RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 LRRC7Q96NW7 1537 aa13.46□□□□□ -0.25
RPE-207ENST00000435437 TXNDC2Q86VQ3 553 aa13.46□□□□□ -0.25
RPE-207ENST00000435437 SLC52A1Q9NWF4 448 aa13.45□□□□□ -0.26
RPE-207ENST00000435437 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
RPE-207ENST00000435437 NRXN3Q9Y4C0 1643 aa13.43□□□□□ -0.26
RPE-207ENST00000435437 NWD1Q149M9 1564 aa13.42□□□□□ -0.26
RPE-207ENST00000435437 RIMS2Q9UQ26 1411 aa13.42□□□□□ -0.26
RPE-207ENST00000435437 TRPM2O94759 1503 aa13.42□□□□□ -0.26
RPE-207ENST00000435437 CHD2O14647 1828 aaKnown RBP13.41□□□□□ -0.26
RPE-207ENST00000435437 ADAMTS13Q76LX8 1427 aa13.41□□□□□ -0.26
RPE-207ENST00000435437 PLEKHG1Q9ULL1 1385 aa13.39□□□□□ -0.27
RPE-207ENST00000435437 NEXMIFQ5QGS0 1516 aa13.39□□□□□ -0.27
RPE-207ENST00000435437 NUTM2DQ5VT03 806 aaPredicted RBP13.38□□□□□ -0.27
RPE-207ENST00000435437 SLC26A8Q96RN1 970 aa13.38□□□□□ -0.27
RPE-207ENST00000435437 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
RPE-207ENST00000435437 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
RPE-207ENST00000435437 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
RPE-207ENST00000435437 PTPRUQ92729 1446 aa13.36□□□□□ -0.27
RPE-207ENST00000435437 KIF1BO60333 1816 aa13.35□□□□□ -0.27
RPE-207ENST00000435437 SETBP1Q9Y6X0 1596 aa13.34□□□□□ -0.27
RPE-207ENST00000435437 UBAP1LF5GYI3 381 aa13.34□□□□□ -0.27
RPE-207ENST00000435437 PPLO60437 1756 aa13.33□□□□□ -0.28
RPE-207ENST00000435437 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
RPE-207ENST00000435437 RBM33Q96EV2 1170 aaKnown RBP13.33□□□□□ -0.28
RPE-207ENST00000435437 SETD5Q9C0A6 1442 aa13.32□□□□□ -0.28
RPE-207ENST00000435437 KCNA6P17658 529 aa13.32□□□□□ -0.28
RPE-207ENST00000435437 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
RPE-207ENST00000435437 XRN1Q8IZH2 1706 aaKnown RBP13.32□□□□□ -0.28
RPE-207ENST00000435437 IFT172Q9UG01 1749 aa13.32□□□□□ -0.28
RPE-207ENST00000435437 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
RPE-207ENST00000435437 NKTRP30414 1462 aaKnown RBP13.31□□□□□ -0.28
RPE-207ENST00000435437 DIP2AQ14689 1571 aa13.31□□□□□ -0.28
RPE-207ENST00000435437 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
RPE-207ENST00000435437 TBX22Q9Y458 520 aa13.3□□□□□ -0.28
RPE-207ENST00000435437 RAB3GAP2Q9H2M9 1393 aa13.3□□□□□ -0.28
RPE-207ENST00000435437 SPATA31E1Q6ZUB1 1445 aa13.3□□□□□ -0.28
RPE-207ENST00000435437 MPHOSPH9Q99550 1183 aa13.29□□□□□ -0.28
RPE-207ENST00000435437 METP08581 1390 aa13.28□□□□□ -0.28
RPE-207ENST00000435437 HSPA1LP34931 641 aa13.27□□□□□ -0.29
RPE-207ENST00000435437 PIP4K2BP78356 416 aa13.26□□□□□ -0.29
RPE-207ENST00000435437 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.26□□□□□ -0.29
RPE-207ENST00000435437 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
RPE-207ENST00000435437 ASXL1Q8IXJ9 1541 aa13.24□□□□□ -0.29
RPE-207ENST00000435437 PIK3R4Q99570 1358 aa13.24□□□□□ -0.29
RPE-207ENST00000435437 TOM1O60784 492 aa13.24□□□□□ -0.29
RPE-207ENST00000435437 PPP1R15AO75807 674 aaPredicted RBP13.24□□□□□ -0.29
RPE-207ENST00000435437 PROSER2Q86WR7 435 aaPredicted RBP13.23□□□□□ -0.29
RPE-207ENST00000435437 ROBO1Q9Y6N7 1651 aa13.23□□□□□ -0.29
RPE-207ENST00000435437 NALCNQ8IZF0 1738 aa13.22□□□□□ -0.29
RPE-207ENST00000435437 ADGRF5Q8IZF2 1346 aa13.21□□□□□ -0.29
RPE-207ENST00000435437 MAPK8IP2Q13387 824 aaPredicted RBP13.21□□□□□ -0.29
RPE-207ENST00000435437 ZNF326Q5BKZ1 582 aaKnown RBP13.21□□□□□ -0.29
RPE-207ENST00000435437 BCANQ96GW7 911 aa13.21□□□□□ -0.29
RPE-207ENST00000435437 AMOTL2Q9Y2J4 779 aa13.21□□□□□ -0.29
RPE-207ENST00000435437 HDGFP51858 240 aaKnown RBP13.2□□□□□ -0.3
RPE-207ENST00000435437 CCDC144AA2RUR9 1427 aa13.2□□□□□ -0.3
RPE-207ENST00000435437 FAM135BQ49AJ0 1406 aa13.2□□□□□ -0.3
RPE-207ENST00000435437 PRAG1Q86YV5 1406 aa13.2□□□□□ -0.3
RPE-207ENST00000435437 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
RPE-207ENST00000435437 NCOA3Q9Y6Q9 1424 aa13.19□□□□□ -0.3
RPE-207ENST00000435437 MED1Q15648 1581 aaPredicted RBP13.19□□□□□ -0.3
RPE-207ENST00000435437 SCAF1Q9H7N4 1312 aaKnown RBP13.18□□□□□ -0.3
RPE-207ENST00000435437 NRXN1Q9ULB1 1477 aa13.18□□□□□ -0.3
RPE-207ENST00000435437 ILDR2Q71H61 639 aa13.18□□□□□ -0.3
RPE-207ENST00000435437 RPGRIP1LQ68CZ1 1315 aa13.17□□□□□ -0.3
RPE-207ENST00000435437 ROBO2Q9HCK4 1378 aa13.17□□□□□ -0.3
RPE-207ENST00000435437 PIK3C2GO75747 1445 aa13.16□□□□□ -0.3
RPE-207ENST00000435437 HRCP23327 699 aa13.16□□□□□ -0.3
RPE-207ENST00000435437 COL16A1Q07092 1604 aaPredicted RBP13.16□□□□□ -0.3
RPE-207ENST00000435437 RGL3Q3MIN7 710 aa13.15□□□□□ -0.3
RPE-207ENST00000435437 MSH6P52701 1360 aa13.15□□□□□ -0.3
RPE-207ENST00000435437 MST1RQ04912 1400 aa13.14□□□□□ -0.31
RPE-207ENST00000435437 KNDC1Q76NI1 1749 aa13.14□□□□□ -0.31
RPE-207ENST00000435437 PTCH1Q13635 1447 aa13.13□□□□□ -0.31
RPE-207ENST00000435437 MYOM2P54296 1465 aa13.13□□□□□ -0.31
RPE-207ENST00000435437 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
RPE-207ENST00000435437 SLAIN2Q9P270 581 aa13.13□□□□□ -0.31
RPE-207ENST00000435437 PHLPP1O60346 1717 aa13.13□□□□□ -0.31
RPE-207ENST00000435437 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
RPE-207ENST00000435437 DHX57Q6P158 1386 aaKnown RBP13.12□□□□□ -0.31
RPE-207ENST00000435437 DISP3Q9P2K9 1392 aa13.12□□□□□ -0.31
RPE-207ENST00000435437 AHDC1Q5TGY3 1603 aaPredicted RBP13.12□□□□□ -0.31
RPE-207ENST00000435437 NHSL1Q5SYE7 1610 aa13.11□□□□□ -0.31
RPE-207ENST00000435437 C19orf44Q9H6X5 657 aa13.11□□□□□ -0.31
RPE-207ENST00000435437 TECPR2O15040 1411 aa13.11□□□□□ -0.31
RPE-207ENST00000435437 DCCP43146 1447 aa13.11□□□□□ -0.31
RPE-207ENST00000435437 PLEKHH1Q9ULM0 1364 aa13.1□□□□□ -0.31
RPE-207ENST00000435437 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
RPE-207ENST00000435437 TMEM132EQ6IEE7 984 aa13.09□□□□□ -0.31
RPE-207ENST00000435437 LAMC1P11047 1609 aa13.09□□□□□ -0.31
RPE-207ENST00000435437 BRINP3Q76B58 766 aa13.08□□□□□ -0.32
RPE-207ENST00000435437 RGS17Q9UGC6 210 aaPredicted RBP13.08□□□□□ -0.32
RPE-207ENST00000435437 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
RPE-207ENST00000435437 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
RPE-207ENST00000435437 CFAP70Q5T0N1 1121 aa13.07□□□□□ -0.32
RPE-207ENST00000435437 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
RPE-207ENST00000435437 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
RPE-207ENST00000435437 LRP6O75581 1613 aa13.06□□□□□ -0.32
RPE-207ENST00000435437 YTHDC2Q9H6S0 1430 aaKnown RBP13.05□□□□□ -0.32
RPE-207ENST00000435437 C1orf167Q5SNV9 1468 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms