RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 PZPP20742 1482 aa10.51□□□□□ -0.73
HPS4-205ENST00000429411 SAFB2Q14151 953 aaKnown RBP eCLIP10.51□□□□□ -0.73
HPS4-205ENST00000429411 C20orf194Q5TEA3 1177 aa10.5□□□□□ -0.73
HPS4-205ENST00000429411 KIF14Q15058 1648 aa10.5□□□□□ -0.73
HPS4-205ENST00000429411 BRD4O60885 1362 aaPredicted RBP10.5□□□□□ -0.73
HPS4-205ENST00000429411 RRP7AQ9Y3A4 280 aaKnown RBP10.49□□□□□ -0.73
HPS4-205ENST00000429411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.49□□□□□ -0.73
HPS4-205ENST00000429411 SPATA31E1Q6ZUB1 1445 aa10.49□□□□□ -0.73
HPS4-205ENST00000429411 APAF1O14727 1248 aa10.48□□□□□ -0.73
HPS4-205ENST00000429411 GOLGA2Q08379 1002 aa10.47□□□□□ -0.73
HPS4-205ENST00000429411 PDE3BQ13370 1112 aa10.47□□□□□ -0.73
HPS4-205ENST00000429411 BCL2L13Q9BXK5 485 aa10.47□□□□□ -0.73
HPS4-205ENST00000429411 GCC2Q8IWJ2 1684 aa10.47□□□□□ -0.73
HPS4-205ENST00000429411 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
HPS4-205ENST00000429411 TTC37Q6PGP7 1564 aa10.46□□□□□ -0.73
HPS4-205ENST00000429411 TAF7LQ5H9L4 462 aa10.46□□□□□ -0.74
HPS4-205ENST00000429411 CLUAP1Q96AJ1 413 aa10.46□□□□□ -0.74
HPS4-205ENST00000429411 CDCA8Q53HL2 280 aa10.45□□□□□ -0.74
HPS4-205ENST00000429411 SAMD1Q6SPF0 538 aaPredicted RBP10.45□□□□□ -0.74
HPS4-205ENST00000429411 DISP3Q9P2K9 1392 aa10.45□□□□□ -0.74
HPS4-205ENST00000429411 DNMT1P26358 1616 aaKnown RBP10.45□□□□□ -0.74
HPS4-205ENST00000429411 RBM33Q96EV2 1170 aaKnown RBP10.45□□□□□ -0.74
HPS4-205ENST00000429411 CDK11BP21127 795 aaKnown RBP10.45□□□□□ -0.74
HPS4-205ENST00000429411 TRAK1Q9UPV9 953 aa10.45□□□□□ -0.74
HPS4-205ENST00000429411 SPRYD3Q8NCJ5 442 aa10.44□□□□□ -0.74
HPS4-205ENST00000429411 PPP2R1AP30153 589 aa10.43□□□□□ -0.74
HPS4-205ENST00000429411 RSPH4AQ5TD94 716 aa10.43□□□□□ -0.74
HPS4-205ENST00000429411 DDRGK1Q96HY6 314 aa10.43□□□□□ -0.74
HPS4-205ENST00000429411 PLCB2Q00722 1185 aa10.43□□□□□ -0.74
HPS4-205ENST00000429411 SYCP2Q9BX26 1530 aa10.43□□□□□ -0.74
HPS4-205ENST00000429411 CFAP70Q5T0N1 1121 aa10.43□□□□□ -0.74
HPS4-205ENST00000429411 PPM1GO15355 546 aaPredicted RBP10.42□□□□□ -0.74
HPS4-205ENST00000429411 BCAR3O75815 825 aa10.42□□□□□ -0.74
HPS4-205ENST00000429411 MORC1Q86VD1 984 aa10.42□□□□□ -0.74
HPS4-205ENST00000429411 BACH2Q9BYV9 841 aa10.42□□□□□ -0.74
HPS4-205ENST00000429411 TMEM132AQ24JP5 1023 aa10.42□□□□□ -0.74
HPS4-205ENST00000429411 COG6Q9Y2V7 657 aa10.42□□□□□ -0.74
HPS4-205ENST00000429411 POGZQ7Z3K3 1410 aa10.41□□□□□ -0.74
HPS4-205ENST00000429411 SLKQ9H2G2 1235 aaPredicted RBP10.41□□□□□ -0.74
HPS4-205ENST00000429411 U2SURPO15042 1029 aaKnown RBP10.41□□□□□ -0.74
HPS4-205ENST00000429411 STK26Q9P289 416 aa10.41□□□□□ -0.74
HPS4-205ENST00000429411 BRD2P25440 801 aaKnown RBP10.41□□□□□ -0.74
HPS4-205ENST00000429411 PLEKHH2Q8IVE3 1493 aa10.4□□□□□ -0.74
HPS4-205ENST00000429411 IL27Q8NEV9 243 aa10.4□□□□□ -0.74
HPS4-205ENST00000429411 ERBINQ96RT1 1412 aa10.4□□□□□ -0.75
HPS4-205ENST00000429411 PER1O15534 1290 aaPredicted RBP10.39□□□□□ -0.75
HPS4-205ENST00000429411 KIF13AQ9H1H9 1805 aa10.39□□□□□ -0.75
HPS4-205ENST00000429411 RALGAPBQ86X10 1494 aa10.39□□□□□ -0.75
HPS4-205ENST00000429411 BCORL1Q5H9F3 1711 aa10.39□□□□□ -0.75
HPS4-205ENST00000429411 TMEM132EQ6IEE7 984 aa10.39□□□□□ -0.75
HPS4-205ENST00000429411 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
HPS4-205ENST00000429411 ZNF518AQ6AHZ1 1483 aa10.39□□□□□ -0.75
HPS4-205ENST00000429411 ARHGEF12Q9NZN5 1544 aa10.39□□□□□ -0.75
HPS4-205ENST00000429411 TESK2Q96S53 571 aa10.39□□□□□ -0.75
HPS4-205ENST00000429411 NEO1Q92859 1461 aa10.38□□□□□ -0.75
HPS4-205ENST00000429411 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
HPS4-205ENST00000429411 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.38□□□□□ -0.75
HPS4-205ENST00000429411 U2AF1L5P0DN76 240 aaPredicted RBP10.37□□□□□ -0.75
HPS4-205ENST00000429411 U2AF1Q01081 240 aaKnown RBP eCLIP10.37□□□□□ -0.756e-11■■■■□ 21.2
HPS4-205ENST00000429411 SLC26A8Q96RN1 970 aa10.37□□□□□ -0.75
HPS4-205ENST00000429411 UPF2Q9HAU5 1272 aaKnown RBP10.37□□□□□ -0.75
HPS4-205ENST00000429411 CCDC141Q6ZP82 1450 aa10.37□□□□□ -0.75
HPS4-205ENST00000429411 CENPQQ7L2Z9 268 aaPredicted RBP10.37□□□□□ -0.75
HPS4-205ENST00000429411 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
HPS4-205ENST00000429411 MS4A1P11836 297 aa10.36□□□□□ -0.75
HPS4-205ENST00000429411 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
HPS4-205ENST00000429411 FGD1P98174 961 aa10.36□□□□□ -0.75
HPS4-205ENST00000429411 FTSJ3Q8IY81 847 aaKnown RBP10.36□□□□□ -0.75
HPS4-205ENST00000429411 KANK1Q14678 1352 aa10.36□□□□□ -0.75
HPS4-205ENST00000429411 RNF123Q5XPI4 1314 aa10.36□□□□□ -0.75
HPS4-205ENST00000429411 FAM161AQ3B820 660 aa10.35□□□□□ -0.75
HPS4-205ENST00000429411 CENPJQ9HC77 1338 aaPredicted RBP10.35□□□□□ -0.75
HPS4-205ENST00000429411 PRAG1Q86YV5 1406 aa10.35□□□□□ -0.75
HPS4-205ENST00000429411 PIP4K2BP78356 416 aa10.35□□□□□ -0.75
HPS4-205ENST00000429411 SLC12A5Q9H2X9 1139 aa10.35□□□□□ -0.75
HPS4-205ENST00000429411 LRPPRCP42704 1394 aaKnown RBP10.35□□□□□ -0.75
HPS4-205ENST00000429411 PARD3Q8TEW0 1356 aa10.35□□□□□ -0.75
HPS4-205ENST00000429411 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
HPS4-205ENST00000429411 DUSP27Q5VZP5 1158 aa10.34□□□□□ -0.75
HPS4-205ENST00000429411 CFAP53Q96M91 514 aa10.34□□□□□ -0.75
HPS4-205ENST00000429411 ZMYM3Q14202 1370 aa10.34□□□□□ -0.75
HPS4-205ENST00000429411 ATP10AO60312 1499 aa10.34□□□□□ -0.75
HPS4-205ENST00000429411 ITSN2Q9NZM3 1697 aa10.34□□□□□ -0.75
HPS4-205ENST00000429411 FAM135AQ9P2D6 1515 aa10.33□□□□□ -0.76
HPS4-205ENST00000429411 NFKBIBQ15653 356 aa10.33□□□□□ -0.76
HPS4-205ENST00000429411 TXNDC2Q86VQ3 553 aa10.33□□□□□ -0.76
HPS4-205ENST00000429411 SPINK5Q9NQ38 1064 aaPredicted RBP10.33□□□□□ -0.76
HPS4-205ENST00000429411 KDM5CP41229 1560 aa10.33□□□□□ -0.76
HPS4-205ENST00000429411 ZFYVE16Q7Z3T8 1539 aa10.33□□□□□ -0.76
HPS4-205ENST00000429411 NUTM2FA1L443 756 aa10.32□□□□□ -0.76
HPS4-205ENST00000429411 PLEKHH1Q9ULM0 1364 aa10.32□□□□□ -0.76
HPS4-205ENST00000429411 A2MP01023 1474 aa10.32□□□□□ -0.76
HPS4-205ENST00000429411 BRPF3Q9ULD4 1205 aa10.31□□□□□ -0.76
HPS4-205ENST00000429411 ABCA9Q8IUA7 1624 aa10.31□□□□□ -0.76
HPS4-205ENST00000429411 UHRF1BP1Q6BDS2 1440 aa10.31□□□□□ -0.76
HPS4-205ENST00000429411 ADGRL2O95490 1459 aa10.31□□□□□ -0.76
HPS4-205ENST00000429411 E9PSI1 815 aa10.31□□□□□ -0.76
HPS4-205ENST00000429411 FRAT2O75474 233 aaPredicted RBP10.31□□□□□ -0.76
HPS4-205ENST00000429411 EIF3AQ14152 1382 aaKnown RBP10.31□□□□□ -0.76
HPS4-205ENST00000429411 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms