RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 QTRT2Q9H974 415 aaKnown RBP16.79■□□□□ 0.28
CPNE1-214ENST00000435747 EFCAB6Q5THR3 1501 aa16.78■□□□□ 0.28
CPNE1-214ENST00000435747 BCANQ96GW7 911 aa16.77■□□□□ 0.28
CPNE1-214ENST00000435747 EHBP1L1Q8N3D4 1523 aa16.76■□□□□ 0.27
CPNE1-214ENST00000435747 C14orf37Q86TY3 774 aa16.76■□□□□ 0.27
CPNE1-214ENST00000435747 EP400Q96L91 3159 aa16.76■□□□□ 0.27
CPNE1-214ENST00000435747 ARHGEF5Q12774 1597 aa16.76■□□□□ 0.27
CPNE1-214ENST00000435747 DIP2AQ14689 1571 aa16.76■□□□□ 0.27
CPNE1-214ENST00000435747 C8orf37Q96NL8 207 aa16.75■□□□□ 0.27
CPNE1-214ENST00000435747 ARHGAP31Q2M1Z3 1444 aa16.75■□□□□ 0.27
CPNE1-214ENST00000435747 CHD2O14647 1828 aaKnown RBP16.75■□□□□ 0.27
CPNE1-214ENST00000435747 CEP162Q5TB80 1403 aa16.74■□□□□ 0.27
CPNE1-214ENST00000435747 NGLY1Q96IV0 654 aa16.74■□□□□ 0.27
CPNE1-214ENST00000435747 CADPS2Q86UW7 1296 aa16.73■□□□□ 0.27
CPNE1-214ENST00000435747 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
CPNE1-214ENST00000435747 ATF3P18847 181 aa16.72■□□□□ 0.27
CPNE1-214ENST00000435747 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.72■□□□□ 0.27
CPNE1-214ENST00000435747 IDI1Q13907 227 aa16.69■□□□□ 0.26
CPNE1-214ENST00000435747 MAST1Q9Y2H9 1570 aa16.68■□□□□ 0.26
CPNE1-214ENST00000435747 BRINP3Q76B58 766 aa16.68■□□□□ 0.26
CPNE1-214ENST00000435747 CCDC125Q86Z20 511 aa16.68■□□□□ 0.26
CPNE1-214ENST00000435747 C19orf44Q9H6X5 657 aa16.68■□□□□ 0.26
CPNE1-214ENST00000435747 SETD5Q9C0A6 1442 aa16.67■□□□□ 0.26
CPNE1-214ENST00000435747 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
CPNE1-214ENST00000435747 LRP5O75197 1615 aa16.65■□□□□ 0.26
CPNE1-214ENST00000435747 LRRC59Q96AG4 307 aaKnown RBP16.64■□□□□ 0.25
CPNE1-214ENST00000435747 DUOX2Q9NRD8 1548 aa16.64■□□□□ 0.25
CPNE1-214ENST00000435747 ASXL1Q8IXJ9 1541 aa16.63■□□□□ 0.25
CPNE1-214ENST00000435747 PLEKHG1Q9ULL1 1385 aa16.63■□□□□ 0.25
CPNE1-214ENST00000435747 PPP1R15AO75807 674 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-214ENST00000435747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.252e-14■□□□□ 8.9
CPNE1-214ENST00000435747 NHSL1Q5SYE7 1610 aa16.62■□□□□ 0.25
CPNE1-214ENST00000435747 ADAMTS2O95450 1211 aa16.61■□□□□ 0.25
CPNE1-214ENST00000435747 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
CPNE1-214ENST00000435747 PNPLA6Q8IY17 1366 aa16.61■□□□□ 0.25
CPNE1-214ENST00000435747 USP21Q9UK80 565 aa16.6■□□□□ 0.25
CPNE1-214ENST00000435747 KANK1Q14678 1352 aa16.6■□□□□ 0.25
CPNE1-214ENST00000435747 TBX22Q9Y458 520 aa16.59■□□□□ 0.25
CPNE1-214ENST00000435747 MYO5BQ9ULV0 1848 aa16.57■□□□□ 0.24
CPNE1-214ENST00000435747 ZFYVE9O95405 1425 aa16.57■□□□□ 0.24
CPNE1-214ENST00000435747 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
CPNE1-214ENST00000435747 DCCP43146 1447 aa16.55■□□□□ 0.24
CPNE1-214ENST00000435747 ERBINQ96RT1 1412 aa16.55■□□□□ 0.24
CPNE1-214ENST00000435747 RIMS2Q9UQ26 1411 aa16.55■□□□□ 0.24
CPNE1-214ENST00000435747 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
CPNE1-214ENST00000435747 ATRNO75882 1429 aa16.54■□□□□ 0.24
CPNE1-214ENST00000435747 NOS1P29475 1434 aa16.54■□□□□ 0.24
CPNE1-214ENST00000435747 KIF15Q9NS87 1388 aa16.54■□□□□ 0.24
CPNE1-214ENST00000435747 PIK3R4Q99570 1358 aa16.53■□□□□ 0.24
CPNE1-214ENST00000435747 LMTK2Q8IWU2 1503 aa16.53■□□□□ 0.24
CPNE1-214ENST00000435747 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-214ENST00000435747 MST1RQ04912 1400 aa16.53■□□□□ 0.24
CPNE1-214ENST00000435747 DDX17Q92841 729 aaKnown RBP16.52■□□□□ 0.24
CPNE1-214ENST00000435747 GCC2Q8IWJ2 1684 aa16.5■□□□□ 0.23
CPNE1-214ENST00000435747 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
CPNE1-214ENST00000435747 DEFB132Q7Z7B7 95 aa16.5■□□□□ 0.23
CPNE1-214ENST00000435747 FNBP4Q8N3X1 1017 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-214ENST00000435747 ADAMTS13Q76LX8 1427 aa16.5■□□□□ 0.23
CPNE1-214ENST00000435747 SF3B2Q13435 895 aaKnown RBP16.49■□□□□ 0.23
CPNE1-214ENST00000435747 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
CPNE1-214ENST00000435747 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
CPNE1-214ENST00000435747 RRP7BPQ9NSQ0 103 aa16.49■□□□□ 0.23
CPNE1-214ENST00000435747 AMOTL2Q9Y2J4 779 aa16.49■□□□□ 0.23
CPNE1-214ENST00000435747 TRPM2O94759 1503 aa16.47■□□□□ 0.23
CPNE1-214ENST00000435747 MYOM3Q5VTT5 1437 aa16.46■□□□□ 0.23
CPNE1-214ENST00000435747 VPS8Q8N3P4 1428 aa16.46■□□□□ 0.23
CPNE1-214ENST00000435747 PSDA5PKW4 1024 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-214ENST00000435747 YY1P25490 414 aa16.46■□□□□ 0.23
CPNE1-214ENST00000435747 TMEM131LA2VDJ0 1609 aa16.45■□□□□ 0.22
CPNE1-214ENST00000435747 HRCP23327 699 aa16.45■□□□□ 0.22
CPNE1-214ENST00000435747 PTPRUQ92729 1446 aa16.44■□□□□ 0.22
CPNE1-214ENST00000435747 GJD4Q96KN9 370 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-214ENST00000435747 CROCC2H7BZ55 1655 aa16.43■□□□□ 0.22
CPNE1-214ENST00000435747 CHGAP10645 457 aaKnown RBP16.42■□□□□ 0.22
CPNE1-214ENST00000435747 UNC13BO14795 1591 aa16.41■□□□□ 0.22
CPNE1-214ENST00000435747 BCL9LQ86UU0 1499 aa16.41■□□□□ 0.22
CPNE1-214ENST00000435747 BRWD3Q6RI45 1802 aa16.4■□□□□ 0.22
CPNE1-214ENST00000435747 XRN1Q8IZH2 1706 aaKnown RBP16.4■□□□□ 0.22
CPNE1-214ENST00000435747 RPRD2Q5VT52 1461 aaKnown RBP16.4■□□□□ 0.22
CPNE1-214ENST00000435747 LAMC1P11047 1609 aa16.39■□□□□ 0.21
CPNE1-214ENST00000435747 MARF1Q9Y4F3 1742 aaKnown RBP16.39■□□□□ 0.21
CPNE1-214ENST00000435747 COL22A1Q8NFW1 1626 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-214ENST00000435747 ADGRL3Q9HAR2 1447 aa16.38■□□□□ 0.21
CPNE1-214ENST00000435747 SOS2Q07890 1332 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-214ENST00000435747 SPHKAPQ2M3C7 1700 aa16.37■□□□□ 0.21
CPNE1-214ENST00000435747 ABCC5O15440 1437 aa16.36■□□□□ 0.21
CPNE1-214ENST00000435747 C1orf167Q5SNV9 1468 aa16.36■□□□□ 0.21
CPNE1-214ENST00000435747 IFFO2Q5TF58 517 aa16.36■□□□□ 0.21
CPNE1-214ENST00000435747 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.36■□□□□ 0.21
CPNE1-214ENST00000435747 NALCNQ8IZF0 1738 aa16.35■□□□□ 0.21
CPNE1-214ENST00000435747 MYOM2P54296 1465 aa16.35■□□□□ 0.21
CPNE1-214ENST00000435747 RALGAPBQ86X10 1494 aa16.35■□□□□ 0.21
CPNE1-214ENST00000435747 GLI3P10071 1580 aa16.34■□□□□ 0.21
CPNE1-214ENST00000435747 BAG6P46379 1132 aa16.34■□□□□ 0.21
CPNE1-214ENST00000435747 KANK4Q5T7N3 995 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-214ENST00000435747 ANKRD30AQ9BXX3 1397 aa16.32■□□□□ 0.2
CPNE1-214ENST00000435747 UNC5CLQ8IV45 518 aa16.31■□□□□ 0.2
CPNE1-214ENST00000435747 DAPK1P53355 1430 aa16.3■□□□□ 0.2
CPNE1-214ENST00000435747 SEPT12Q8IYM1 358 aa16.3■□□□□ 0.2
CPNE1-214ENST00000435747 ORAI2Q96SN7 254 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms