RNA–Protein interactions for RNA: ENST00000435795.5

TSSC4-204, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-204ENST00000435795 DCAF11Q8TEB1 546 aa22.55■■□□□ 1.2
TSSC4-204ENST00000435795 L3MBTL2Q969R5 705 aa22.55■■□□□ 1.2
TSSC4-204ENST00000435795 KDM2AQ9Y2K7 1162 aa22.54■■□□□ 1.2
TSSC4-204ENST00000435795 ZNF142P52746 1687 aaPredicted RBP22.54■■□□□ 1.2
TSSC4-204ENST00000435795 UBR1Q8IWV7 1749 aa22.54■■□□□ 1.2
TSSC4-204ENST00000435795 KIF1BO60333 1816 aa22.53■■□□□ 1.2
TSSC4-204ENST00000435795 VGFO15240 615 aaPredicted RBP22.53■■□□□ 1.2
TSSC4-204ENST00000435795 LTKP29376 864 aa22.53■■□□□ 1.2
TSSC4-204ENST00000435795 NEURL4Q96JN8 1562 aa22.53■■□□□ 1.2
TSSC4-204ENST00000435795 TIMELESSQ9UNS1 1208 aa22.52■■□□□ 1.2
TSSC4-204ENST00000435795 STAC3Q96MF2 364 aa22.51■■□□□ 1.19
TSSC4-204ENST00000435795 ARHGAP23Q9P227 1491 aa22.51■■□□□ 1.19
TSSC4-204ENST00000435795 KDM5AP29375 1690 aaKnown RBP22.51■■□□□ 1.19
TSSC4-204ENST00000435795 NCKAP5LQ9HCH0 1330 aa22.51■■□□□ 1.19
TSSC4-204ENST00000435795 SLIT1O75093 1534 aa22.5■■□□□ 1.19
TSSC4-204ENST00000435795 ZFYVE9O95405 1425 aa22.49■■□□□ 1.19
TSSC4-204ENST00000435795 BCANQ96GW7 911 aa22.49■■□□□ 1.19
TSSC4-204ENST00000435795 ADGRF5Q8IZF2 1346 aa22.47■■□□□ 1.19
TSSC4-204ENST00000435795 SCAF11Q99590 1463 aaKnown RBP22.47■■□□□ 1.19
TSSC4-204ENST00000435795 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
TSSC4-204ENST00000435795 NEXMIFQ5QGS0 1516 aa22.46■■□□□ 1.19
TSSC4-204ENST00000435795 MYO5BQ9ULV0 1848 aa22.43■■□□□ 1.18
TSSC4-204ENST00000435795 PLEKHG1Q9ULL1 1385 aa22.42■■□□□ 1.18
TSSC4-204ENST00000435795 MYOM2P54296 1465 aa22.41■■□□□ 1.18
TSSC4-204ENST00000435795 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
TSSC4-204ENST00000435795 DMRT2Q9Y5R5 561 aa22.38■■□□□ 1.17
TSSC4-204ENST00000435795 SLC26A8Q96RN1 970 aa22.37■■□□□ 1.17
TSSC4-204ENST00000435795 MED14O60244 1454 aa22.36■■□□□ 1.17
TSSC4-204ENST00000435795 NBPF8Q3BBV2 869 aa22.35■■□□□ 1.17
TSSC4-204ENST00000435795 CFAP70Q5T0N1 1121 aa22.35■■□□□ 1.17
TSSC4-204ENST00000435795 C14orf93Q9H972 538 aaKnown RBP22.35■■□□□ 1.17
TSSC4-204ENST00000435795 PPLO60437 1756 aa22.35■■□□□ 1.17
TSSC4-204ENST00000435795 NRXN1Q9ULB1 1477 aa22.34■■□□□ 1.17
TSSC4-204ENST00000435795 PRAG1Q86YV5 1406 aa22.34■■□□□ 1.17
TSSC4-204ENST00000435795 TBX22Q9Y458 520 aa22.34■■□□□ 1.17
TSSC4-204ENST00000435795 PIK3C2GO75747 1445 aa22.33■■□□□ 1.17
TSSC4-204ENST00000435795 ZEB1P37275 1124 aaPredicted RBP22.33■■□□□ 1.17
TSSC4-204ENST00000435795 ADAMTS13Q76LX8 1427 aa22.31■■□□□ 1.16
TSSC4-204ENST00000435795 IFT172Q9UG01 1749 aa22.31■■□□□ 1.16
TSSC4-204ENST00000435795 SETBP1Q9Y6X0 1596 aa22.29■■□□□ 1.16
TSSC4-204ENST00000435795 TMEM132EQ6IEE7 984 aa22.27■■□□□ 1.16
TSSC4-204ENST00000435795 STRCQ7RTU9 1775 aa22.27■■□□□ 1.16
TSSC4-204ENST00000435795 POLR1AO95602 1720 aaPredicted RBP22.26■■□□□ 1.15
TSSC4-204ENST00000435795 NBPF1Q3BBV0 1214 aa22.26■■□□□ 1.15
TSSC4-204ENST00000435795 METP08581 1390 aa22.25■■□□□ 1.15
TSSC4-204ENST00000435795 ALKQ9UM73 1620 aa22.25■■□□□ 1.15
TSSC4-204ENST00000435795 IQGAP1P46940 1657 aa22.24■■□□□ 1.15
TSSC4-204ENST00000435795 ROCK2O75116 1388 aaKnown RBP22.23■■□□□ 1.15
TSSC4-204ENST00000435795 NRXN3Q9Y4C0 1643 aa22.22■■□□□ 1.15
TSSC4-204ENST00000435795 STK26Q9P289 416 aa22.22■■□□□ 1.15
TSSC4-204ENST00000435795 PIK3R4Q99570 1358 aa22.22■■□□□ 1.15
TSSC4-204ENST00000435795 KCNA6P17658 529 aa22.21■■□□□ 1.15
TSSC4-204ENST00000435795 AMOTL2Q9Y2J4 779 aa22.21■■□□□ 1.15
TSSC4-204ENST00000435795 DIP2AQ14689 1571 aa22.21■■□□□ 1.15
TSSC4-204ENST00000435795 CARD11Q9BXL7 1154 aa22.2■■□□□ 1.14
TSSC4-204ENST00000435795 RALGAPBQ86X10 1494 aa22.18■■□□□ 1.14
TSSC4-204ENST00000435795 LRPPRCP42704 1394 aaKnown RBP22.18■■□□□ 1.14
TSSC4-204ENST00000435795 PTPRUQ92729 1446 aa22.16■■□□□ 1.14
TSSC4-204ENST00000435795 YTHDC2Q9H6S0 1430 aaKnown RBP22.16■■□□□ 1.14
TSSC4-204ENST00000435795 ZNF335Q9H4Z2 1342 aaPredicted RBP22.16■■□□□ 1.14
TSSC4-204ENST00000435795 TRAK1Q9UPV9 953 aa22.16■■□□□ 1.14
TSSC4-204ENST00000435795 GPRASP1Q5JY77 1395 aa22.15■■□□□ 1.14
TSSC4-204ENST00000435795 LAMC1P11047 1609 aa22.15■■□□□ 1.14
TSSC4-204ENST00000435795 ABCC11Q96J66 1382 aa22.14■■□□□ 1.14
TSSC4-204ENST00000435795 ADGRB1O14514 1584 aa22.14■■□□□ 1.13
TSSC4-204ENST00000435795 ASXL1Q8IXJ9 1541 aa22.13■■□□□ 1.13
TSSC4-204ENST00000435795 KIAA1210Q9ULL0 1709 aa22.13■■□□□ 1.13
TSSC4-204ENST00000435795 TRPM1Q7Z4N2 1603 aa22.12■■□□□ 1.13
TSSC4-204ENST00000435795 SIRT1Q96EB6 747 aa22.11■■□□□ 1.13
TSSC4-204ENST00000435795 PROSER2Q86WR7 435 aaPredicted RBP22.1■■□□□ 1.13
TSSC4-204ENST00000435795 POGKQ9P215 609 aa22.1■■□□□ 1.13
TSSC4-204ENST00000435795 SETD1AO15047 1707 aaKnown RBP22.09■■□□□ 1.13
TSSC4-204ENST00000435795 WAPLQ7Z5K2 1190 aa22.08■■□□□ 1.13
TSSC4-204ENST00000435795 PRAM1Q96QH2 718 aa22.08■■□□□ 1.13
TSSC4-204ENST00000435795 ROBO2Q9HCK4 1378 aa22.08■■□□□ 1.12
TSSC4-204ENST00000435795 TECPR2O15040 1411 aa22.07■■□□□ 1.12
TSSC4-204ENST00000435795 FBXO41Q8TF61 875 aa22.07■■□□□ 1.12
TSSC4-204ENST00000435795 EIF3AQ14152 1382 aaKnown RBP22.05■■□□□ 1.12
TSSC4-204ENST00000435795 PTCH1Q13635 1447 aa22.05■■□□□ 1.12
TSSC4-204ENST00000435795 USP47Q96K76 1375 aa22.04■■□□□ 1.12
TSSC4-204ENST00000435795 SAFB2Q14151 953 aaKnown RBP eCLIP22.04■■□□□ 1.12
TSSC4-204ENST00000435795 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
TSSC4-204ENST00000435795 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
TSSC4-204ENST00000435795 FAM135BQ49AJ0 1406 aa22.03■■□□□ 1.12
TSSC4-204ENST00000435795 NWD1Q149M9 1564 aa22.03■■□□□ 1.12
TSSC4-204ENST00000435795 CENPJQ9HC77 1338 aaPredicted RBP22.03■■□□□ 1.12
TSSC4-204ENST00000435795 NKTRP30414 1462 aaKnown RBP22.03■■□□□ 1.12
TSSC4-204ENST00000435795 PLEKHH1Q9ULM0 1364 aa22.02■■□□□ 1.12
TSSC4-204ENST00000435795 DLC1Q96QB1 1528 aa22.02■■□□□ 1.12
TSSC4-204ENST00000435795 CHD2O14647 1828 aaKnown RBP22.02■■□□□ 1.12
TSSC4-204ENST00000435795 C14orf37Q86TY3 774 aa22.02■■□□□ 1.12
TSSC4-204ENST00000435795 TMEM94Q12767 1356 aa22.01■■□□□ 1.11
TSSC4-204ENST00000435795 XRN1Q8IZH2 1706 aaKnown RBP22■■□□□ 1.11
TSSC4-204ENST00000435795 ST20-MTHFSA0A0A6YYL1 179 aa22■■□□□ 1.11
TSSC4-204ENST00000435795 CPS1P31327 1500 aa22■■□□□ 1.11
TSSC4-204ENST00000435795 HSPA5P11021 654 aaKnown RBP21.99■■□□□ 1.11
TSSC4-204ENST00000435795 MINK1Q8N4C8 1332 aaPredicted RBP21.97■■□□□ 1.11
TSSC4-204ENST00000435795 LRRC7Q96NW7 1537 aa21.96■■□□□ 1.11
TSSC4-204ENST00000435795 LTBP4Q8N2S1 1624 aa21.96■■□□□ 1.11
TSSC4-204ENST00000435795 NCOA3Q9Y6Q9 1424 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms