RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 CHGAP10645 457 aaKnown RBP36.88■■■■□ 3.49
SH3GL3-202ENST00000427482 ADGRF5Q8IZF2 1346 aa36.87■■■■□ 3.49
SH3GL3-202ENST00000427482 SCAF11Q99590 1463 aaKnown RBP36.86■■■■□ 3.49
SH3GL3-202ENST00000427482 RPGRIP1LQ68CZ1 1315 aa36.85■■■■□ 3.49
SH3GL3-202ENST00000427482 ERVK-7P63135 1459 aa36.84■■■■□ 3.49
SH3GL3-202ENST00000427482 MYO5BQ9ULV0 1848 aa36.83■■■■□ 3.49
SH3GL3-202ENST00000427482 TESK2Q96S53 571 aa36.82■■■■□ 3.49
SH3GL3-202ENST00000427482 POLR3GLQ9BT43 218 aa36.82■■■■□ 3.49
SH3GL3-202ENST00000427482 SLC52A1Q9NWF4 448 aa36.82■■■■□ 3.49
SH3GL3-202ENST00000427482 NEXMIFQ5QGS0 1516 aa36.8■■■■□ 3.48
SH3GL3-202ENST00000427482 TMEM131LA2VDJ0 1609 aa36.79■■■■□ 3.48
SH3GL3-202ENST00000427482 PIK3C2GO75747 1445 aa36.78■■■■□ 3.48
SH3GL3-202ENST00000427482 SETBP1Q9Y6X0 1596 aa36.78■■■■□ 3.48
SH3GL3-202ENST00000427482 IDI1Q13907 227 aa36.78■■■■□ 3.48
SH3GL3-202ENST00000427482 CFAP70Q5T0N1 1121 aa36.75■■■■□ 3.47
SH3GL3-202ENST00000427482 SPATA31D1Q6ZQQ2 1576 aa36.75■■■■□ 3.47
SH3GL3-202ENST00000427482 PRKRIP1Q9H875 184 aaPredicted RBP36.73■■■■□ 3.47
SH3GL3-202ENST00000427482 DISP3Q9P2K9 1392 aa36.73■■■■□ 3.47
SH3GL3-202ENST00000427482 FBXO31Q5XUX0 539 aaPredicted RBP36.72■■■■□ 3.47
SH3GL3-202ENST00000427482 MLECQ14165 292 aa36.71■■■■□ 3.47
SH3GL3-202ENST00000427482 EIF3AQ14152 1382 aaKnown RBP36.71■■■■□ 3.47
SH3GL3-202ENST00000427482 TMF1P82094 1093 aa36.69■■■■□ 3.46
SH3GL3-202ENST00000427482 MYO3AQ8NEV4 1616 aa36.67■■■■□ 3.46
SH3GL3-202ENST00000427482 ZFYVE9O95405 1425 aa36.66■■■■□ 3.46
SH3GL3-202ENST00000427482 ADGRB1O14514 1584 aa36.64■■■■□ 3.46
SH3GL3-202ENST00000427482 C14orf93Q9H972 538 aaKnown RBP36.64■■■■□ 3.46
SH3GL3-202ENST00000427482 TRHP20396 242 aaPredicted RBP36.63■■■■□ 3.45
SH3GL3-202ENST00000427482 VGFO15240 615 aaPredicted RBP36.62■■■■□ 3.45
SH3GL3-202ENST00000427482 ESF1Q9H501 851 aaKnown RBP36.57■■■■□ 3.44
SH3GL3-202ENST00000427482 ZMYM3Q14202 1370 aa36.56■■■■□ 3.44
SH3GL3-202ENST00000427482 KDM5AP29375 1690 aaKnown RBP36.52■■■■□ 3.44
SH3GL3-202ENST00000427482 NUTM2DQ5VT03 806 aaPredicted RBP36.52■■■■□ 3.44
SH3GL3-202ENST00000427482 A2ML1A8K2U0 1454 aa36.49■■■■□ 3.43
SH3GL3-202ENST00000427482 CDCA8Q53HL2 280 aa36.49■■■■□ 3.43
SH3GL3-202ENST00000427482 SBNO2Q9Y2G9 1366 aa36.49■■■■□ 3.43
SH3GL3-202ENST00000427482 SLC24A1O60721 1099 aa36.48■■■■□ 3.43
SH3GL3-202ENST00000427482 QRICH2Q9H0J4 1663 aa36.48■■■■□ 3.43
SH3GL3-202ENST00000427482 SCAF1Q9H7N4 1312 aaKnown RBP36.47■■■■□ 3.43
SH3GL3-202ENST00000427482 MYOM1P52179 1685 aa36.47■■■■□ 3.43
SH3GL3-202ENST00000427482 DNAJC5Q9H3Z4 198 aa36.47■■■■□ 3.43
SH3GL3-202ENST00000427482 ARHGEF28Q8N1W1 1705 aaKnown RBP36.46■■■■□ 3.43
SH3GL3-202ENST00000427482 CCDC184Q52MB2 194 aa36.45■■■■□ 3.43
SH3GL3-202ENST00000427482 STAG3Q9UJ98 1225 aa36.45■■■■□ 3.43
SH3GL3-202ENST00000427482 KTN1Q86UP2 1357 aaKnown RBP36.44■■■■□ 3.42
SH3GL3-202ENST00000427482 ASXL1Q8IXJ9 1541 aa36.42■■■■□ 3.42
SH3GL3-202ENST00000427482 TMEM132EQ6IEE7 984 aa36.42■■■■□ 3.42
SH3GL3-202ENST00000427482 PER1O15534 1290 aaPredicted RBP36.41■■■■□ 3.42
SH3GL3-202ENST00000427482 CENPJQ9HC77 1338 aaPredicted RBP36.41■■■■□ 3.42
SH3GL3-202ENST00000427482 MRS2Q9HD23 443 aa36.4■■■■□ 3.42
SH3GL3-202ENST00000427482 TRAK1Q9UPV9 953 aa36.39■■■■□ 3.42
SH3GL3-202ENST00000427482 TNRQ92752 1358 aa36.38■■■■□ 3.41
SH3GL3-202ENST00000427482 FER1L4A9Z1Z3 1794 aa36.38■■■■□ 3.41
SH3GL3-202ENST00000427482 PANK3Q9H999 370 aa36.38■■■■□ 3.41
SH3GL3-202ENST00000427482 RIMS2Q9UQ26 1411 aa36.36■■■■□ 3.41
SH3GL3-202ENST00000427482 RALBP1Q15311 655 aa36.35■■■■□ 3.41
SH3GL3-202ENST00000427482 ALKQ9UM73 1620 aa36.35■■■■□ 3.41
SH3GL3-202ENST00000427482 CNGB1Q14028 1251 aaPredicted RBP36.34■■■■□ 3.41
SH3GL3-202ENST00000427482 C3P01024 1663 aa36.33■■■■□ 3.41
SH3GL3-202ENST00000427482 UBR1Q8IWV7 1749 aa36.32■■■■□ 3.41
SH3GL3-202ENST00000427482 PARD3Q8TEW0 1356 aa36.31■■■■□ 3.4
SH3GL3-202ENST00000427482 GTF3C3Q9Y5Q9 886 aa36.3■■■■□ 3.4
SH3GL3-202ENST00000427482 SETD1AO15047 1707 aaKnown RBP36.29■■■■□ 3.4
SH3GL3-202ENST00000427482 MYBBP1AQ9BQG0 1328 aaKnown RBP36.28■■■■□ 3.4
SH3GL3-202ENST00000427482 NRXN3Q9Y4C0 1643 aa36.23■■■■□ 3.39
SH3GL3-202ENST00000427482 YTHDC2Q9H6S0 1430 aaKnown RBP36.22■■■■□ 3.39
SH3GL3-202ENST00000427482 NLRP1Q9C000 1473 aa36.22■■■■□ 3.39
SH3GL3-202ENST00000427482 BRD4O60885 1362 aaPredicted RBP36.21■■■■□ 3.39
SH3GL3-202ENST00000427482 PTPRMP28827 1452 aa36.2■■■■□ 3.39
SH3GL3-202ENST00000427482 FAM9BQ8IZU0 186 aa36.2■■■■□ 3.38
SH3GL3-202ENST00000427482 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.2■■■■□ 3.38
SH3GL3-202ENST00000427482 SENP3Q9H4L4 574 aaPredicted RBP36.19■■■■□ 3.38
SH3GL3-202ENST00000427482 TULP4Q9NRJ4 1543 aa36.18■■■■□ 3.38
SH3GL3-202ENST00000427482 HNRNPUQ00839 825 aaKnown RBP eCLIP36.18■■■■□ 3.38
SH3GL3-202ENST00000427482 KNSTRNQ9Y448 316 aa36.15■■■■□ 3.38
SH3GL3-202ENST00000427482 CC2D1BQ5T0F9 858 aaKnown RBP36.14■■■■□ 3.38
SH3GL3-202ENST00000427482 CEBPAP49715 358 aaPredicted RBP36.13■■■■□ 3.37
SH3GL3-202ENST00000427482 STK26Q9P289 416 aa36.13■■■■□ 3.37
SH3GL3-202ENST00000427482 TMC1Q8TDI8 760 aa36.13■■■■□ 3.37
SH3GL3-202ENST00000427482 TMEM2Q9UHN6 1383 aa36.12■■■■□ 3.37
SH3GL3-202ENST00000427482 DLC1Q96QB1 1528 aa36.11■■■■□ 3.37
SH3GL3-202ENST00000427482 NLRP13Q86W25 1043 aa36.11■■■■□ 3.37
SH3GL3-202ENST00000427482 HDGFP51858 240 aaKnown RBP36.11■■■■□ 3.37
SH3GL3-202ENST00000427482 PUS7Q96PZ0 661 aaKnown RBP36.11■■■■□ 3.37
SH3GL3-202ENST00000427482 NPC1L1Q9UHC9 1359 aa36.1■■■■□ 3.37
SH3GL3-202ENST00000427482 EVC2Q86UK5 1308 aa36.1■■■■□ 3.37
SH3GL3-202ENST00000427482 AMER1Q5JTC6 1135 aaPredicted RBP36.1■■■■□ 3.37
SH3GL3-202ENST00000427482 PNISRQ8TF01 805 aaKnown RBP36.08■■■■□ 3.37
SH3GL3-202ENST00000427482 LRPPRCP42704 1394 aaKnown RBP36.06■■■■□ 3.36
SH3GL3-202ENST00000427482 KNDC1Q76NI1 1749 aa36.03■■■■□ 3.36
SH3GL3-202ENST00000427482 RIMS1Q86UR5 1692 aaKnown RBP36.02■■■■□ 3.36
SH3GL3-202ENST00000427482 PRAM1Q96QH2 718 aa36.02■■■■□ 3.36
SH3GL3-202ENST00000427482 SAFB2Q14151 953 aaKnown RBP eCLIP36.01■■■■□ 3.35
SH3GL3-202ENST00000427482 POGKQ9P215 609 aa35.99■■■■□ 3.35
SH3GL3-202ENST00000427482 ABCC11Q96J66 1382 aa35.99■■■■□ 3.35
SH3GL3-202ENST00000427482 CARD14Q9BXL6 1004 aa35.99■■■■□ 3.35
SH3GL3-202ENST00000427482 SLIT1O75093 1534 aa35.98■■■■□ 3.35
SH3GL3-202ENST00000427482 USP32Q8NFA0 1604 aa35.97■■■■□ 3.35
SH3GL3-202ENST00000427482 ARHGAP23Q9P227 1491 aa35.96■■■■□ 3.35
SH3GL3-202ENST00000427482 METP08581 1390 aa35.96■■■■□ 3.35
SH3GL3-202ENST00000427482 ADAMTSL3P82987 1691 aa35.96■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms