445 aa27.02■■□□□ 1.92
HMGN1-207ENST00000436324 ATF3P18847 181 aa27.02■■□□□ 1.92
HMGN1-207ENST00000436324 ADGRF5Q8IZF2 1346 aa27.01■■□□□ 1.91
HMGN1-207ENST00000436324 XRN1Q8IZH2 1706 aaKnown RBP27■■□□□ 1.91
HMGN1-207ENST00000436324 PPLO60437 1756 aa26.99■■□□□ 1.91
HMGN1-207ENST00000436324 CADPS2Q86UW7 1296 aa26.99■■□□□ 1.91
HMGN1-207ENST00000436324 ROBO1Q9Y6N7 1651 aa26.98■■□□□ 1.91
HMGN1-207ENST00000436324 HRCP23327 699 aa26.96■■□□□ 1.91
HMGN1-207ENST00000436324 ANKRD30BQ9BXX2 1392 aa26.96■■□□□ 1.91
HMGN1-207ENST00000436324 ILDR2Q71H61 639 aa26.95■■□□□ 1.9
HMGN1-207ENST00000436324 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.95■■□□□ 1.9
HMGN1-207ENST00000436324 MED1Q15648 1581 aaPredicted RBP26.92■■□□□ 1.9
HMGN1-207ENST00000436324 SETD1AO15047 1707 aaKnown RBP26.9■■□□□ 1.9
HMGN1-207ENST00000436324 ROBO2Q9HCK4 1378 aa26.9■■□□□ 1.9
HMGN1-207ENST00000436324 STK26Q9P289 416 aa26.88■■□□□ 1.89
HMGN1-207ENST00000436324 TMEM132EQ6IEE7 984 aa26.87■■□□□ 1.89
HMGN1-207ENST00000436324 ADGRL3Q9HAR2 1447 aa26.86■■□□□ 1.89
HMGN1-207ENST00000436324 IFT172Q9UG01 1749 aa26.86■■□□□ 1.89
HMGN1-207ENST00000436324 DCCP43146 1447 aa26.85■■□□□ 1.89
HMGN1-207ENST00000436324 PTCH1Q13635 1447 aa26.85■■□□□ 1.89
HMGN1-207ENST00000436324 PHF23Q9BUL5 403 aaPredicted RBP26.85■■□□□ 1.89
HMGN1-207ENST00000436324 BRINP3Q76B58 766 aa26.84■■□□□ 1.89
HMGN1-207ENST00000436324 PIK3C2GO75747 1445 aa26.83■■□□□ 1.89
HMGN1-207ENST00000436324 PHLPP1O60346 1717 aa26.82■■□□□ 1.88
HMGN1-207ENST00000436324 MST1RQ04912 1400 aa26.82■■□□□ 1.88
HMGN1-207ENST00000436324 CFAP70Q5T0N1 1121 aa26.8■■□□□ 1.88
HMGN1-207ENST00000436324 KDM2AQ9Y2K7 1162 aa26.8■■□□□ 1.88
HMGN1-207ENST00000436324 NALCNQ8IZF0 1738 aa26.79■■□□□ 1.88
HMGN1-207ENST00000436324 C14orf93Q9H972 538 aaKnown RBP26.79■■□□□ 1.88
HMGN1-207ENST00000436324 WAPLQ7Z5K2 1190 aa26.78■■□□□ 1.88
HMGN1-207ENST00000436324 LRPPRCP42704 1394 aaKnown RBP26.78■■□□□ 1.88
HMGN1-207ENST00000436324 PRAG1Q86YV5 1406 aa26.77■■□□□ 1.88
HMGN1-207ENST00000436324 ASXL1Q8IXJ9 1541 aa26.76■■□□□ 1.87
HMGN1-207ENST00000436324 MYOM2P54296 1465 aa26.76■■□□□ 1.87
HMGN1-207ENST00000436324 DCAF11Q8TEB1 546 aa26.76■■□□□ 1.87
HMGN1-207ENST00000436324 JCADQ9P266 1359 aa26.75■■□□□ 1.87
HMGN1-207ENST00000436324 DDX17Q92841 729 aaKnown RBP26.74■■□□□ 1.87
HMGN1-207ENST00000436324 NRXN1Q9ULB1 1477 aa26.74■■□□□ 1.87
HMGN1-207ENST00000436324 YTHDC2Q9H6S0 1430 aaKnown RBP26.73■■□□□ 1.87
HMGN1-207ENST00000436324 ABCC11Q96J66 1382 aa26.73■■□□□ 1.87
HMGN1-207ENST00000436324 COL16A1Q07092 1604 aaPredicted RBP26.72■■□□□ 1.87
HMGN1-207ENST00000436324 PLEKHH1Q9ULM0 1364 aa26.72■■□□□ 1.87
HMGN1-207ENST00000436324 AHDC1Q5TGY3 1603 aaPredicted RBP26.72■■□□□ 1.87
HMGN1-207ENST00000436324 C1orf167Q5SNV9 1468 aa26.71■■□□□ 1.87
HMGN1-207ENST00000436324 TECPR2O15040 1411 aa26.71■■□□□ 1.87
HMGN1-207ENST00000436324 DHX57Q6P158 1386 aaKnown RBP26.71■■□□□ 1.87
HMGN1-207ENST00000436324 ORAI2Q96SN7 254 aa26.69■■□□□ 1.86
HMGN1-207ENST00000436324 NUTM2FA1L443 756 aa26.67■■□□□ 1.86
HMGN1-207ENST00000436324 SAFB2Q14151 953 aaKnown RBP eCLIP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms