RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 KNSTRNQ9Y448 316 aa20.98■□□□□ 0.95
RHBDF1-204ENST00000428730 GPRASP1Q5JY77 1395 aa20.98■□□□□ 0.95
RHBDF1-204ENST00000428730 CCDC144AA2RUR9 1427 aa20.97■□□□□ 0.95
RHBDF1-204ENST00000428730 CANXP27824 592 aaKnown RBP20.97■□□□□ 0.95
RHBDF1-204ENST00000428730 ITSN2Q9NZM3 1697 aa20.96■□□□□ 0.95
RHBDF1-204ENST00000428730 KIAA0556O60303 1618 aa20.96■□□□□ 0.95
RHBDF1-204ENST00000428730 TRAK2O60296 914 aa20.96■□□□□ 0.95
RHBDF1-204ENST00000428730 AMER1Q5JTC6 1135 aaPredicted RBP20.96■□□□□ 0.95
RHBDF1-204ENST00000428730 A2MP01023 1474 aa20.95■□□□□ 0.94
RHBDF1-204ENST00000428730 UPF2Q9HAU5 1272 aaKnown RBP20.95■□□□□ 0.94
RHBDF1-204ENST00000428730 CGNL1Q0VF96 1302 aa20.95■□□□□ 0.94
RHBDF1-204ENST00000428730 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
RHBDF1-204ENST00000428730 ADAMTS12P58397 1594 aa20.94■□□□□ 0.94
RHBDF1-204ENST00000428730 PRDM15P57071 1507 aaPredicted RBP20.94■□□□□ 0.94
RHBDF1-204ENST00000428730 TNNQ9UQP3 1299 aa20.94■□□□□ 0.94
RHBDF1-204ENST00000428730 PTPRGP23470 1445 aa20.94■□□□□ 0.94
RHBDF1-204ENST00000428730 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
RHBDF1-204ENST00000428730 TSPY4P0CV99 314 aa20.93■□□□□ 0.94
RHBDF1-204ENST00000428730 TSPY10P0CW01 314 aa20.93■□□□□ 0.94
RHBDF1-204ENST00000428730 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.94
RHBDF1-204ENST00000428730 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
RHBDF1-204ENST00000428730 PLB1Q6P1J6 1458 aa20.92■□□□□ 0.94
RHBDF1-204ENST00000428730 PCDHB15Q9Y5E8 787 aa20.92■□□□□ 0.94
RHBDF1-204ENST00000428730 WDR7Q9Y4E6 1490 aa20.91■□□□□ 0.94
RHBDF1-204ENST00000428730 ESPNB1AK53 854 aa20.91■□□□□ 0.94
RHBDF1-204ENST00000428730 E9PSI1 815 aa20.91■□□□□ 0.94
RHBDF1-204ENST00000428730 PDZRN3Q9UPQ7 1066 aa20.91■□□□□ 0.94
RHBDF1-204ENST00000428730 MRE11P49959 708 aa20.9■□□□□ 0.94
RHBDF1-204ENST00000428730 GRPEL1Q9HAV7 217 aa20.9■□□□□ 0.94
RHBDF1-204ENST00000428730 CENPJQ9HC77 1338 aaPredicted RBP20.9■□□□□ 0.94
RHBDF1-204ENST00000428730 PDE3AQ14432 1141 aa20.9■□□□□ 0.94
RHBDF1-204ENST00000428730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.9■□□□□ 0.94
RHBDF1-204ENST00000428730 FAM135AQ9P2D6 1515 aa20.89■□□□□ 0.94
RHBDF1-204ENST00000428730 MYH16Q9H6N6 1097 aa20.89■□□□□ 0.93
RHBDF1-204ENST00000428730 PLA2R1Q13018 1463 aa20.88■□□□□ 0.93
RHBDF1-204ENST00000428730 CDC42BPAQ5VT25 1732 aa20.88■□□□□ 0.93
RHBDF1-204ENST00000428730 CLASP1Q7Z460 1538 aa20.88■□□□□ 0.93
RHBDF1-204ENST00000428730 RLBP1P12271 317 aa20.88■□□□□ 0.93
RHBDF1-204ENST00000428730 BCL2L13Q9BXK5 485 aa20.86■□□□□ 0.93
RHBDF1-204ENST00000428730 CHMP5Q9NZZ3 219 aa20.86■□□□□ 0.93
RHBDF1-204ENST00000428730 MFAP1P55081 439 aaKnown RBP20.85■□□□□ 0.93
RHBDF1-204ENST00000428730 SHANK2Q9UPX8 1470 aa20.85■□□□□ 0.93
RHBDF1-204ENST00000428730 ADCY10Q96PN6 1610 aa20.84■□□□□ 0.93
RHBDF1-204ENST00000428730 GAS2L3Q86XJ1 694 aa20.83■□□□□ 0.92
RHBDF1-204ENST00000428730 ABCC10Q5T3U5 1492 aa20.83■□□□□ 0.92
RHBDF1-204ENST00000428730 NEUROD2Q15784 382 aa20.82■□□□□ 0.92
RHBDF1-204ENST00000428730 PIK3C2GO75747 1445 aa20.81■□□□□ 0.92
RHBDF1-204ENST00000428730 C22orf23Q9BZE7 217 aa20.81■□□□□ 0.92
RHBDF1-204ENST00000428730 PMFBP1Q8TBY8 1022 aa20.81■□□□□ 0.92
RHBDF1-204ENST00000428730 RTEL1-TNFRSF6BF6WH68 1400 aa20.81■□□□□ 0.92
RHBDF1-204ENST00000428730 RRP7AQ9Y3A4 280 aaKnown RBP20.8■□□□□ 0.92
RHBDF1-204ENST00000428730 LAMC1P11047 1609 aa20.8■□□□□ 0.92
RHBDF1-204ENST00000428730 TRIM44Q96DX7 344 aaPredicted RBP20.8■□□□□ 0.92
RHBDF1-204ENST00000428730 WWC1Q8IX03 1113 aa20.79■□□□□ 0.92
RHBDF1-204ENST00000428730 ZNF692Q9BU19 519 aaPredicted RBP20.79■□□□□ 0.92
RHBDF1-204ENST00000428730 ABCC2Q92887 1545 aa20.78■□□□□ 0.92
RHBDF1-204ENST00000428730 ASXL1Q8IXJ9 1541 aa20.78■□□□□ 0.92
RHBDF1-204ENST00000428730 RARSP54136 660 aaKnown RBP20.77■□□□□ 0.92
RHBDF1-204ENST00000428730 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
RHBDF1-204ENST00000428730 PLEKHD1A6NEE1 506 aa20.75■□□□□ 0.91
RHBDF1-204ENST00000428730 DDX11L8A8MPP1 907 aa20.75■□□□□ 0.91
RHBDF1-204ENST00000428730 NINLQ9Y2I6 1382 aa20.75■□□□□ 0.91
RHBDF1-204ENST00000428730 MYO5CQ9NQX4 1742 aa20.75■□□□□ 0.91
RHBDF1-204ENST00000428730 CCDC141Q6ZP82 1450 aa20.74■□□□□ 0.91
RHBDF1-204ENST00000428730 HSCBQ8IWL3 235 aa20.73■□□□□ 0.91
RHBDF1-204ENST00000428730 KIAA1211Q6ZU35 1233 aa20.73■□□□□ 0.91
RHBDF1-204ENST00000428730 TNPO1Q92973 898 aaKnown RBP20.72■□□□□ 0.91
RHBDF1-204ENST00000428730 RWDD1Q9H446 243 aaPredicted RBP20.72■□□□□ 0.91
RHBDF1-204ENST00000428730 EIF2AK4Q9P2K8 1649 aaKnown RBP20.71■□□□□ 0.91
RHBDF1-204ENST00000428730 TPM2P07951 284 aa20.7■□□□□ 0.9
RHBDF1-204ENST00000428730 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
RHBDF1-204ENST00000428730 FOXD4L1Q9NU39 408 aa20.69■□□□□ 0.9
RHBDF1-204ENST00000428730 NUP160Q12769 1436 aa20.69■□□□□ 0.9
RHBDF1-204ENST00000428730 RBM10P98175 930 aaKnown RBP20.68■□□□□ 0.9
RHBDF1-204ENST00000428730 SYNMO15061 1565 aa20.68■□□□□ 0.9
RHBDF1-204ENST00000428730 DDIT3P35638 169 aa20.68■□□□□ 0.9
RHBDF1-204ENST00000428730 PDCL3Q9H2J4 239 aa20.68■□□□□ 0.9
RHBDF1-204ENST00000428730 ZMYM3Q14202 1370 aa20.68■□□□□ 0.9
RHBDF1-204ENST00000428730 MAGI1Q96QZ7 1491 aaPredicted RBP20.68■□□□□ 0.9
RHBDF1-204ENST00000428730 PLXNC1O60486 1568 aa20.68■□□□□ 0.9
RHBDF1-204ENST00000428730 RNF17Q9BXT8 1623 aaKnown RBP20.66■□□□□ 0.9
RHBDF1-204ENST00000428730 TNNT2P45379 298 aaPredicted RBP20.66■□□□□ 0.9
RHBDF1-204ENST00000428730 CARD14Q9BXL6 1004 aa20.66■□□□□ 0.9
RHBDF1-204ENST00000428730 ISY1Q9ULR0 285 aaKnown RBP20.66■□□□□ 0.9
RHBDF1-204ENST00000428730 CDCA8Q53HL2 280 aa20.65■□□□□ 0.9
RHBDF1-204ENST00000428730 NCOA3Q9Y6Q9 1424 aa20.64■□□□□ 0.89
RHBDF1-204ENST00000428730 MVPQ14764 893 aaKnown RBP20.63■□□□□ 0.89
RHBDF1-204ENST00000428730 NPC1L1Q9UHC9 1359 aa20.63■□□□□ 0.89
RHBDF1-204ENST00000428730 MYOM1P52179 1685 aa20.63■□□□□ 0.89
RHBDF1-204ENST00000428730 TCP11L2Q8N4U5 519 aa20.63■□□□□ 0.89
RHBDF1-204ENST00000428730 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
RHBDF1-204ENST00000428730 RIPK4P57078 832 aa20.62■□□□□ 0.89
RHBDF1-204ENST00000428730 ARHGEF5Q12774 1597 aa20.61■□□□□ 0.89
RHBDF1-204ENST00000428730 HSP90AB1P08238 724 aaKnown RBP20.61■□□□□ 0.89
RHBDF1-204ENST00000428730 ATP10BO94823 1461 aa20.61■□□□□ 0.89
RHBDF1-204ENST00000428730 CD2BP2O95400 341 aaKnown RBP20.6■□□□□ 0.89
RHBDF1-204ENST00000428730 NASPP49321 788 aaPredicted RBP20.6■□□□□ 0.89
RHBDF1-204ENST00000428730 AAMPQ13685 434 aa20.6■□□□□ 0.89
RHBDF1-204ENST00000428730 RAB3GAP1Q15042 981 aa20.6■□□□□ 0.89
RHBDF1-204ENST00000428730 FTSJ3Q8IY81 847 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms